About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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SCNA-Seq of plasma DNA samples

Low coverage whole genome sequencing for the identification of somatic copy number alterations (SCNA) and focal amplification mapping in plasma DNA of prostate cancer patients

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DUO:0000007
version: 2019-01-07

disease specific research

This data use permission indicates that use is allowed provided it is related to the specified disease.

ModifiersMONDO:0008315

CTC - Plasma-DNA - MONDO:0008315

European Genome-Phenome Archive c/o European Bioinformatics Institute Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SD United Kingdom To whom it may concern, This document refers to datasets specific for MONDO:0008315 which has been submitted to the European Genome Archive (EGA) for the restricted access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by Ellen Heitzer. There are a number of steps that a researcher must take to obtain access to this data and the process is overseen by Ellen Heitzer Ellen Heitzer is a Postdoctoral Fellow and is authorized to approve researchers to have encrypted access to the data submitted to the EGA. Please be advised that Ellen Heitzer (ellen.heitzer@medunigraz.at) is authorized to upload data to the EGA for archiving and distribution as part of your submission process, which will enable approved researchers to have encrypted access to the data. We can confirm that this submission is consistent with the informed consent of the participants of the study or has been granted ethical approval and is in accordance with the applicable laws and regulations. Sincerely, Michael R. Speicher Principle Investigator

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001001018 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00001207670 fastq.gz 390.8 MB Report
EGAF00001207671 fastq.gz 544.9 MB Report
EGAF00001207672 fastq.gz 653.7 MB Report
EGAF00001207673 fastq.gz 698.0 MB Report
EGAF00001207674 fastq.gz 183.5 MB Report
EGAF00001207675 fastq.gz 439.6 MB Report
EGAF00001207676 fastq.gz 540.2 MB Report
EGAF00001207677 fastq.gz 506.4 MB Report
EGAF00001207678 fastq.gz 592.5 MB Report
EGAF00001207679 fastq.gz 727.1 MB Report
EGAF00001207680 fastq.gz 520.9 MB Report
EGAF00001207681 fastq.gz 419.8 MB Report
EGAF00001207682 fastq.gz 629.9 MB Report
EGAF00001207683 fastq.gz 171.3 MB Report
EGAF00001207684 fastq.gz 181.1 MB Report
EGAF00001207685 fastq.gz 1.0 GB Report
EGAF00001207686 fastq.gz 820.6 MB Report
EGAF00001207687 fastq.gz 501.0 MB Report
EGAF00001207688 fastq.gz 397.8 MB Report
EGAF00001207689 fastq.gz 968.3 MB Report
EGAF00001207690 fastq.gz 915.9 MB Report
EGAF00001207691 fastq.gz 275.4 MB Report
EGAF00001207692 fastq.gz 535.1 MB Report
EGAF00001207693 fastq.gz 398.7 MB Report
EGAF00001207694 fastq.gz 576.2 MB Report
EGAF00001207695 fastq.gz 605.2 MB Report
EGAF00001207696 fastq.gz 399.7 MB Report
EGAF00001207697 fastq.gz 570.1 MB Report
EGAF00001207698 fastq.gz 527.3 MB Report
EGAF00001207699 fastq.gz 447.5 MB Report
EGAF00001207700 fastq.gz 340.1 MB Report
EGAF00001207701 fastq.gz 701.5 MB Report
EGAF00001207702 fastq.gz 633.7 MB Report
EGAF00001207703 fastq.gz 598.0 MB Report
EGAF00001207704 fastq.gz 519.7 MB Report
EGAF00001207705 fastq.gz 418.3 MB Report
EGAF00001207706 fastq.gz 476.3 MB Report
EGAF00001207707 fastq.gz 336.2 MB Report
EGAF00001207708 fastq.gz 570.3 MB Report
EGAF00001207709 fastq.gz 544.3 MB Report
EGAF00001207710 fastq.gz 673.5 MB Report
EGAF00001207711 fastq.gz 487.1 MB Report
EGAF00001207712 fastq.gz 466.1 MB Report
EGAF00001207713 fastq.gz 479.9 MB Report
EGAF00001207714 fastq.gz 452.9 MB Report
EGAF00001207715 fastq.gz 383.6 MB Report
EGAF00001207716 fastq.gz 427.1 MB Report
EGAF00001207717 fastq.gz 415.4 MB Report
EGAF00001207718 fastq.gz 582.7 MB Report
EGAF00001207719 fastq.gz 469.9 MB Report
EGAF00001207720 fastq.gz 571.6 MB Report
EGAF00001207721 fastq.gz 1.1 GB Report
EGAF00001207722 fastq.gz 502.7 MB Report
EGAF00001207723 fastq.gz 524.2 MB Report
EGAF00001207724 fastq.gz 394.5 MB Report
EGAF00001207725 fastq.gz 506.9 MB Report
EGAF00001207726 fastq.gz 513.6 MB Report
EGAF00001207727 fastq.gz 603.6 MB Report
EGAF00001207728 fastq.gz 423.4 MB Report
EGAF00001207729 fastq.gz 349 Bytes
EGAF00001207730 fastq.gz 538.7 MB Report
EGAF00001207731 fastq.gz 537.2 MB Report
EGAF00001207732 fastq.gz 492.9 MB Report
EGAF00001207733 fastq.gz 569.1 MB Report
EGAF00001207734 fastq.gz 488.0 MB Report
EGAF00001207735 fastq.gz 518.5 MB Report
EGAF00001207736 fastq.gz 619.6 MB Report
EGAF00001207737 fastq.gz 349 Bytes
EGAF00001207738 fastq.gz 470.3 MB Report
EGAF00001207739 fastq.gz 485.7 MB Report
EGAF00001207740 fastq.gz 628.4 MB Report
EGAF00001207741 fastq.gz 500.0 MB Report
EGAF00001207742 fastq.gz 448.6 MB Report
EGAF00001207743 fastq.gz 359.2 MB Report
EGAF00001207744 fastq.gz 626.9 MB Report
EGAF00001207745 fastq.gz 468.8 MB Report
EGAF00001207746 fastq.gz 502.0 MB Report
EGAF00001207747 fastq.gz 514.8 MB Report
EGAF00001207748 fastq.gz 349 Bytes
EGAF00001207749 fastq.gz 456.1 MB Report
EGAF00001207750 fastq.gz 83.4 MB Report
EGAF00001207751 fastq.gz 382.9 MB Report
EGAF00001207752 fastq.gz 761.0 MB Report
EGAF00001207753 fastq.gz 1.0 GB Report
EGAF00001207754 fastq.gz 366.1 MB Report
EGAF00001207755 fastq.gz 138.9 MB Report
EGAF00001207756 fastq.gz 244.3 MB Report
EGAF00001207757 fastq.gz 660.9 MB Report
EGAF00001207758 fastq.gz 345.1 MB Report
EGAF00001207759 fastq.gz 683.6 MB Report
EGAF00001207760 fastq.gz 514.4 MB Report
EGAF00001207761 fastq.gz 338.6 MB Report
EGAF00001207762 fastq.gz 613.0 MB Report
EGAF00001207763 fastq.gz 644.6 MB Report
EGAF00001207764 fastq.gz 236.8 MB Report
95 Files (47.5 GB)