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Whole genome sequencing of a Grem1 mutant human tumour

The BMP antagonist Grem1 has been shown to be associated with a rare human polyposis syndrome (HMPS). We have shown that there is a 40KB duplication on chrom 15 found in some patients with HMPS. Traditional serrated adenomas (rare sporadic polyps) share some morphological features with HMPS polyps and it has long been hypothesised that they are the sporadic version of HMPS polyps. We have obtained of one of these lesions and in this project we aim to characterise this tumour.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000562 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000611556 cram 4.8 GB
EGAF00000611557 cram 4.6 GB
EGAF00000611558 cram 4.9 GB
EGAF00000611559 cram 2.1 GB
EGAF00000611560 cram 4.8 GB
EGAF00000611561 cram 2.1 GB
EGAF00000611562 cram 2.2 GB
EGAF00000611563 cram 2.2 GB
EGAF00000642336 cram 1.8 GB
EGAF00000642337 cram 1.9 GB
EGAF00000642338 cram 3.7 GB
EGAF00000642339 cram 1.9 GB
EGAF00000642340 cram 2.6 GB
EGAF00000642341 cram 2.8 GB
EGAF00000642342 cram 5.2 GB
EGAF00000642343 cram 2.8 GB
EGAF00000642344 cram 2.6 GB
EGAF00000642345 cram 2.8 GB
EGAF00000642346 cram 5.3 GB
EGAF00000642347 cram 2.8 GB
EGAF00000642348 cram 2.6 GB
EGAF00000642349 cram 2.8 GB
EGAF00000642350 cram 5.3 GB
EGAF00000642351 cram 2.8 GB
EGAF00000642352 cram 2.6 GB
EGAF00000642353 cram 2.8 GB
EGAF00000642354 cram 5.2 GB
EGAF00000642355 cram 2.8 GB
EGAF00000642356 cram 2.6 GB
EGAF00000642357 cram 2.8 GB
EGAF00000642358 cram 5.2 GB
EGAF00000642359 cram 2.7 GB
EGAF00000642360 cram 2.6 GB
EGAF00000642361 cram 2.8 GB
EGAF00000642362 cram 5.2 GB
EGAF00000642363 cram 2.8 GB
EGAF00000642364 cram 2.7 GB
EGAF00000642365 cram 2.9 GB
EGAF00000642366 cram 5.4 GB
EGAF00000642367 cram 2.8 GB
40 Files (131.1 GB)