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Dataset

Blueprint: A human variation panel of genetic influences on epigenomes and transcriptomes in three immune cell types, (RNA-Seq for CD4-positive, alpha-beta T cell, on genome GRCh37)

Dataset ID	Technology	Samples
EGAD00001002671	Illumina HiSeq 2000,Illumina HiSeq 2500	212

Dataset Description

RNA-Seq data for 212 CD4-positive, alpha-beta T cell sample(s). 212 run(s), 212 experiment(s), 212 analysis(s) on human genome GRCh37. Analysis documentation available at http://ftp.ebi.ac.uk/pub/databases/blueprint/blueprint_Epivar/protocols/README_rnaseq_analysis_sanger_20160816

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

Blueprint Data Access Committee
Contact person: Paul Flicek
Email: blueprint-dac [at] ebi [dot] ac [dot] uk
More details: EGAC00001000135

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This dataset is featured in 2 studies

Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID	Study Title	Study Type
EGAS00001000327	BLUEPRINT RNA-seq data for common cells in the haematopoietic lineages, from adult and cord blood samples.	Transcriptome Analysis
EGAS00001000752	BLUEPRINT EpiVar RNA-seq for Naive naive CD4+ T-cells	Other

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Dataset Description

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This dataset is featured in 2 studies

The European Genome-phenome Archive (EGA) is part of the ELIXIR infrastructure.