Dataset

Bam files from Whole exome sequencing (WES, ~50x mean read depth) of metachronous bladder tumors

Dataset ID Technology Samples
EGAD00001002716 Illumina HiSeq 2000 122

Dataset Description

In this study we characterized genomic alterations in two to five metachronous bladder tumors from 29 patients initially diagnosed with early stage disease. Fourteen patients (32 tumors) had non progressive disease (NPD) and 15 patients (34 tumors) had progressive disease (PD). Whole exome sequencing (WES, ~50x mean read depth and whole transcriptome RNA-seq was performed (RNA was not advalible for 4 tumors)
Data provided here consist of 122 Bam files for WES (83 Tumors and 39 blood)

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

MOMA Data Access Committee
Contact person: Søren Vang
Email: vang [at] clin [dot] au [dot] dk
More details: EGAC00001000145

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