Precursor lesions, clonal architecture and relapse in Wilms nephroblastoma
Targeted resequencing at high depth (21 genes, 9 chromosomal regions): at least 4 FFPE samples per case and matched germline DNA: * 100 cases with detailed outcome data, including 15 cases with tumour relapse (515 samples) * 40 cases with matched pre-chemotherapy biopsies (240 samples) * 50 nephrogenic rests matched to above cases (50 samples) We expect a proportion (possibly 10%) of cases to be mutationally silent on the above studies, and propose to subsequently carry out integrated whole-genome, methylome and transcriptome studies on matched frozen tissue from these cases
- 12/03/2017
- 35 samples
- DAC: EGAC00001000000
- Technology: Illumina HiSeq 2500
DUO:0000019 version: 2021-02-23
publication required
This data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.
DUO:0000026 version: 2021-02-23
user specific restriction
This data use modifier indicates that use is limited to use by approved users.
DUO:0000028 version: 2021-02-23
institution specific restriction
This data use modifier indicates that use is limited to use within an approved institution.
DUO:0000042 version: 2021-02-23
general research use
This data use permission indicates that use is allowed for general research use for any research purpose.
Wellcome Trust Sanger Institute Cancer Genome Group Data Sharing Policy
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001001422 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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| EGAF00001218595 | cram | 689.8 MB | Report |
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| EGAF00001218596 | cram | 775.7 MB | Report |
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| EGAF00001218597 | cram | 868.5 MB | Report |
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| EGAF00001218598 | cram | 698.2 MB | Report |
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| EGAF00001218599 | cram | 716.1 MB | Report |
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| EGAF00001218600 | cram | 759.0 MB | Report |
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| EGAF00001218601 | cram | 607.4 MB | Report |
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| EGAF00001218602 | cram | 654.4 MB | Report |
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| EGAF00001218603 | cram | 587.0 MB | Report |
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| EGAF00001218604 | cram | 560.2 MB | Report |
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| EGAF00001218605 | cram | 608.7 MB | Report |
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| EGAF00001218606 | cram | 715.2 MB | Report |
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| EGAF00001218607 | cram | 614.2 MB | Report |
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| EGAF00001218608 | cram | 754.7 MB | Report |
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| EGAF00001218609 | cram | 827.9 MB | Report |
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| EGAF00001218610 | cram | 591.2 MB | Report |
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| EGAF00001218611 | cram | 550.2 MB | Report |
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| EGAF00001218612 | cram | 638.4 MB | Report |
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| EGAF00001218613 | cram | 693.4 MB | Report |
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| EGAF00001218614 | cram | 779.8 MB | Report |
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| EGAF00001218615 | cram | 873.2 MB | Report |
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| EGAF00001218616 | cram | 701.8 MB | Report |
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| EGAF00001218617 | cram | 719.3 MB | Report |
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| EGAF00001218618 | cram | 762.7 MB | Report |
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| EGAF00001218619 | cram | 611.0 MB | Report |
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| EGAF00001218620 | cram | 658.2 MB | Report |
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| EGAF00001218621 | cram | 589.8 MB | Report |
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| EGAF00001218622 | cram | 563.8 MB | Report |
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| EGAF00001218623 | cram | 612.0 MB | Report |
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| EGAF00001218624 | cram | 719.0 MB | Report |
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| EGAF00001218625 | cram | 617.4 MB | Report |
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| EGAF00001218626 | cram | 758.6 MB | Report |
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| EGAF00001218627 | cram | 832.0 MB | Report |
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| EGAF00001218628 | cram | 594.2 MB | Report |
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| EGAF00001218629 | cram | 553.0 MB | Report |
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| EGAF00001218630 | cram | 642.0 MB | Report |
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| EGAF00001218631 | cram | 564.5 MB | Report |
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| EGAF00001218632 | cram | 538.0 MB | Report |
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| EGAF00001218633 | cram | 597.3 MB | Report |
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| EGAF00001218634 | cram | 579.3 MB | Report |
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| EGAF00001218635 | cram | 659.4 MB | Report |
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| EGAF00001218636 | cram | 922.0 MB | Report |
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| EGAF00001218637 | cram | 639.7 MB | Report |
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| EGAF00001218638 | cram | 643.2 MB | Report |
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| EGAF00001218639 | cram | 684.0 MB | Report |
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| EGAF00001218640 | cram | 624.0 MB | Report |
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| EGAF00001218641 | cram | 746.6 MB | Report |
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| EGAF00001218642 | cram | 682.4 MB | Report |
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| EGAF00001218643 | cram | 596.1 MB | Report |
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| EGAF00001218644 | cram | 695.1 MB | Report |
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| EGAF00001218645 | cram | 652.8 MB | Report |
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| EGAF00001218646 | cram | 638.3 MB | Report |
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| EGAF00001218647 | cram | 709.8 MB | Report |
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| EGAF00001218648 | cram | 552.8 MB | Report |
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| EGAF00001218649 | cram | 529.4 MB | Report |
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| EGAF00001218650 | cram | 586.3 MB | Report |
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| EGAF00001218651 | cram | 566.5 MB | Report |
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| EGAF00001218652 | cram | 644.9 MB | Report |
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| EGAF00001218653 | cram | 902.6 MB | Report |
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| EGAF00001218654 | cram | 625.2 MB | Report |
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| EGAF00001218655 | cram | 628.9 MB | Report |
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| EGAF00001218656 | cram | 670.4 MB | Report |
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| EGAF00001218657 | cram | 609.5 MB | Report |
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| EGAF00001218658 | cram | 729.6 MB | Report |
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| EGAF00001218659 | cram | 670.8 MB | Report |
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| EGAF00001218660 | cram | 585.0 MB | Report |
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| EGAF00001218661 | cram | 680.1 MB | Report |
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| EGAF00001218662 | cram | 639.9 MB | Report |
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| EGAF00001218663 | cram | 626.8 MB | Report |
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| EGAF00001218664 | cram | 697.1 MB | Report |
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| 70 Files (46.6 GB) | ||||