Single-cell RNA sequencing on 5063 single T cells from six hepatocellular carcinoma patients

T cells isolated from peripheral blood, tumors and adjacent normal tissues from six hepatocellular carcinoma patients. SmartSeq2 and Tang2009 protocol were used to amplify RNA from single T cells. High depth enables simultaneously expression profiling and TCR assembling.

14/08/2017
5063 samples
DAC: EGAC00001000551
Technologies: Illumina HiSeq 2500, Illumina HiSeq 4000

Access Policy1 Study Files

Metadata

Request Access

Data access policy of sequencing data from BIOPIC, Peking University.The DATA ACCESS AGREEMENT is provided at https://github.com/zhangyybio/single-T-cell-data-access. Applicants can request access to the data by directly downloading it or by sending an email to cancerpku@pku.edu.cn. The process that is used to approve an application includes verifying the institution, participants and research purposes of the application, and the authorization by EGA. In general this process will take about two weeks. In principal, any academic research institutions complying with the laws and bioethic regulation policies of China will be approved.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001002072	Single-cell RNA sequencing on 5063 single T cells isolated from peripheral blood, tumour and adjacent normal tissues from six hepatocellular carcinoma patients.	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00001601839	fq.gz	84.0 MB
EGAF00001601840	fq.gz	88.9 MB
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EGAF00001601842	fq.gz	86.4 MB
EGAF00001601843	fq.gz	138.7 MB
EGAF00001601844	fq.gz	150.0 MB
EGAF00001601845	fq.gz	84.4 MB
EGAF00001601846	fq.gz	90.2 MB
EGAF00001601847	fq.gz	87.6 MB
EGAF00001601848	fq.gz	93.4 MB
EGAF00001601849	fq.gz	106.7 MB
EGAF00001601850	fq.gz	110.2 MB
EGAF00001601851	fq.gz	87.2 MB
EGAF00001601852	fq.gz	96.2 MB
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EGAF00001601854	fq.gz	85.2 MB
EGAF00001601855	fq.gz	329.7 MB
EGAF00001601856	fq.gz	362.1 MB
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EGAF00001601859	fq.gz	86.5 MB
EGAF00001601860	fq.gz	95.4 MB
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EGAF00001601862	fq.gz	118.7 MB
EGAF00001601863	fq.gz	140.2 MB
EGAF00001601864	fq.gz	152.3 MB
EGAF00001601865	fq.gz	105.8 MB
EGAF00001601866	fq.gz	117.7 MB
EGAF00001601867	fq.gz	97.9 MB
EGAF00001601868	fq.gz	105.7 MB
EGAF00001601869	fq.gz	112.3 MB
EGAF00001601870	fq.gz	116.6 MB
EGAF00001601871	fq.gz	116.0 MB
EGAF00001601872	fq.gz	121.7 MB
EGAF00001601873	fq.gz	112.3 MB
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EGAF00001601905	fq.gz	3.9 MB
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EGAF00001601910	fq.gz	90.2 MB
EGAF00001601911	fq.gz	3.6 MB
EGAF00001601912	fq.gz	3.8 MB
EGAF00001601913	fq.gz	78.3 MB
EGAF00001601914	fq.gz	84.5 MB
EGAF00001601915	fq.gz	3.6 MB
EGAF00001601916	fq.gz	3.6 MB
EGAF00001601917	fq.gz	6.0 MB
EGAF00001601918	fq.gz	6.0 MB
EGAF00001601919	fq.gz	7.0 MB
EGAF00001601920	fq.gz	7.4 MB
EGAF00001601921	fq.gz	30.5 MB
EGAF00001601922	fq.gz	34.3 MB
EGAF00001601923	fq.gz	143.3 MB
EGAF00001601924	fq.gz	153.2 MB
EGAF00001601925	fq.gz	113.1 MB
EGAF00001601926	fq.gz	118.8 MB
EGAF00001601927	fq.gz	45.6 MB
EGAF00001601928	fq.gz	49.4 MB
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EGAF00001601930	fq.gz	107.4 MB
EGAF00001601931	fq.gz	60.3 MB
EGAF00001601932	fq.gz	64.0 MB
EGAF00001601933	fq.gz	71.5 MB
EGAF00001601934	fq.gz	76.1 MB
EGAF00001601935	fq.gz	68.6 MB
EGAF00001601936	fq.gz	73.4 MB
EGAF00001601937	fq.gz	103.0 MB
EGAF00001601938	fq.gz	109.1 MB
EGAF00001601939	fq.gz	97.1 MB
EGAF00001601940	fq.gz	102.1 MB
EGAF00001601941	fq.gz	41.3 MB
EGAF00001601942	fq.gz	44.1 MB
EGAF00001601943	fq.gz	53.5 MB
EGAF00001601944	fq.gz	57.0 MB
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EGAF00001601946	fq.gz	119.9 MB
EGAF00001601947	fq.gz	84.5 MB
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EGAF00001601968	fq.gz	81.6 MB
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EGAF00001601971	fq.gz	141.1 MB
EGAF00001601972	fq.gz	148.6 MB
EGAF00001601973	fq.gz	136.4 MB
EGAF00001601974	fq.gz	142.6 MB
EGAF00001601975	fq.gz	135.2 MB
EGAF00001601976	fq.gz	146.7 MB
EGAF00001601977	fq.gz	116.0 MB
EGAF00001601978	fq.gz	124.1 MB
EGAF00001601979	fq.gz	93.4 MB
EGAF00001601980	fq.gz	99.4 MB
EGAF00001601981	fq.gz	121.2 MB
EGAF00001601982	fq.gz	126.4 MB
EGAF00001601983	fq.gz	99.2 MB
EGAF00001601984	fq.gz	105.0 MB
EGAF00001601985	fq.gz	130.5 MB
EGAF00001601986	fq.gz	137.2 MB
EGAF00001601987	fq.gz	100.4 MB
EGAF00001601988	fq.gz	109.3 MB
EGAF00001601989	fq.gz	89.5 MB
EGAF00001601990	fq.gz	94.3 MB
EGAF00001601991	fq.gz	71.7 MB
EGAF00001601992	fq.gz	75.7 MB
EGAF00001601993	fq.gz	62.8 MB
EGAF00001601994	fq.gz	70.9 MB
EGAF00001601995	fq.gz	82.0 MB
EGAF00001601996	fq.gz	85.9 MB
EGAF00001601997	fq.gz	79.0 MB
EGAF00001601998	fq.gz	84.1 MB
EGAF00001601999	fq.gz	129.0 MB
EGAF00001602000	fq.gz	135.0 MB
EGAF00001602001	fq.gz	113.6 MB
EGAF00001602002	fq.gz	119.7 MB
EGAF00001602003	fq.gz	166.2 MB
EGAF00001602004	fq.gz	177.0 MB
EGAF00001602005	fq.gz	60.6 MB
EGAF00001602006	fq.gz	65.3 MB
EGAF00001602007	fq.gz	95.8 MB
EGAF00001602008	fq.gz	104.4 MB
EGAF00001602009	fq.gz	79.2 MB
EGAF00001602010	fq.gz	83.2 MB
EGAF00001602011	fq.gz	151.6 MB
EGAF00001602012	fq.gz	159.9 MB
EGAF00001602013	fq.gz	227.6 MB
EGAF00001602014	fq.gz	241.4 MB
EGAF00001602015	fq.gz	214.4 MB
EGAF00001602016	fq.gz	228.9 MB
EGAF00001602017	fq.gz	24.7 MB
EGAF00001602018	fq.gz	28.7 MB
EGAF00001602019	fq.gz	124.5 MB
EGAF00001602020	fq.gz	132.1 MB
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EGAF00001602025	fq.gz	97.2 MB
EGAF00001602026	fq.gz	102.7 MB
EGAF00001602027	fq.gz	125.0 MB
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EGAF00001602029	fq.gz	90.7 MB
EGAF00001602030	fq.gz	96.0 MB
EGAF00001602031	fq.gz	18.1 MB
EGAF00001602032	fq.gz	21.0 MB
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EGAF00001602037	fq.gz	97.5 MB
EGAF00001602038	fq.gz	104.4 MB
EGAF00001602039	fq.gz	87.4 MB
EGAF00001602040	fq.gz	93.5 MB
EGAF00001602041	fq.gz	95.1 MB
EGAF00001602042	fq.gz	101.6 MB
EGAF00001602043	fq.gz	92.5 MB
EGAF00001602044	fq.gz	100.3 MB
EGAF00001602045	fq.gz	112.8 MB
EGAF00001602046	fq.gz	120.0 MB
EGAF00001602047	fq.gz	138.4 MB
EGAF00001602048	fq.gz	141.9 MB
EGAF00001602049	fq.gz	104.7 MB
EGAF00001602050	fq.gz	111.4 MB
EGAF00001602051	fq.gz	44.3 MB
EGAF00001602052	fq.gz	46.9 MB
EGAF00001602053	fq.gz	67.9 MB
EGAF00001602054	fq.gz	72.3 MB
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EGAF00001602065	fq.gz	118.3 MB
EGAF00001602066	fq.gz	123.8 MB
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EGAF00001602068	fq.gz	99.3 MB
EGAF00001602069	fq.gz	132.4 MB
EGAF00001602070	fq.gz	137.8 MB
EGAF00001602071	fq.gz	91.1 MB
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EGAF00001602075	fq.gz	89.0 MB
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EGAF00001602077	fq.gz	103.6 MB
EGAF00001602078	fq.gz	113.0 MB
EGAF00001602079	fq.gz	93.5 MB
EGAF00001602080	fq.gz	100.1 MB
EGAF00001602081	fq.gz	93.7 MB
EGAF00001602082	fq.gz	100.2 MB
EGAF00001602083	fq.gz	86.2 MB
EGAF00001602084	fq.gz	91.0 MB
EGAF00001602085	fq.gz	97.3 MB
EGAF00001602086	fq.gz	104.1 MB
EGAF00001602087	fq.gz	100.5 MB
EGAF00001602088	fq.gz	106.4 MB
EGAF00001602089	fq.gz	91.2 MB
EGAF00001602090	fq.gz	96.1 MB
EGAF00001602091	fq.gz	100.1 MB
EGAF00001602092	fq.gz	107.9 MB
EGAF00001602093	fq.gz	89.1 MB
EGAF00001602094	fq.gz	93.7 MB
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EGAF00001602096	fq.gz	93.0 MB
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EGAF00001602165	fq.gz	69.4 MB
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EGAF00001602168	fq.gz	89.1 MB
EGAF00001602169	fq.gz	78.4 MB
EGAF00001602170	fq.gz	83.8 MB
EGAF00001602171	fq.gz	127.9 MB
EGAF00001602172	fq.gz	138.4 MB
EGAF00001602173	fq.gz	265.2 MB
EGAF00001602174	fq.gz	281.5 MB
EGAF00001602175	fq.gz	85.4 MB
EGAF00001602176	fq.gz	90.1 MB
EGAF00001602177	fq.gz	155.1 MB
EGAF00001602178	fq.gz	163.0 MB
EGAF00001602179	fq.gz	38.1 MB
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EGAF00001602182	fq.gz	122.2 MB
EGAF00001602183	fq.gz	90.5 MB
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EGAF00001602211	fq.gz	103.2 MB
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EGAF00001602243	fq.gz	74.9 MB
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EGAF00001602245	fq.gz	126.0 MB
EGAF00001602246	fq.gz	132.1 MB
EGAF00001602247	fq.gz	116.1 MB
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EGAF00001621589	fq.gz	94.1 MB
EGAF00001621590	fq.gz	98.2 MB
10126 Files (1.8 TB)