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CNV detection in targeted NGS panel data

We present targeted NGS panel data from 170 samples that were processed using the TruSightTM Cancer (TSC) panel (Illumina, San Diego, CA, USA), which targets 94 genes and 284 SNPs associated with a predisposition towards cancer. The samples are enriched for CNVs in the genes of interest. All CNVs have previously been assessed with MLPA and can therefore be considered as confirmed.

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Data Access Agreement of JKU and MUI for study EGAS00001002481: CNV detection in targeted NGS panel data

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002481 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001676792 fastq.gz 140.1 MB
EGAF00001676793 fastq.gz 149.5 MB
EGAF00001676794 fastq.gz 165.6 MB
EGAF00001676795 fastq.gz 176.2 MB
EGAF00001676796 fastq.gz 144.1 MB
EGAF00001676797 fastq.gz 150.7 MB
EGAF00001676798 fastq.gz 148.4 MB
EGAF00001676799 fastq.gz 156.5 MB
EGAF00001676800 fastq.gz 157.8 MB
EGAF00001676801 fastq.gz 166.6 MB
EGAF00001676802 fastq.gz 191.6 MB
EGAF00001676803 fastq.gz 211.5 MB
EGAF00001676804 fastq.gz 187.1 MB
EGAF00001676805 fastq.gz 190.9 MB
EGAF00001676806 fastq.gz 164.6 MB
EGAF00001676807 fastq.gz 172.8 MB
EGAF00001676808 fastq.gz 164.3 MB
EGAF00001676809 fastq.gz 179.9 MB
EGAF00001676810 fastq.gz 161.1 MB
EGAF00001676811 fastq.gz 168.8 MB
EGAF00001676812 fastq.gz 176.4 MB
EGAF00001676813 fastq.gz 191.7 MB
EGAF00001676814 fastq.gz 164.8 MB
EGAF00001676815 fastq.gz 178.0 MB
EGAF00001676816 fastq.gz 148.1 MB
EGAF00001676817 fastq.gz 164.5 MB
EGAF00001676818 fastq.gz 157.5 MB
EGAF00001676819 fastq.gz 169.1 MB
EGAF00001676820 fastq.gz 174.4 MB
EGAF00001676821 fastq.gz 193.7 MB
EGAF00001676822 fastq.gz 190.4 MB
EGAF00001676823 fastq.gz 194.3 MB
EGAF00001676824 fastq.gz 161.7 MB
EGAF00001676825 fastq.gz 167.5 MB
EGAF00001676826 fastq.gz 149.2 MB
EGAF00001676827 fastq.gz 162.5 MB
EGAF00001676828 fastq.gz 171.7 MB
EGAF00001676829 fastq.gz 188.2 MB
EGAF00001676830 fastq.gz 184.0 MB
EGAF00001676831 fastq.gz 199.8 MB
EGAF00001676832 fastq.gz 215.9 MB
EGAF00001676833 fastq.gz 225.1 MB
EGAF00001676834 fastq.gz 179.4 MB
EGAF00001676835 fastq.gz 182.2 MB
EGAF00001676836 fastq.gz 203.0 MB
EGAF00001676837 fastq.gz 207.6 MB
EGAF00001676838 fastq.gz 210.1 MB
EGAF00001676839 fastq.gz 205.8 MB
EGAF00001676840 fastq.gz 167.6 MB
EGAF00001676841 fastq.gz 177.9 MB
EGAF00001676842 fastq.gz 165.6 MB
EGAF00001676843 fastq.gz 157.6 MB
EGAF00001676844 fastq.gz 218.9 MB
EGAF00001676845 fastq.gz 220.7 MB
EGAF00001676846 fastq.gz 146.3 MB
EGAF00001676847 fastq.gz 162.7 MB
EGAF00001676848 fastq.gz 177.8 MB
EGAF00001676849 fastq.gz 184.9 MB
EGAF00001676850 fastq.gz 173.1 MB
EGAF00001676851 fastq.gz 190.3 MB
EGAF00001676852 fastq.gz 168.3 MB
EGAF00001676853 fastq.gz 180.0 MB
EGAF00001676854 fastq.gz 207.6 MB
EGAF00001676855 fastq.gz 211.0 MB
EGAF00001676856 fastq.gz 185.2 MB
EGAF00001676857 fastq.gz 184.1 MB
EGAF00001676858 fastq.gz 178.0 MB
EGAF00001676859 fastq.gz 186.8 MB
EGAF00001676860 fastq.gz 197.2 MB
EGAF00001676861 fastq.gz 204.7 MB
EGAF00001676862 fastq.gz 237.0 MB
EGAF00001676863 fastq.gz 246.3 MB
EGAF00001676864 fastq.gz 196.4 MB
EGAF00001676865 fastq.gz 206.3 MB
EGAF00001676866 fastq.gz 181.8 MB
EGAF00001676867 fastq.gz 200.3 MB
EGAF00001676868 fastq.gz 149.9 MB
EGAF00001676869 fastq.gz 166.9 MB
EGAF00001676870 fastq.gz 177.3 MB
EGAF00001676871 fastq.gz 185.6 MB
EGAF00001676872 fastq.gz 210.3 MB
EGAF00001676873 fastq.gz 214.5 MB
EGAF00001676874 fastq.gz 140.0 MB
EGAF00001676875 fastq.gz 150.7 MB
EGAF00001676876 fastq.gz 182.6 MB
EGAF00001676877 fastq.gz 191.8 MB
EGAF00001676878 fastq.gz 187.0 MB
EGAF00001676879 fastq.gz 198.4 MB
EGAF00001676880 fastq.gz 193.9 MB
EGAF00001676881 fastq.gz 203.7 MB
EGAF00001676882 fastq.gz 77.1 MB
EGAF00001676883 fastq.gz 78.9 MB
EGAF00001676884 fastq.gz 224.5 MB
EGAF00001676885 fastq.gz 246.5 MB
EGAF00001676886 fastq.gz 215.5 MB
EGAF00001676887 fastq.gz 227.2 MB
EGAF00001676888 fastq.gz 181.3 MB
EGAF00001676889 fastq.gz 187.5 MB
EGAF00001676890 fastq.gz 100.0 MB
EGAF00001676891 fastq.gz 107.6 MB
EGAF00001676892 fastq.gz 141.9 MB
EGAF00001676893 fastq.gz 151.8 MB
EGAF00001676894 fastq.gz 203.4 MB
EGAF00001676895 fastq.gz 212.6 MB
EGAF00001676896 fastq.gz 189.3 MB
EGAF00001676897 fastq.gz 200.1 MB
EGAF00001676898 fastq.gz 175.6 MB
EGAF00001676899 fastq.gz 183.7 MB
EGAF00001676900 fastq.gz 151.5 MB
EGAF00001676901 fastq.gz 149.1 MB
EGAF00001676902 fastq.gz 93.6 MB
EGAF00001676903 fastq.gz 97.6 MB
EGAF00001676904 fastq.gz 161.8 MB
EGAF00001676905 fastq.gz 173.0 MB
EGAF00001676906 fastq.gz 238.0 MB
EGAF00001676907 fastq.gz 247.7 MB
EGAF00001676908 fastq.gz 80.0 MB
EGAF00001676909 fastq.gz 86.1 MB
EGAF00001676910 fastq.gz 106.5 MB
EGAF00001676911 fastq.gz 110.9 MB
EGAF00001676912 fastq.gz 192.9 MB
EGAF00001676913 fastq.gz 203.3 MB
EGAF00001676914 fastq.gz 213.6 MB
EGAF00001676915 fastq.gz 219.7 MB
EGAF00001676916 fastq.gz 196.3 MB
EGAF00001676917 fastq.gz 207.9 MB
EGAF00001676918 fastq.gz 171.8 MB
EGAF00001676919 fastq.gz 176.8 MB
EGAF00001676920 fastq.gz 170.4 MB
EGAF00001676921 fastq.gz 183.8 MB
EGAF00001676922 fastq.gz 128.8 MB
EGAF00001676923 fastq.gz 141.9 MB
EGAF00001676924 fastq.gz 153.0 MB
EGAF00001676925 fastq.gz 165.3 MB
EGAF00001676926 fastq.gz 147.2 MB
EGAF00001676927 fastq.gz 159.2 MB
EGAF00001676928 fastq.gz 163.5 MB
EGAF00001676929 fastq.gz 185.5 MB
EGAF00001676930 fastq.gz 169.4 MB
EGAF00001676931 fastq.gz 183.7 MB
EGAF00001676932 fastq.gz 208.7 MB
EGAF00001676933 fastq.gz 222.2 MB
EGAF00001676934 fastq.gz 142.6 MB
EGAF00001676935 fastq.gz 151.7 MB
EGAF00001676936 fastq.gz 196.2 MB
EGAF00001676937 fastq.gz 207.0 MB
EGAF00001676938 fastq.gz 206.3 MB
EGAF00001676939 fastq.gz 213.2 MB
EGAF00001676940 fastq.gz 174.0 MB
EGAF00001676941 fastq.gz 181.8 MB
EGAF00001676942 fastq.gz 187.8 MB
EGAF00001676943 fastq.gz 192.3 MB
EGAF00001676944 fastq.gz 102.8 MB
EGAF00001676945 fastq.gz 108.0 MB
EGAF00001676946 fastq.gz 180.8 MB
EGAF00001676947 fastq.gz 192.8 MB
EGAF00001676948 fastq.gz 149.2 MB
EGAF00001676949 fastq.gz 171.7 MB
EGAF00001676950 fastq.gz 185.9 MB
EGAF00001676951 fastq.gz 190.9 MB
EGAF00001676952 fastq.gz 160.8 MB
EGAF00001676953 fastq.gz 171.4 MB
EGAF00001676954 fastq.gz 140.6 MB
EGAF00001676955 fastq.gz 148.7 MB
EGAF00001676956 fastq.gz 230.8 MB
EGAF00001676957 fastq.gz 227.6 MB
EGAF00001676958 fastq.gz 123.4 MB
EGAF00001676959 fastq.gz 136.5 MB
EGAF00001676960 fastq.gz 195.5 MB
EGAF00001676961 fastq.gz 200.2 MB
EGAF00001676962 fastq.gz 163.3 MB
EGAF00001676963 fastq.gz 170.0 MB
EGAF00001676964 fastq.gz 187.5 MB
EGAF00001676965 fastq.gz 201.6 MB
EGAF00001676966 fastq.gz 172.1 MB
EGAF00001676967 fastq.gz 188.7 MB
EGAF00001676968 fastq.gz 181.7 MB
EGAF00001676969 fastq.gz 184.1 MB
EGAF00001676970 fastq.gz 192.6 MB
EGAF00001676971 fastq.gz 202.2 MB
EGAF00001676972 fastq.gz 136.7 MB
EGAF00001676973 fastq.gz 148.0 MB
EGAF00001676974 fastq.gz 175.8 MB
EGAF00001676975 fastq.gz 182.2 MB
EGAF00001676976 fastq.gz 169.6 MB
EGAF00001676977 fastq.gz 179.8 MB
EGAF00001676978 fastq.gz 148.5 MB
EGAF00001676979 fastq.gz 158.9 MB
EGAF00001676980 fastq.gz 176.3 MB
EGAF00001676981 fastq.gz 196.7 MB
EGAF00001676982 fastq.gz 177.8 MB
EGAF00001676983 fastq.gz 193.8 MB
EGAF00001676984 fastq.gz 163.5 MB
EGAF00001676985 fastq.gz 158.2 MB
EGAF00001676986 fastq.gz 121.1 MB
EGAF00001676987 fastq.gz 135.1 MB
EGAF00001676988 fastq.gz 224.2 MB
EGAF00001676989 fastq.gz 232.4 MB
EGAF00001676990 fastq.gz 152.0 MB
EGAF00001676991 fastq.gz 161.4 MB
EGAF00001676992 fastq.gz 177.5 MB
EGAF00001676993 fastq.gz 184.9 MB
EGAF00001676994 fastq.gz 155.1 MB
EGAF00001676995 fastq.gz 160.5 MB
EGAF00001676996 fastq.gz 121.5 MB
EGAF00001676997 fastq.gz 132.8 MB
EGAF00001676998 fastq.gz 185.3 MB
EGAF00001676999 fastq.gz 195.6 MB
EGAF00001677000 fastq.gz 130.6 MB
EGAF00001677001 fastq.gz 133.7 MB
EGAF00001677002 fastq.gz 198.4 MB
EGAF00001677003 fastq.gz 207.2 MB
EGAF00001677004 fastq.gz 136.8 MB
EGAF00001677005 fastq.gz 150.6 MB
EGAF00001677006 fastq.gz 202.3 MB
EGAF00001677007 fastq.gz 210.6 MB
EGAF00001677008 fastq.gz 147.6 MB
EGAF00001677009 fastq.gz 158.3 MB
EGAF00001677010 fastq.gz 142.8 MB
EGAF00001677011 fastq.gz 150.6 MB
EGAF00001677012 fastq.gz 165.6 MB
EGAF00001677013 fastq.gz 186.0 MB
EGAF00001677014 fastq.gz 200.9 MB
EGAF00001677015 fastq.gz 213.9 MB
EGAF00001677016 fastq.gz 161.2 MB
EGAF00001677017 fastq.gz 181.6 MB
EGAF00001677018 fastq.gz 127.4 MB
EGAF00001677019 fastq.gz 140.2 MB
EGAF00001677020 fastq.gz 166.6 MB
EGAF00001677021 fastq.gz 165.4 MB
EGAF00001677022 fastq.gz 217.4 MB
EGAF00001677023 fastq.gz 228.8 MB
EGAF00001677024 fastq.gz 150.7 MB
EGAF00001677025 fastq.gz 158.3 MB
EGAF00001677026 fastq.gz 190.5 MB
EGAF00001677027 fastq.gz 195.4 MB
EGAF00001677028 fastq.gz 173.2 MB
EGAF00001677029 fastq.gz 176.3 MB
EGAF00001677030 fastq.gz 135.1 MB
EGAF00001677031 fastq.gz 146.0 MB
EGAF00001677032 fastq.gz 135.7 MB
EGAF00001677033 fastq.gz 147.0 MB
EGAF00001677034 fastq.gz 194.1 MB
EGAF00001677035 fastq.gz 213.3 MB
EGAF00001677036 fastq.gz 215.8 MB
EGAF00001677037 fastq.gz 229.6 MB
EGAF00001677038 fastq.gz 171.8 MB
EGAF00001677039 fastq.gz 176.3 MB
EGAF00001677040 fastq.gz 167.1 MB
EGAF00001677041 fastq.gz 172.8 MB
EGAF00001677042 fastq.gz 166.9 MB
EGAF00001677043 fastq.gz 191.7 MB
EGAF00001677044 fastq.gz 83.5 MB
EGAF00001677045 fastq.gz 82.2 MB
EGAF00001677046 fastq.gz 164.6 MB
EGAF00001677047 fastq.gz 175.9 MB
EGAF00001677048 fastq.gz 170.0 MB
EGAF00001677049 fastq.gz 176.5 MB
EGAF00001677050 fastq.gz 199.8 MB
EGAF00001677051 fastq.gz 205.9 MB
EGAF00001677052 fastq.gz 108.4 MB
EGAF00001677053 fastq.gz 116.9 MB
EGAF00001677054 fastq.gz 182.6 MB
EGAF00001677055 fastq.gz 201.8 MB
EGAF00001677056 fastq.gz 230.8 MB
EGAF00001677057 fastq.gz 242.9 MB
EGAF00001677058 fastq.gz 186.0 MB
EGAF00001677059 fastq.gz 201.4 MB
EGAF00001677060 fastq.gz 193.4 MB
EGAF00001677061 fastq.gz 203.7 MB
EGAF00001677062 fastq.gz 374.0 MB
EGAF00001677063 fastq.gz 374.5 MB
EGAF00001677064 fastq.gz 153.3 MB
EGAF00001677065 fastq.gz 168.8 MB
EGAF00001677066 fastq.gz 155.6 MB
EGAF00001677067 fastq.gz 162.6 MB
EGAF00001677068 fastq.gz 165.4 MB
EGAF00001677069 fastq.gz 177.6 MB
EGAF00001677070 fastq.gz 184.3 MB
EGAF00001677071 fastq.gz 207.6 MB
EGAF00001677072 fastq.gz 205.7 MB
EGAF00001677073 fastq.gz 217.3 MB
EGAF00001677074 fastq.gz 200.7 MB
EGAF00001677075 fastq.gz 221.2 MB
EGAF00001677076 fastq.gz 187.5 MB
EGAF00001677077 fastq.gz 201.1 MB
EGAF00001677078 fastq.gz 159.5 MB
EGAF00001677079 fastq.gz 169.9 MB
EGAF00001677080 fastq.gz 174.5 MB
EGAF00001677081 fastq.gz 186.0 MB
EGAF00001677082 fastq.gz 165.9 MB
EGAF00001677083 fastq.gz 173.5 MB
EGAF00001677084 fastq.gz 214.3 MB
EGAF00001677085 fastq.gz 216.9 MB
EGAF00001677086 fastq.gz 193.3 MB
EGAF00001677087 fastq.gz 204.8 MB
EGAF00001677088 fastq.gz 186.7 MB
EGAF00001677089 fastq.gz 194.1 MB
EGAF00001677090 fastq.gz 225.4 MB
EGAF00001677091 fastq.gz 238.8 MB
EGAF00001677092 fastq.gz 147.9 MB
EGAF00001677093 fastq.gz 156.1 MB
EGAF00001677094 fastq.gz 197.7 MB
EGAF00001677095 fastq.gz 207.4 MB
EGAF00001677096 fastq.gz 160.7 MB
EGAF00001677097 fastq.gz 168.3 MB
EGAF00001677098 fastq.gz 180.5 MB
EGAF00001677099 fastq.gz 186.4 MB
EGAF00001677100 fastq.gz 195.3 MB
EGAF00001677101 fastq.gz 204.8 MB
EGAF00001677102 fastq.gz 192.1 MB
EGAF00001677103 fastq.gz 207.4 MB
EGAF00001677104 fastq.gz 219.0 MB
EGAF00001677105 fastq.gz 233.6 MB
EGAF00001677106 fastq.gz 200.3 MB
EGAF00001677107 fastq.gz 217.2 MB
EGAF00001677108 fastq.gz 202.6 MB
EGAF00001677109 fastq.gz 213.4 MB
EGAF00001677110 fastq.gz 177.5 MB
EGAF00001677111 fastq.gz 186.5 MB
EGAF00001677112 fastq.gz 144.1 MB
EGAF00001677113 fastq.gz 150.3 MB
EGAF00001677114 fastq.gz 161.7 MB
EGAF00001677115 fastq.gz 170.1 MB
EGAF00001677116 fastq.gz 180.1 MB
EGAF00001677117 fastq.gz 190.3 MB
EGAF00001677118 fastq.gz 195.5 MB
EGAF00001677119 fastq.gz 205.6 MB
EGAF00001677120 fastq.gz 200.1 MB
EGAF00001677121 fastq.gz 219.3 MB
EGAF00001677122 fastq.gz 182.3 MB
EGAF00001677123 fastq.gz 195.4 MB
EGAF00001677124 fastq.gz 162.4 MB
EGAF00001677125 fastq.gz 172.8 MB
EGAF00001677126 fastq.gz 170.5 MB
EGAF00001677127 fastq.gz 179.4 MB
EGAF00001677128 fastq.gz 201.1 MB
EGAF00001677129 fastq.gz 224.3 MB
EGAF00001677130 fastq.gz 161.8 MB
EGAF00001677131 fastq.gz 167.9 MB
340 Files (60.8 GB)