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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

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CNV detection in targeted NGS panel data

We present targeted NGS panel data from 170 samples that were processed using the TruSightTM Cancer (TSC) panel (Illumina, San Diego, CA, USA), which targets 94 genes and 284 SNPs associated with a predisposition towards cancer. The samples are enriched for CNVs in the genes of interest. All CNVs have previously been assessed with MLPA and can therefore be considered as confirmed.

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Data Access Agreement of JKU and MUI for study EGAS00001002481: CNV detection in targeted NGS panel data

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002481 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00001676792 fastq.gz 140.1 MB Report
EGAF00001676793 fastq.gz 149.5 MB Report
EGAF00001676794 fastq.gz 165.6 MB Report
EGAF00001676795 fastq.gz 176.2 MB Report
EGAF00001676796 fastq.gz 144.1 MB Report
EGAF00001676797 fastq.gz 150.7 MB Report
EGAF00001676798 fastq.gz 148.4 MB Report
EGAF00001676799 fastq.gz 156.5 MB Report
EGAF00001676800 fastq.gz 157.8 MB Report
EGAF00001676801 fastq.gz 166.6 MB Report
EGAF00001676802 fastq.gz 191.6 MB Report
EGAF00001676803 fastq.gz 211.5 MB Report
EGAF00001676804 fastq.gz 187.1 MB Report
EGAF00001676805 fastq.gz 190.9 MB Report
EGAF00001676806 fastq.gz 164.6 MB Report
EGAF00001676807 fastq.gz 172.8 MB Report
EGAF00001676808 fastq.gz 164.3 MB Report
EGAF00001676809 fastq.gz 179.9 MB Report
EGAF00001676810 fastq.gz 161.1 MB Report
EGAF00001676811 fastq.gz 168.8 MB Report
EGAF00001676812 fastq.gz 176.4 MB Report
EGAF00001676813 fastq.gz 191.7 MB Report
EGAF00001676814 fastq.gz 164.8 MB Report
EGAF00001676815 fastq.gz 178.0 MB Report
EGAF00001676816 fastq.gz 148.1 MB Report
EGAF00001676817 fastq.gz 164.5 MB Report
EGAF00001676818 fastq.gz 157.5 MB Report
EGAF00001676819 fastq.gz 169.1 MB Report
EGAF00001676820 fastq.gz 174.4 MB Report
EGAF00001676821 fastq.gz 193.7 MB Report
EGAF00001676822 fastq.gz 190.4 MB Report
EGAF00001676823 fastq.gz 194.3 MB Report
EGAF00001676824 fastq.gz 161.7 MB Report
EGAF00001676825 fastq.gz 167.5 MB Report
EGAF00001676826 fastq.gz 149.2 MB Report
EGAF00001676827 fastq.gz 162.5 MB Report
EGAF00001676828 fastq.gz 171.7 MB Report
EGAF00001676829 fastq.gz 188.2 MB Report
EGAF00001676830 fastq.gz 184.0 MB Report
EGAF00001676831 fastq.gz 199.8 MB Report
EGAF00001676832 fastq.gz 215.9 MB Report
EGAF00001676833 fastq.gz 225.1 MB Report
EGAF00001676834 fastq.gz 179.4 MB Report
EGAF00001676835 fastq.gz 182.2 MB Report
EGAF00001676836 fastq.gz 203.0 MB Report
EGAF00001676837 fastq.gz 207.6 MB Report
EGAF00001676838 fastq.gz 210.1 MB Report
EGAF00001676839 fastq.gz 205.8 MB Report
EGAF00001676840 fastq.gz 167.6 MB Report
EGAF00001676841 fastq.gz 177.9 MB Report
EGAF00001676842 fastq.gz 165.6 MB Report
EGAF00001676843 fastq.gz 157.6 MB Report
EGAF00001676844 fastq.gz 218.9 MB Report
EGAF00001676845 fastq.gz 220.7 MB Report
EGAF00001676846 fastq.gz 146.3 MB Report
EGAF00001676847 fastq.gz 162.7 MB Report
EGAF00001676848 fastq.gz 177.8 MB Report
EGAF00001676849 fastq.gz 184.9 MB Report
EGAF00001676850 fastq.gz 173.1 MB Report
EGAF00001676851 fastq.gz 190.3 MB Report
EGAF00001676852 fastq.gz 168.3 MB Report
EGAF00001676853 fastq.gz 180.0 MB Report
EGAF00001676854 fastq.gz 207.6 MB Report
EGAF00001676855 fastq.gz 211.0 MB Report
EGAF00001676856 fastq.gz 185.2 MB Report
EGAF00001676857 fastq.gz 184.1 MB Report
EGAF00001676858 fastq.gz 178.0 MB Report
EGAF00001676859 fastq.gz 186.8 MB Report
EGAF00001676860 fastq.gz 197.2 MB Report
EGAF00001676861 fastq.gz 204.7 MB Report
EGAF00001676862 fastq.gz 237.0 MB Report
EGAF00001676863 fastq.gz 246.3 MB Report
EGAF00001676864 fastq.gz 196.4 MB Report
EGAF00001676865 fastq.gz 206.3 MB Report
EGAF00001676866 fastq.gz 181.8 MB Report
EGAF00001676867 fastq.gz 200.3 MB Report
EGAF00001676868 fastq.gz 149.9 MB Report
EGAF00001676869 fastq.gz 166.9 MB Report
EGAF00001676870 fastq.gz 177.3 MB Report
EGAF00001676871 fastq.gz 185.6 MB Report
EGAF00001676872 fastq.gz 210.3 MB Report
EGAF00001676873 fastq.gz 214.5 MB Report
EGAF00001676874 fastq.gz 140.0 MB Report
EGAF00001676875 fastq.gz 150.7 MB Report
EGAF00001676876 fastq.gz 182.6 MB Report
EGAF00001676877 fastq.gz 191.8 MB Report
EGAF00001676878 fastq.gz 187.0 MB Report
EGAF00001676879 fastq.gz 198.4 MB Report
EGAF00001676880 fastq.gz 193.9 MB Report
EGAF00001676881 fastq.gz 203.7 MB Report
EGAF00001676882 fastq.gz 77.1 MB Report
EGAF00001676883 fastq.gz 78.9 MB Report
EGAF00001676884 fastq.gz 224.5 MB Report
EGAF00001676885 fastq.gz 246.5 MB Report
EGAF00001676886 fastq.gz 215.5 MB Report
EGAF00001676887 fastq.gz 227.2 MB Report
EGAF00001676888 fastq.gz 181.3 MB Report
EGAF00001676889 fastq.gz 187.5 MB Report
EGAF00001676890 fastq.gz 100.0 MB Report
EGAF00001676891 fastq.gz 107.6 MB Report
EGAF00001676892 fastq.gz 141.9 MB Report
EGAF00001676893 fastq.gz 151.8 MB Report
EGAF00001676894 fastq.gz 203.4 MB Report
EGAF00001676895 fastq.gz 212.6 MB Report
EGAF00001676896 fastq.gz 189.3 MB Report
EGAF00001676897 fastq.gz 200.1 MB Report
EGAF00001676898 fastq.gz 175.6 MB Report
EGAF00001676899 fastq.gz 183.7 MB Report
EGAF00001676900 fastq.gz 151.5 MB Report
EGAF00001676901 fastq.gz 149.1 MB Report
EGAF00001676902 fastq.gz 93.6 MB Report
EGAF00001676903 fastq.gz 97.6 MB Report
EGAF00001676904 fastq.gz 161.8 MB Report
EGAF00001676905 fastq.gz 173.0 MB Report
EGAF00001676906 fastq.gz 238.0 MB Report
EGAF00001676907 fastq.gz 247.7 MB Report
EGAF00001676908 fastq.gz 80.0 MB Report
EGAF00001676909 fastq.gz 86.1 MB Report
EGAF00001676910 fastq.gz 106.5 MB Report
EGAF00001676911 fastq.gz 110.9 MB Report
EGAF00001676912 fastq.gz 192.9 MB Report
EGAF00001676913 fastq.gz 203.3 MB Report
EGAF00001676914 fastq.gz 213.6 MB Report
EGAF00001676915 fastq.gz 219.7 MB Report
EGAF00001676916 fastq.gz 196.3 MB Report
EGAF00001676917 fastq.gz 207.9 MB Report
EGAF00001676918 fastq.gz 171.8 MB Report
EGAF00001676919 fastq.gz 176.8 MB Report
EGAF00001676920 fastq.gz 170.4 MB Report
EGAF00001676921 fastq.gz 183.8 MB Report
EGAF00001676922 fastq.gz 128.8 MB Report
EGAF00001676923 fastq.gz 141.9 MB Report
EGAF00001676924 fastq.gz 153.0 MB Report
EGAF00001676925 fastq.gz 165.3 MB Report
EGAF00001676926 fastq.gz 147.2 MB Report
EGAF00001676927 fastq.gz 159.2 MB Report
EGAF00001676928 fastq.gz 163.5 MB Report
EGAF00001676929 fastq.gz 185.5 MB Report
EGAF00001676930 fastq.gz 169.4 MB Report
EGAF00001676931 fastq.gz 183.7 MB Report
EGAF00001676932 fastq.gz 208.7 MB Report
EGAF00001676933 fastq.gz 222.2 MB Report
EGAF00001676934 fastq.gz 142.6 MB Report
EGAF00001676935 fastq.gz 151.7 MB Report
EGAF00001676936 fastq.gz 196.2 MB Report
EGAF00001676937 fastq.gz 207.0 MB Report
EGAF00001676938 fastq.gz 206.3 MB Report
EGAF00001676939 fastq.gz 213.2 MB Report
EGAF00001676940 fastq.gz 174.0 MB Report
EGAF00001676941 fastq.gz 181.8 MB Report
EGAF00001676942 fastq.gz 187.8 MB Report
EGAF00001676943 fastq.gz 192.3 MB Report
EGAF00001676944 fastq.gz 102.8 MB Report
EGAF00001676945 fastq.gz 108.0 MB Report
EGAF00001676946 fastq.gz 180.8 MB Report
EGAF00001676947 fastq.gz 192.8 MB Report
EGAF00001676948 fastq.gz 149.2 MB Report
EGAF00001676949 fastq.gz 171.7 MB Report
EGAF00001676950 fastq.gz 185.9 MB Report
EGAF00001676951 fastq.gz 190.9 MB Report
EGAF00001676952 fastq.gz 160.8 MB Report
EGAF00001676953 fastq.gz 171.4 MB Report
EGAF00001676954 fastq.gz 140.6 MB Report
EGAF00001676955 fastq.gz 148.7 MB Report
EGAF00001676956 fastq.gz 230.8 MB Report
EGAF00001676957 fastq.gz 227.6 MB Report
EGAF00001676958 fastq.gz 123.4 MB Report
EGAF00001676959 fastq.gz 136.5 MB Report
EGAF00001676960 fastq.gz 195.5 MB Report
EGAF00001676961 fastq.gz 200.2 MB Report
EGAF00001676962 fastq.gz 163.3 MB Report
EGAF00001676963 fastq.gz 170.0 MB Report
EGAF00001676964 fastq.gz 187.5 MB Report
EGAF00001676965 fastq.gz 201.6 MB Report
EGAF00001676966 fastq.gz 172.1 MB Report
EGAF00001676967 fastq.gz 188.7 MB Report
EGAF00001676968 fastq.gz 181.7 MB Report
EGAF00001676969 fastq.gz 184.1 MB Report
EGAF00001676970 fastq.gz 192.6 MB Report
EGAF00001676971 fastq.gz 202.2 MB Report
EGAF00001676972 fastq.gz 136.7 MB Report
EGAF00001676973 fastq.gz 148.0 MB Report
EGAF00001676974 fastq.gz 175.8 MB Report
EGAF00001676975 fastq.gz 182.2 MB Report
EGAF00001676976 fastq.gz 169.6 MB Report
EGAF00001676977 fastq.gz 179.8 MB Report
EGAF00001676978 fastq.gz 148.5 MB Report
EGAF00001676979 fastq.gz 158.9 MB Report
EGAF00001676980 fastq.gz 176.3 MB Report
EGAF00001676981 fastq.gz 196.7 MB Report
EGAF00001676982 fastq.gz 177.8 MB Report
EGAF00001676983 fastq.gz 193.8 MB Report
EGAF00001676984 fastq.gz 163.5 MB Report
EGAF00001676985 fastq.gz 158.2 MB Report
EGAF00001676986 fastq.gz 121.1 MB Report
EGAF00001676987 fastq.gz 135.1 MB Report
EGAF00001676988 fastq.gz 224.2 MB Report
EGAF00001676989 fastq.gz 232.4 MB Report
EGAF00001676990 fastq.gz 152.0 MB Report
EGAF00001676991 fastq.gz 161.4 MB Report
EGAF00001676992 fastq.gz 177.5 MB Report
EGAF00001676993 fastq.gz 184.9 MB Report
EGAF00001676994 fastq.gz 155.1 MB Report
EGAF00001676995 fastq.gz 160.5 MB Report
EGAF00001676996 fastq.gz 121.5 MB Report
EGAF00001676997 fastq.gz 132.8 MB Report
EGAF00001676998 fastq.gz 185.3 MB Report
EGAF00001676999 fastq.gz 195.6 MB Report
EGAF00001677000 fastq.gz 130.6 MB Report
EGAF00001677001 fastq.gz 133.7 MB Report
EGAF00001677002 fastq.gz 198.4 MB Report
EGAF00001677003 fastq.gz 207.2 MB Report
EGAF00001677004 fastq.gz 136.8 MB Report
EGAF00001677005 fastq.gz 150.6 MB Report
EGAF00001677006 fastq.gz 202.3 MB Report
EGAF00001677007 fastq.gz 210.6 MB Report
EGAF00001677008 fastq.gz 147.6 MB Report
EGAF00001677009 fastq.gz 158.3 MB Report
EGAF00001677010 fastq.gz 142.8 MB Report
EGAF00001677011 fastq.gz 150.6 MB Report
EGAF00001677012 fastq.gz 165.6 MB Report
EGAF00001677013 fastq.gz 186.0 MB Report
EGAF00001677014 fastq.gz 200.9 MB Report
EGAF00001677015 fastq.gz 213.9 MB Report
EGAF00001677016 fastq.gz 161.2 MB Report
EGAF00001677017 fastq.gz 181.6 MB Report
EGAF00001677018 fastq.gz 127.4 MB Report
EGAF00001677019 fastq.gz 140.2 MB Report
EGAF00001677020 fastq.gz 166.6 MB Report
EGAF00001677021 fastq.gz 165.4 MB Report
EGAF00001677022 fastq.gz 217.4 MB Report
EGAF00001677023 fastq.gz 228.8 MB Report
EGAF00001677024 fastq.gz 150.7 MB Report
EGAF00001677025 fastq.gz 158.3 MB Report
EGAF00001677026 fastq.gz 190.5 MB Report
EGAF00001677027 fastq.gz 195.4 MB Report
EGAF00001677028 fastq.gz 173.2 MB Report
EGAF00001677029 fastq.gz 176.3 MB Report
EGAF00001677030 fastq.gz 135.1 MB Report
EGAF00001677031 fastq.gz 146.0 MB Report
EGAF00001677032 fastq.gz 135.7 MB Report
EGAF00001677033 fastq.gz 147.0 MB Report
EGAF00001677034 fastq.gz 194.1 MB Report
EGAF00001677035 fastq.gz 213.3 MB Report
EGAF00001677036 fastq.gz 215.8 MB Report
EGAF00001677037 fastq.gz 229.6 MB Report
EGAF00001677038 fastq.gz 171.8 MB Report
EGAF00001677039 fastq.gz 176.3 MB Report
EGAF00001677040 fastq.gz 167.1 MB Report
EGAF00001677041 fastq.gz 172.8 MB Report
EGAF00001677042 fastq.gz 166.9 MB Report
EGAF00001677043 fastq.gz 191.7 MB Report
EGAF00001677044 fastq.gz 83.5 MB Report
EGAF00001677045 fastq.gz 82.2 MB Report
EGAF00001677046 fastq.gz 164.6 MB Report
EGAF00001677047 fastq.gz 175.9 MB Report
EGAF00001677048 fastq.gz 170.0 MB Report
EGAF00001677049 fastq.gz 176.5 MB Report
EGAF00001677050 fastq.gz 199.8 MB Report
EGAF00001677051 fastq.gz 205.9 MB Report
EGAF00001677052 fastq.gz 108.4 MB Report
EGAF00001677053 fastq.gz 116.9 MB Report
EGAF00001677054 fastq.gz 182.6 MB Report
EGAF00001677055 fastq.gz 201.8 MB Report
EGAF00001677056 fastq.gz 230.8 MB Report
EGAF00001677057 fastq.gz 242.9 MB Report
EGAF00001677058 fastq.gz 186.0 MB Report
EGAF00001677059 fastq.gz 201.4 MB Report
EGAF00001677060 fastq.gz 193.4 MB Report
EGAF00001677061 fastq.gz 203.7 MB Report
EGAF00001677062 fastq.gz 374.0 MB Report
EGAF00001677063 fastq.gz 374.5 MB Report
EGAF00001677064 fastq.gz 153.3 MB Report
EGAF00001677065 fastq.gz 168.8 MB Report
EGAF00001677066 fastq.gz 155.6 MB Report
EGAF00001677067 fastq.gz 162.6 MB Report
EGAF00001677068 fastq.gz 165.4 MB Report
EGAF00001677069 fastq.gz 177.6 MB Report
EGAF00001677070 fastq.gz 184.3 MB Report
EGAF00001677071 fastq.gz 207.6 MB Report
EGAF00001677072 fastq.gz 205.7 MB Report
EGAF00001677073 fastq.gz 217.3 MB Report
EGAF00001677074 fastq.gz 200.7 MB Report
EGAF00001677075 fastq.gz 221.2 MB Report
EGAF00001677076 fastq.gz 187.5 MB Report
EGAF00001677077 fastq.gz 201.1 MB Report
EGAF00001677078 fastq.gz 159.5 MB Report
EGAF00001677079 fastq.gz 169.9 MB Report
EGAF00001677080 fastq.gz 174.5 MB Report
EGAF00001677081 fastq.gz 186.0 MB Report
EGAF00001677082 fastq.gz 165.9 MB Report
EGAF00001677083 fastq.gz 173.5 MB Report
EGAF00001677084 fastq.gz 214.3 MB Report
EGAF00001677085 fastq.gz 216.9 MB Report
EGAF00001677086 fastq.gz 193.3 MB Report
EGAF00001677087 fastq.gz 204.8 MB Report
EGAF00001677088 fastq.gz 186.7 MB Report
EGAF00001677089 fastq.gz 194.1 MB Report
EGAF00001677090 fastq.gz 225.4 MB Report
EGAF00001677091 fastq.gz 238.8 MB Report
EGAF00001677092 fastq.gz 147.9 MB Report
EGAF00001677093 fastq.gz 156.1 MB Report
EGAF00001677094 fastq.gz 197.7 MB Report
EGAF00001677095 fastq.gz 207.4 MB Report
EGAF00001677096 fastq.gz 160.7 MB Report
EGAF00001677097 fastq.gz 168.3 MB Report
EGAF00001677098 fastq.gz 180.5 MB Report
EGAF00001677099 fastq.gz 186.4 MB Report
EGAF00001677100 fastq.gz 195.3 MB Report
EGAF00001677101 fastq.gz 204.8 MB Report
EGAF00001677102 fastq.gz 192.1 MB Report
EGAF00001677103 fastq.gz 207.4 MB Report
EGAF00001677104 fastq.gz 219.0 MB Report
EGAF00001677105 fastq.gz 233.6 MB Report
EGAF00001677106 fastq.gz 200.3 MB Report
EGAF00001677107 fastq.gz 217.2 MB Report
EGAF00001677108 fastq.gz 202.6 MB Report
EGAF00001677109 fastq.gz 213.4 MB Report
EGAF00001677110 fastq.gz 177.5 MB Report
EGAF00001677111 fastq.gz 186.5 MB Report
EGAF00001677112 fastq.gz 144.1 MB Report
EGAF00001677113 fastq.gz 150.3 MB Report
EGAF00001677114 fastq.gz 161.7 MB Report
EGAF00001677115 fastq.gz 170.1 MB Report
EGAF00001677116 fastq.gz 180.1 MB Report
EGAF00001677117 fastq.gz 190.3 MB Report
EGAF00001677118 fastq.gz 195.5 MB Report
EGAF00001677119 fastq.gz 205.6 MB Report
EGAF00001677120 fastq.gz 200.1 MB Report
EGAF00001677121 fastq.gz 219.3 MB Report
EGAF00001677122 fastq.gz 182.3 MB Report
EGAF00001677123 fastq.gz 195.4 MB Report
EGAF00001677124 fastq.gz 162.4 MB Report
EGAF00001677125 fastq.gz 172.8 MB Report
EGAF00001677126 fastq.gz 170.5 MB Report
EGAF00001677127 fastq.gz 179.4 MB Report
EGAF00001677128 fastq.gz 201.1 MB Report
EGAF00001677129 fastq.gz 224.3 MB Report
EGAF00001677130 fastq.gz 161.8 MB Report
EGAF00001677131 fastq.gz 167.9 MB Report
340 Files (60.8 GB)