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Aligned reads in the 2kb region centered on the HTT repeat expansion from Illumina HiSeqX and HiSeq2000 whole genome sequence data

This dataset includes bam files from 58 samples. These bam files include all read pairs where at least one of the reads aligns within 1kb of the HTT repeat expansion. These samples were sequenced using 2x150bp reads on an Illumina HiSeqX sequencer and aligned using bwa. Twelve of the samples used TruSeq Nano library preparation and 46 samples used TruSeq DNA PCR-free sample preparation.

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Venezuela HTT repeat expansions Data Access Policy

Access to the Venezuela HTT repeat expansion NGS data is available by emailing application to the data access committee and will be granted to qualified investigators for appropriate use.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002593 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001707675 bam 199.6 kB
EGAF00001707676 bam 252.4 kB
EGAF00001707677 bam 206.6 kB
EGAF00001707678 bam 228.8 kB
EGAF00001707679 bam 174.7 kB
EGAF00001707680 bam 201.2 kB
EGAF00001707681 bam 347.1 kB
EGAF00001707682 bam 158.9 kB
EGAF00001707683 bam 193.8 kB
EGAF00001707684 bam 222.7 kB
EGAF00001707685 bam 182.2 kB
EGAF00001707686 bam 175.9 kB
EGAF00001707687 bam 226.7 kB
EGAF00001707688 bam 163.7 kB
EGAF00001707689 bam 228.9 kB
EGAF00001707690 bam 187.2 kB
EGAF00001707691 bam 183.2 kB
EGAF00001707692 bam 205.2 kB
EGAF00001707693 bam 206.6 kB
EGAF00001707694 bam 249.1 kB
EGAF00001707695 bam 204.6 kB
EGAF00001707696 bam 234.4 kB
EGAF00001707697 bam 206.4 kB
EGAF00001707698 bam 185.5 kB
EGAF00001707699 bam 175.3 kB
EGAF00001707700 bam 172.7 kB
EGAF00001707701 bam 219.3 kB
EGAF00001707702 bam 205.1 kB
EGAF00001707703 bam 225.5 kB
EGAF00001707704 bam 189.1 kB
EGAF00001707705 bam 297.3 kB
EGAF00001707706 bam 191.9 kB
EGAF00001707707 bam 197.0 kB
EGAF00001707708 bam 165.3 kB
EGAF00001707709 bam 197.0 kB
EGAF00001707710 bam 195.5 kB
EGAF00001707711 bam 185.3 kB
EGAF00001707712 bam 237.3 kB
EGAF00001707713 bam 204.1 kB
EGAF00001707714 bam 167.4 kB
EGAF00001707715 bam 216.4 kB
EGAF00001707716 bam 173.4 kB
EGAF00001707717 bam 237.1 kB
EGAF00001707718 bam 171.8 kB
EGAF00001707719 bam 289.3 kB
EGAF00001707720 bam 214.1 kB
EGAF00001707721 bam 216.3 kB
EGAF00001707722 bam 320.7 kB
EGAF00001707723 bam 219.7 kB
EGAF00001707724 bam 256.1 kB
EGAF00001707725 bam 169.8 kB
EGAF00001707726 bam 178.5 kB
EGAF00001707727 bam 172.3 kB
EGAF00001707728 bam 250.9 kB
EGAF00001707729 bam 217.2 kB
EGAF00001707730 bam 206.5 kB
EGAF00001707731 bam 153.9 kB
EGAF00001707732 bam 225.2 kB
58 Files (12.1 MB)