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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Cholangiocarcinoma whole genome sequencing data 12 samples

This dataset contains whole genome sequencing FASTQ data for 12 cholangiocarcinoma tumor samples, and their matched normal samples. These 12 samples are in addition to 59 samples available in dataset EGAD00001001988, and consist of patients from Thailand, Romania, and Singapore. Paired-end sequencing data was generated by Illumina Hiseq 2000 and 2500, with insert sizes of 170 and 350.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001001653 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00001778294 fastq.gz 14.8 GB Report
EGAF00001778295 fastq.gz 15.1 GB Report
EGAF00001778296 fastq.gz 15.3 GB Report
EGAF00001778297 fastq.gz 15.6 GB Report
EGAF00001778298 fastq.gz 15.0 GB Report
EGAF00001778299 fastq.gz 15.3 GB Report
EGAF00001778300 fastq.gz 16.0 GB Report
EGAF00001778301 fastq.gz 16.2 GB Report
EGAF00001778302 fastq.gz 15.7 GB Report
EGAF00001778303 fastq.gz 16.0 GB Report
EGAF00001778304 fastq.gz 16.4 GB Report
EGAF00001778305 fastq.gz 16.7 GB Report
EGAF00001778306 fastq.gz 16.4 GB Report
EGAF00001778307 fastq.gz 16.7 GB Report
EGAF00001778308 fastq.gz 15.9 GB Report
EGAF00001778309 fastq.gz 16.1 GB Report
EGAF00001778310 fastq.gz 24.9 GB Report
EGAF00001778311 fastq.gz 23.6 GB Report
EGAF00001794376 fastq.gz 20.8 GB Report
EGAF00001794377 fastq.gz 21.0 GB Report
EGAF00001794378 fastq.gz 40.7 GB Report
EGAF00001794379 fastq.gz 40.4 GB Report
EGAF00001794380 fastq.gz 20.5 GB Report
EGAF00001794381 fastq.gz 20.5 GB Report
EGAF00001794382 fastq.gz 38.2 GB Report
EGAF00001794383 fastq.gz 38.3 GB Report
EGAF00001794384 fastq.gz 20.2 GB Report
EGAF00001794385 fastq.gz 20.4 GB Report
EGAF00001794386 fastq.gz 19.0 GB Report
EGAF00001794387 fastq.gz 19.0 GB Report
EGAF00001794388 fastq.gz 18.8 GB Report
EGAF00001794389 fastq.gz 19.1 GB Report
EGAF00001794390 fastq.gz 53.7 GB Report
EGAF00001794391 fastq.gz 53.3 GB Report
EGAF00001794392 fastq.gz 21.2 GB Report
EGAF00001794393 fastq.gz 21.4 GB Report
EGAF00001794394 fastq.gz 60.4 GB Report
EGAF00001794395 fastq.gz 60.0 GB Report
EGAF00001795291 fastq.gz 20.2 GB Report
EGAF00001795292 fastq.gz 20.3 GB Report
EGAF00001795293 fastq.gz 19.7 GB Report
EGAF00001795294 fastq.gz 19.8 GB Report
EGAF00001795295 fastq.gz 19.7 GB Report
EGAF00001795296 fastq.gz 19.7 GB Report
EGAF00001795297 fastq.gz 19.6 GB Report
EGAF00001795298 fastq.gz 19.6 GB Report
EGAF00001795299 fastq.gz 2.1 GB Report
EGAF00001795300 fastq.gz 2.1 GB Report
EGAF00001795301 fastq.gz 2.2 GB Report
EGAF00001795302 fastq.gz 2.1 GB Report
EGAF00001795303 fastq.gz 2.1 GB Report
EGAF00001795304 fastq.gz 2.1 GB Report
EGAF00001795305 fastq.gz 2.1 GB Report
EGAF00001795306 fastq.gz 2.1 GB Report
EGAF00001795307 fastq.gz 18.1 GB Report
EGAF00001795308 fastq.gz 18.1 GB Report
EGAF00001795309 fastq.gz 17.9 GB Report
EGAF00001795310 fastq.gz 18.0 GB Report
EGAF00001795311 fastq.gz 18.0 GB Report
EGAF00001795312 fastq.gz 18.1 GB Report
EGAF00001795313 fastq.gz 18.5 GB Report
EGAF00001795314 fastq.gz 18.7 GB Report
EGAF00001795315 fastq.gz 22.5 GB Report
EGAF00001795316 fastq.gz 22.7 GB Report
EGAF00001795317 fastq.gz 66.2 GB Report
EGAF00001795318 fastq.gz 66.3 GB Report
EGAF00001795319 fastq.gz 22.4 GB Report
EGAF00001795320 fastq.gz 22.6 GB Report
EGAF00001795321 fastq.gz 56.7 GB Report
EGAF00001795322 fastq.gz 56.7 GB Report
EGAF00001795323 fastq.gz 18.4 GB Report
EGAF00001795324 fastq.gz 18.9 GB Report
EGAF00001795325 fastq.gz 18.1 GB Report
EGAF00001795326 fastq.gz 18.6 GB Report
EGAF00001795327 fastq.gz 21.3 GB Report
EGAF00001795328 fastq.gz 21.8 GB Report
EGAF00001795329 fastq.gz 21.2 GB Report
EGAF00001795330 fastq.gz 21.8 GB Report
EGAF00001795331 fastq.gz 16.8 GB Report
EGAF00001795332 fastq.gz 17.2 GB Report
EGAF00001795333 fastq.gz 17.9 GB Report
EGAF00001795334 fastq.gz 18.3 GB Report
EGAF00001795335 fastq.gz 20.0 GB Report
EGAF00001795336 fastq.gz 20.4 GB Report
EGAF00001795337 fastq.gz 19.5 GB Report
EGAF00001795338 fastq.gz 20.0 GB Report
EGAF00001796682 fastq.gz 20.9 GB Report
EGAF00001796683 fastq.gz 21.1 GB Report
EGAF00001796684 fastq.gz 57.4 GB Report
EGAF00001796685 fastq.gz 58.2 GB Report
EGAF00001796686 fastq.gz 22.3 GB Report
EGAF00001796687 fastq.gz 22.5 GB Report
EGAF00001796688 fastq.gz 62.7 GB Report
EGAF00001796689 fastq.gz 63.5 GB Report
EGAF00001796690 fastq.gz 19.9 GB Report
EGAF00001796691 fastq.gz 20.7 GB Report
EGAF00001796692 fastq.gz 20.2 GB Report
EGAF00001796693 fastq.gz 21.0 GB Report
EGAF00001796694 fastq.gz 22.6 GB Report
EGAF00001796695 fastq.gz 23.6 GB Report
EGAF00001796696 fastq.gz 22.6 GB Report
EGAF00001796697 fastq.gz 23.6 GB Report
EGAF00001796698 fastq.gz 18.8 GB Report
EGAF00001796699 fastq.gz 19.5 GB Report
EGAF00001796700 fastq.gz 18.4 GB Report
EGAF00001796701 fastq.gz 19.1 GB Report
EGAF00001796702 fastq.gz 21.5 GB Report
EGAF00001796703 fastq.gz 22.3 GB Report
EGAF00001796704 fastq.gz 21.3 GB Report
EGAF00001796705 fastq.gz 22.1 GB Report
EGAF00001796706 fastq.gz 10.4 GB Report
EGAF00001796707 fastq.gz 10.4 GB Report
EGAF00001796708 fastq.gz 20.6 GB Report
EGAF00001796709 fastq.gz 20.7 GB Report
EGAF00001796710 fastq.gz 60.8 GB Report
EGAF00001796711 fastq.gz 60.7 GB Report
EGAF00001796712 fastq.gz 7.9 GB Report
EGAF00001796713 fastq.gz 7.8 GB Report
EGAF00001796714 fastq.gz 21.2 GB Report
EGAF00001796715 fastq.gz 21.3 GB Report
EGAF00001796716 fastq.gz 61.7 GB Report
EGAF00001796717 fastq.gz 61.7 GB Report
EGAF00001796912 fastq.gz 19.6 GB Report
EGAF00001796913 fastq.gz 19.1 GB Report
EGAF00001796914 fastq.gz 20.9 GB Report
EGAF00001796915 fastq.gz 21.3 GB Report
EGAF00001796916 fastq.gz 22.1 GB Report
EGAF00001796917 fastq.gz 22.6 GB Report
EGAF00001796918 fastq.gz 22.6 GB Report
EGAF00001796919 fastq.gz 23.1 GB Report
EGAF00001796920 fastq.gz 20.6 GB Report
EGAF00001796921 fastq.gz 21.1 GB Report
EGAF00001796922 fastq.gz 20.5 GB Report
EGAF00001796923 fastq.gz 21.1 GB Report
EGAF00001796924 fastq.gz 23.4 GB Report
EGAF00001796925 fastq.gz 24.0 GB Report
EGAF00001796926 fastq.gz 23.2 GB Report
EGAF00001796927 fastq.gz 23.8 GB Report
EGAF00001796928 fastq.gz 19.4 GB Report
EGAF00001796929 fastq.gz 19.5 GB Report
EGAF00001796930 fastq.gz 55.7 GB Report
EGAF00001796931 fastq.gz 55.9 GB Report
EGAF00001796932 fastq.gz 19.3 GB Report
EGAF00001796933 fastq.gz 19.4 GB Report
EGAF00001796934 fastq.gz 56.6 GB Report
EGAF00001796935 fastq.gz 56.6 GB Report
EGAF00001796936 fastq.gz 20.1 GB Report
EGAF00001796937 fastq.gz 20.2 GB Report
EGAF00001796938 fastq.gz 20.4 GB Report
EGAF00001796939 fastq.gz 20.4 GB Report
EGAF00001796940 fastq.gz 20.2 GB Report
EGAF00001796941 fastq.gz 20.3 GB Report
EGAF00001796942 fastq.gz 21.3 GB Report
EGAF00001796943 fastq.gz 21.4 GB Report
EGAF00001796944 fastq.gz 17.1 GB Report
EGAF00001796945 fastq.gz 17.2 GB Report
EGAF00001796946 fastq.gz 17.4 GB Report
EGAF00001796947 fastq.gz 17.4 GB Report
EGAF00001796948 fastq.gz 17.4 GB Report
EGAF00001796949 fastq.gz 17.5 GB Report
EGAF00001796950 fastq.gz 17.7 GB Report
EGAF00001796951 fastq.gz 17.8 GB Report
162 Files (3.9 TB)