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Angiopredict Whole genome Shallow Sequencing

Shallow sequencing of metastatic colorectal cancer samples for the Angiopredict and Nobev cohorts described in: van Dijk et al., JCO, in revision

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Data originating from patient samples

The Amsterdam UMC, tumor genome analysis core, allows access to published datasets upon written application and signature of a Data Access Agreement (DAA). In addition, applications to clinical datasets require approval by a Data Access Committee (DAC), who assess whether the proposed work is allowed given patient consent, as well as the scientific purpose. To aid this process we ask you to provide the information below. Requests will be prioritised according to novelty of the research question. Applications with insufficient detail on objectives, justification, and methods/planned analyses are unlikely to be accepted. 1.Reference number for the dataset 2.Full legal name and address of university/institution 3.Name(s) of the Principle Investigator who will use the data: 4.Name(s) and job title(s) of any other investigators who will use the data: 5.Please provide a minimum of one reference to a publication that can be found on PubMed and where the Principle Investigator is an author: 6.How will the data be stored and where will it be stored? 7.What is the proposed study title and what are the objectives and outcomes of the study in which the data will be used 8.Please provide a brief justification or rationale for the proposed study (max 250 words) 9.Please provide a brief description of planned data analyses (max 250 words): 10.Will the results arising from use of the data be used for the creation of products for sale or for any commercial purpose?

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002724 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00001882811 bam 245.3 MB Report
EGAF00001882842 bam 493.3 MB Report
EGAF00001882843 bam 708.6 MB Report
EGAF00001882844 bam 606.3 MB Report
EGAF00001882845 bam 406.1 MB Report
EGAF00001882846 bam 559.0 MB Report
EGAF00001882847 bam 520.7 MB Report
EGAF00001882848 bam 623.8 MB Report
EGAF00001882849 bam 795.6 MB Report
EGAF00001882850 bam 447.2 MB Report
EGAF00001882851 bam 869.2 MB Report
EGAF00001882852 bam 636.2 MB Report
EGAF00001882853 bam 192.9 MB Report
EGAF00001882854 bam 154.8 MB Report
EGAF00001882855 bam 147.1 MB Report
EGAF00001882856 bam 285.1 MB Report
EGAF00001882857 bam 225.8 MB Report
EGAF00001882858 bam 746.1 MB Report
EGAF00001882859 bam 213.1 MB Report
EGAF00001882860 bam 370.9 MB Report
EGAF00001882861 bam 979.1 MB Report
EGAF00001882862 bam 151.5 MB Report
EGAF00001882863 bam 426.2 MB Report
EGAF00001882864 bam 166.9 MB Report
EGAF00001882865 bam 289.9 MB Report
EGAF00001882866 bam 182.1 MB Report
EGAF00001882867 bam 1.2 GB Report
EGAF00001882868 bam 795.2 MB Report
EGAF00001882869 bam 1.0 GB Report
EGAF00001882870 bam 1.1 GB Report
EGAF00001882871 bam 770.4 MB Report
EGAF00001882872 bam 269.4 MB Report
EGAF00001882873 bam 241.3 MB Report
EGAF00001882874 bam 475.9 MB Report
EGAF00001882875 bam 526.6 MB Report
EGAF00001882876 bam 312.5 MB Report
EGAF00001882877 bam 414.9 MB Report
EGAF00001882878 bam 160.1 MB Report
EGAF00001882879 bam 631.4 MB Report
EGAF00001882880 bam 475.7 MB Report
EGAF00001882881 bam 926.8 MB Report
EGAF00001882882 bam 241.0 MB Report
EGAF00001882883 bam 285.0 MB Report
EGAF00001882884 bam 1.5 GB Report
EGAF00001882885 bam 298.0 MB Report
EGAF00001882886 bam 605.7 MB Report
EGAF00001882887 bam 655.1 MB Report
EGAF00001882888 bam 468.6 MB Report
EGAF00001882889 bam 1.9 GB Report
EGAF00001882890 bam 580.5 MB Report
EGAF00001882891 bam 664.1 MB Report
EGAF00001882892 bam 451.3 MB Report
EGAF00001882893 bam 574.2 MB Report
EGAF00001882894 bam 218.9 MB Report
EGAF00001882895 bam 650.3 MB Report
EGAF00001882896 bam 470.4 MB Report
EGAF00001882897 bam 957.0 MB Report
EGAF00001882898 bam 277.4 MB Report
EGAF00001882899 bam 414.0 MB Report
EGAF00001882900 bam 238.9 MB Report
EGAF00001882901 bam 432.1 MB Report
EGAF00001882902 bam 443.4 MB Report
EGAF00001882903 bam 449.1 MB Report
EGAF00001882904 bam 1.1 GB Report
EGAF00001882905 bam 350.0 MB Report
EGAF00001882906 bam 719.7 MB Report
EGAF00001882907 bam 510.0 MB Report
EGAF00001882908 bam 713.3 MB Report
EGAF00001882909 bam 1.2 GB Report
EGAF00001882910 bam 674.3 MB Report
EGAF00001882911 bam 682.9 MB Report
EGAF00001882912 bam 269.2 MB Report
EGAF00001882913 bam 322.7 MB Report
EGAF00001882914 bam 742.5 MB Report
EGAF00001882915 bam 718.5 MB Report
EGAF00001882916 bam 317.3 MB Report
EGAF00001882917 bam 458.9 MB Report
EGAF00001882918 bam 780.6 MB Report
EGAF00001882919 bam 579.7 MB Report
EGAF00001882920 bam 361.0 MB Report
EGAF00001882921 bam 985.0 MB Report
EGAF00001882922 bam 218.4 MB Report
EGAF00001882923 bam 358.2 MB Report
EGAF00001882924 bam 882.8 MB Report
EGAF00001882925 bam 365.2 MB Report
EGAF00001882926 bam 455.2 MB Report
EGAF00001882927 bam 561.1 MB Report
EGAF00001882928 bam 662.8 MB Report
EGAF00001882929 bam 378.7 MB Report
EGAF00001882930 bam 1.2 MB Report
EGAF00001882931 bam 180.8 MB Report
EGAF00001882932 bam 254.5 MB Report
EGAF00001882933 bam 1.6 GB Report
EGAF00001882934 bam 585.6 MB Report
EGAF00001882935 bam 464.4 MB Report
EGAF00001882936 bam 578.2 MB Report
EGAF00001882937 bam 49.1 MB Report
EGAF00001882938 bam 522.9 MB Report
EGAF00001882939 bam 266.0 MB Report
EGAF00001882940 bam 562.5 MB Report
EGAF00001882941 bam 501.7 MB Report
EGAF00001882942 bam 657.4 MB Report
EGAF00001882943 bam 128.5 MB Report
EGAF00001882944 bam 526.8 MB Report
EGAF00001882945 bam 363.8 MB Report
EGAF00001882946 bam 645.4 MB Report
EGAF00001882947 bam 352.7 MB Report
EGAF00001882948 bam 1.2 MB Report
EGAF00001882949 bam 382.9 MB Report
EGAF00001882950 bam 1.1 GB Report
EGAF00001882951 bam 348.1 MB Report
EGAF00001882952 bam 850.0 MB Report
EGAF00001882953 bam 660.7 MB Report
EGAF00001882954 bam 544.0 MB Report
EGAF00001882955 bam 984.8 MB Report
EGAF00001882956 bam 584.3 MB Report
EGAF00001882957 bam 564.8 MB Report
EGAF00001882958 bam 738.8 MB Report
EGAF00001882959 bam 458.7 MB Report
EGAF00001882960 bam 274.4 MB Report
EGAF00001882961 bam 15.8 MB Report
EGAF00001882962 bam 569.0 MB Report
EGAF00001882963 bam 437.6 MB Report
EGAF00001882964 bam 2.2 MB Report
EGAF00001882965 bam 836.8 MB Report
EGAF00001882966 bam 226.6 MB Report
EGAF00001882967 bam 472.7 MB Report
EGAF00001882968 bam 617.6 MB Report
EGAF00001882969 bam 218.8 MB Report
EGAF00001882970 bam 193.4 MB Report
EGAF00001882971 bam 737.7 MB Report
EGAF00001882972 bam 197.5 MB Report
EGAF00001882973 bam 490.9 MB Report
EGAF00001882974 bam 989.4 MB Report
EGAF00001882975 bam 599.5 MB Report
EGAF00001882976 bam 179.2 MB Report
EGAF00001882977 bam 593.9 MB Report
EGAF00001882978 bam 754.8 MB Report
EGAF00001882979 bam 284.7 MB Report
EGAF00001882980 bam 578.7 MB Report
EGAF00001882981 bam 284.0 MB Report
EGAF00001882982 bam 510.4 MB Report
EGAF00001882983 bam 153.6 MB Report
EGAF00001882984 bam 205.9 MB Report
EGAF00001882985 bam 663.5 MB Report
EGAF00001882986 bam 527.7 MB Report
EGAF00001882987 bam 722.0 MB Report
EGAF00001882988 bam 588.7 MB Report
EGAF00001882989 bam 620.1 MB Report
EGAF00001882990 bam 546.5 MB Report
EGAF00001882991 bam 576.9 MB Report
EGAF00001882992 bam 530.6 MB Report
EGAF00001882993 bam 289.4 MB Report
EGAF00001882994 bam 548.7 MB Report
EGAF00001882995 bam 494.1 MB Report
EGAF00001882996 bam 469.2 MB Report
EGAF00001882997 bam 585.5 MB Report
EGAF00001882998 bam 428.1 MB Report
EGAF00001882999 bam 630.4 MB Report
EGAF00001883000 bam 534.8 MB Report
EGAF00001883001 bam 511.4 MB Report
EGAF00001883002 bam 575.1 MB Report
EGAF00001883003 bam 571.2 MB Report
EGAF00001883004 bam 609.9 MB Report
EGAF00001883005 bam 435.8 MB Report
EGAF00001883006 bam 430.3 MB Report
EGAF00001883007 bam 482.5 MB Report
EGAF00001883008 bam 578.2 MB Report
EGAF00001883009 bam 403.8 MB Report
EGAF00001883010 bam 529.7 MB Report
EGAF00001883011 bam 900.3 MB Report
EGAF00001883012 bam 804.7 MB Report
EGAF00001883013 bam 664.2 MB Report
EGAF00001883014 bam 601.1 MB Report
EGAF00001883015 bam 390.5 MB Report
EGAF00001883016 bam 560.6 MB Report
EGAF00001883017 bam 717.4 MB Report
EGAF00001883018 bam 579.0 MB Report
EGAF00001883019 bam 531.3 MB Report
EGAF00001883020 bam 669.5 MB Report
EGAF00001883021 bam 506.7 MB Report
EGAF00001883022 bam 607.5 MB Report
EGAF00001883023 bam 459.4 MB Report
EGAF00001883024 bam 1.0 GB Report
EGAF00001883025 bam 650.4 MB Report
EGAF00001883026 bam 480.9 MB Report
186 Files (98.7 GB)