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Cancer gene panel (T200.1) sequencing analysis of adult type ovarian granulosa cell tumors (Validation cohort from Hillman, et al)

Cancer gene panel (T200.1) sequencing data from tumor/normal pairs for adult type ovarian granulosa cell tumor sequencing project. This data set contains 55 tumor panel sequencing data and 44 matched normal panel sequencing data generated using the MD Anderson Cancer Center T200.1 cancer gene hybrid capture platform, with sequencing performed on an Illumina HiSeq 2000. This dataset contains BAM files generated by aligning paired-end reads to the hg19 reference genome.

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UNIVERSITY OF TEXAS MD ANDERSON CANCER CENTER DEPARTMENT OF GENOMIC MEDICINE - DATA ACCESS AGREEMENT

This agreement discloses the conditions under which any human genomic, proteomic, and immune profiling Data generated by the University of Texas Department of Genomic Medicine is to be accessed from public databases such as dbGAP and EGA. By signing this agreement, you, the User and Associates (collaborators, staff scientists, and trainees) agree to abide by the terms and conditions of data access set out in this agreement. Terms and Conditions: 1. The Data is to be used for research only including analyses of somatic, germline, structural variants, differential expression patterns, and immune infiltrates. 2. The Data is to be stored in an appropriate password-protected computational infrastructure monitored by your institutional information technology group. 3. You, as the User, are a laboratory head, principal investigator and take responsibility for the distribution, use, storage, and management of the Data in question. 4. You, the User and any collaborators, staff scientists, and trainees are to be co-signees of an IRB-protocol for the use of this data. The IRB protocol number should be referenced in the Materials Transfers Agreement. 5. The Materials Transfers Agreement should also state the purpose and goal of the Data usage. 6. You may use the Data for research that could result in intellectual property or commercial product. 7. Confidentiality of Data Subjects will be preserved by you the User and Associates. 8. The accession number of the study under which the Data is received should be incorporated and referenced appropriately in any publication that results from use of the Data. 9. Any breach of this agreement will result in termination and immediate permanent deletion of Data. The Data is subject to international laws.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002833 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00001997718 bam 6.8 GB Report
EGAF00001997719 bam 7.7 GB Report
EGAF00001997720 bam 7.6 GB Report
EGAF00001997721 bam 4.7 GB Report
EGAF00001997722 bam 4.9 GB Report
EGAF00001997723 bam 9.9 GB Report
EGAF00001997724 bam 6.0 GB Report
EGAF00001997725 bam 6.6 GB Report
EGAF00001997726 bam 8.3 GB Report
EGAF00001997727 bam 8.1 GB Report
EGAF00001997728 bam 6.6 GB Report
EGAF00001997729 bam 8.3 GB Report
EGAF00001997730 bam 7.0 GB Report
EGAF00001997731 bam 7.8 GB Report
EGAF00001997732 bam 7.8 GB Report
EGAF00001997733 bam 8.5 GB Report
EGAF00001997734 bam 6.0 GB Report
EGAF00001997735 bam 6.8 GB Report
EGAF00001997736 bam 7.4 GB Report
EGAF00001997737 bam 7.1 GB Report
EGAF00001997738 bam 6.9 GB Report
EGAF00001997739 bam 5.9 GB Report
EGAF00001997740 bam 7.1 GB Report
EGAF00001997741 bam 8.0 GB Report
EGAF00001997742 bam 7.7 GB Report
EGAF00001997743 bam 8.4 GB Report
EGAF00001997744 bam 7.7 GB Report
EGAF00001997745 bam 6.8 GB Report
EGAF00001997746 bam 7.4 GB Report
EGAF00001997747 bam 7.6 GB Report
EGAF00001997748 bam 7.8 GB Report
EGAF00001997749 bam 7.0 GB Report
EGAF00001997750 bam 7.0 GB Report
EGAF00001997751 bam 6.0 GB Report
EGAF00001997752 bam 7.3 GB Report
EGAF00001997753 bam 5.8 GB Report
EGAF00001997754 bam 9.0 GB Report
EGAF00001997755 bam 8.9 GB Report
EGAF00001997756 bam 7.3 GB Report
EGAF00001997757 bam 8.0 GB Report
EGAF00001997758 bam 8.2 GB Report
EGAF00001997759 bam 7.5 GB Report
EGAF00001997760 bam 7.6 GB Report
EGAF00001997761 bam 7.2 GB Report
EGAF00001997762 bam 7.1 GB Report
EGAF00001997763 bam 7.4 GB Report
EGAF00001997764 bam 7.5 GB Report
EGAF00001997765 bam 5.6 GB Report
EGAF00001997766 bam 6.9 GB Report
EGAF00001997767 bam 7.4 GB Report
EGAF00001997768 bam 6.5 GB Report
EGAF00001997769 bam 6.9 GB Report
EGAF00001997770 bam 6.5 GB Report
EGAF00001997771 bam 8.0 GB Report
EGAF00001997772 bam 4.3 GB Report
EGAF00001997773 bam 4.2 GB Report
EGAF00001997774 bam 8.0 GB Report
EGAF00001997775 bam 4.5 GB Report
EGAF00001997776 bam 6.8 GB Report
EGAF00001997777 bam 8.2 GB Report
EGAF00001997778 bam 8.2 GB Report
EGAF00001997779 bam 7.0 GB Report
EGAF00001997780 bam 6.9 GB Report
EGAF00001997781 bam 7.1 GB Report
EGAF00001997782 bam 7.7 GB Report
EGAF00001997783 bam 7.6 GB Report
EGAF00001997784 bam 8.0 GB Report
EGAF00001997785 bam 6.9 GB Report
EGAF00001997786 bam 7.8 GB Report
EGAF00001997787 bam 5.6 GB Report
EGAF00001997788 bam 8.5 GB Report
EGAF00001997789 bam 7.3 GB Report
EGAF00001997790 bam 7.3 GB Report
EGAF00001997791 bam 7.6 GB Report
EGAF00001997792 bam 7.9 GB Report
EGAF00001997793 bam 7.5 GB Report
EGAF00001997794 bam 7.2 GB Report
EGAF00001997795 bam 6.4 GB Report
EGAF00001997796 bam 8.3 GB Report
EGAF00001997797 bam 7.2 GB Report
EGAF00001997798 bam 4.5 GB Report
EGAF00001997799 bam 4.1 GB Report
EGAF00001997800 bam 6.3 GB Report
EGAF00001997801 bam 7.7 GB Report
EGAF00001997802 bam 7.4 GB Report
EGAF00001997803 bam 7.3 GB Report
EGAF00001997804 bam 7.1 GB Report
EGAF00001997805 bam 7.8 GB Report
EGAF00001997806 bam 7.3 GB Report
EGAF00001997807 bam 6.1 GB Report
EGAF00001997808 bam 6.5 GB Report
EGAF00001997809 bam 7.7 GB Report
EGAF00001997810 bam 6.5 GB Report
EGAF00001997811 bam 6.7 GB Report
EGAF00001997812 bam 6.0 GB Report
EGAF00001997813 bam 8.4 GB Report
EGAF00001997814 bam 6.2 GB Report
EGAF00001997815 bam 7.9 GB Report
EGAF00001997816 bam 7.7 GB Report
99 Files (704.8 GB)