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Mutational consequences of precancerous liver disease

Clonally expanded liver adult stem cell clones of healthy liver and cirrhotic liver (due to alcohol abuse, NASH and PSC), as well as biopsies of liver cancers were subjected to whole genome sequencing to determine the mutational impact of precancerous liver disease

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DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

Data access policy Department of Biomedical Genetics of UMC Utrecht

The Data Access Committee of the Department of Biomedical Genetics of UMC Utrecht (DAC-DGB-UMCU) governs data access to genomic datasets and accompanying metadata via a two-step access request procedure. Access to data will only be granted to qualified users for appropriate use. Step 1: contact the DAC-DBG-UMCU at DACDBG@umcutrecht.nl, providing a brief summary of your research proposal and the requested datasets. Your proposal will be reviewed based on the necessity of the requested dataset to answer the specific research question. Step 2: The DAC will request additional documentation to complete your application. The DAC-DBG-UMCU will decide if data access is permitted by evaluating the feasibility of the project, the scientific profile of the applicant(s), and whether the relevant ethical approvals justify the proposed research. Only unanimous voting results in acceptation of the request.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002983 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00001999508 bam 60.8 GB Report
EGAF00001999509 bam 64.3 GB Report
EGAF00001999510 bam 65.1 GB Report
EGAF00001999511 bam 56.8 GB Report
EGAF00001999512 bam 70.5 GB Report
EGAF00001999513 bam 72.5 GB Report
EGAF00001999514 bam 66.3 GB Report
EGAF00001999515 bam 67.9 GB Report
EGAF00001999516 bam 66.5 GB Report
EGAF00001999517 bam 62.1 GB Report
EGAF00001999518 bam 56.9 GB Report
EGAF00001999519 bam 60.0 GB Report
EGAF00001999520 bam 85.8 GB Report
EGAF00001999521 bam 67.3 GB Report
EGAF00001999522 bam 76.7 GB Report
EGAF00001999523 bam 68.6 GB Report
EGAF00001999524 bam 70.8 GB Report
EGAF00001999525 bam 64.2 GB Report
EGAF00001999526 bam 58.0 GB Report
EGAF00001999527 bam 72.5 GB Report
EGAF00001999528 bam 70.8 GB Report
EGAF00001999529 bam 103.5 GB Report
EGAF00001999530 bam 64.9 GB Report
EGAF00001999531 bam 87.3 GB Report
EGAF00001999532 bam 65.8 GB Report
EGAF00001999533 bam 61.0 GB Report
EGAF00001999534 bam 55.4 GB Report
EGAF00001999535 bam 111.1 GB Report
EGAF00001999536 bam 114.8 GB Report
EGAF00001999537 bam 149.8 GB Report
EGAF00001999538 bam 131.7 GB Report
EGAF00001999539 bam 125.0 GB Report
EGAF00002144957 bam 1.2 GB Report
EGAF00002144958 bam 1.2 GB Report
EGAF00002144959 bam 1.1 GB Report
EGAF00002144960 bam 1.3 GB Report
EGAF00002144961 bam 1.3 GB Report
EGAF00002144962 bam 1.0 GB Report
EGAF00002144963 bam 1.4 GB Report
EGAF00002144964 bam 1.2 GB Report
EGAF00002144965 bam 1.2 GB Report
EGAF00002144966 bam 977.9 MB Report
EGAF00002144967 bam 1.2 GB Report
EGAF00002144968 bam 1.1 GB Report
44 Files (2.5 TB)