Normal prostatectomy project analysis and leftovers
Data collected as part of the Normal prostatectomy project analysis. Whole genome sequencing (WGS, targeted at 30X for normal tissue and 50X for tumour tissue) was performed on morphologically normal tissue samples from 30 patients with prostate cancer. In addition, seven prostate tissue samples were sequenced from 7 non-cancer patients: two collected after a cystoprostatectomy and five from samples collected at autopsy. Matched blood controls were included for all patients. An extra five samples were sequenced from the stroma of cell cultured fibroblasts. In addition a few tumour samples obtained at prostatectomy and their blood matched controls are included in this dataset from the main study that are not included elsewhere.
- 21/05/2018
- 71 samples
- DAC: EGAC00001000010
- Technology: Illumina HiSeq 2000
http://www.icgc.org/icgc/goals-structure-policies-guidelines/e1-informed-consent-access-and-ethical-oversight
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001000262 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
|
|---|---|---|---|---|
| EGAF00002010748 | bam | 86.4 GB | Report |
|
| EGAF00002010749 | bam | 106.2 GB | Report |
|
| EGAF00002010750 | bam | 85.0 GB | Report |
|
| EGAF00002010751 | bam | 132.2 GB | Report |
|
| EGAF00002010752 | bam | 79.3 GB | Report |
|
| EGAF00002010753 | bam | 131.2 GB | Report |
|
| EGAF00002010754 | bam | 81.0 GB | Report |
|
| EGAF00002010755 | bam | 74.7 GB | Report |
|
| EGAF00002010756 | bam | 79.7 GB | Report |
|
| EGAF00002010757 | bam | 74.9 GB | Report |
|
| EGAF00002010758 | bam | 80.9 GB | Report |
|
| EGAF00002010759 | bam | 68.0 GB | Report |
|
| EGAF00002010760 | bam | 87.6 GB | Report |
|
| EGAF00002010761 | bam | 87.9 GB | Report |
|
| EGAF00002010762 | bam | 90.5 GB | Report |
|
| EGAF00002010763 | bam | 76.4 GB | Report |
|
| EGAF00002010764 | bam | 81.2 GB | Report |
|
| EGAF00002010765 | bam | 72.3 GB | Report |
|
| EGAF00002010766 | bam | 73.9 GB | Report |
|
| EGAF00002010767 | bam | 99.7 GB | Report |
|
| EGAF00002010768 | bam | 85.8 GB | Report |
|
| EGAF00002010769 | bam | 79.7 GB | Report |
|
| EGAF00002010770 | bam | 86.0 GB | Report |
|
| EGAF00002010771 | bam | 101.1 GB | Report |
|
| EGAF00002010772 | bam | 79.1 GB | Report |
|
| EGAF00002010773 | bam | 75.1 GB | Report |
|
| EGAF00002010774 | bam | 86.8 GB | Report |
|
| EGAF00002010775 | bam | 85.9 GB | Report |
|
| EGAF00002010776 | bam | 71.4 GB | Report |
|
| EGAF00002010777 | bam | 90.1 GB | Report |
|
| EGAF00002010778 | bam | 78.9 GB | Report |
|
| EGAF00002010779 | bam | 71.6 GB | Report |
|
| EGAF00002010780 | bam | 76.3 GB | Report |
|
| EGAF00002010781 | bam | 70.7 GB | Report |
|
| EGAF00002010782 | bam | 82.6 GB | Report |
|
| EGAF00002010783 | bam | 69.8 GB | Report |
|
| EGAF00002010784 | bam | 142.2 GB | Report |
|
| EGAF00002010785 | bam | 80.4 GB | Report |
|
| EGAF00002010786 | bam | 77.8 GB | Report |
|
| EGAF00002010787 | bam | 84.1 GB | Report |
|
| EGAF00002010788 | bam | 74.6 GB | Report |
|
| EGAF00002010789 | bam | 72.8 GB | Report |
|
| EGAF00002010790 | bam | 64.7 GB | Report |
|
| EGAF00002010791 | bam | 104.6 GB | Report |
|
| EGAF00002010792 | bam | 73.0 GB | Report |
|
| EGAF00002010793 | bam | 44.1 GB | Report |
|
| EGAF00002010794 | bam | 63.7 GB | Report |
|
| EGAF00002010795 | bam | 41.6 GB | Report |
|
| EGAF00002010796 | bam | 62.7 GB | Report |
|
| EGAF00002010797 | bam | 115.7 GB | Report |
|
| EGAF00002010798 | bam | 83.7 GB | Report |
|
| EGAF00002010799 | bam | 47.1 GB | Report |
|
| EGAF00002010800 | bam | 79.6 GB | Report |
|
| EGAF00002010801 | bam | 45.7 GB | Report |
|
| EGAF00002010802 | bam | 78.5 GB | Report |
|
| EGAF00002010803 | bam | 46.8 GB | Report |
|
| EGAF00002010804 | bam | 90.4 GB | Report |
|
| EGAF00002010805 | bam | 42.4 GB | Report |
|
| EGAF00002010806 | bam | 80.4 GB | Report |
|
| EGAF00002010807 | bam | 44.9 GB | Report |
|
| EGAF00002010808 | bam | 78.3 GB | Report |
|
| EGAF00002010809 | bam | 63.5 GB | Report |
|
| EGAF00002010810 | bam | 60.1 GB | Report |
|
| EGAF00002010811 | bam | 72.4 GB | Report |
|
| EGAF00002010812 | bam | 61.2 GB | Report |
|
| EGAF00002010813 | bam | 83.2 GB | Report |
|
| EGAF00002010814 | bam | 40.9 GB | Report |
|
| EGAF00002010815 | bam | 81.6 GB | Report |
|
| EGAF00002010816 | bam | 42.4 GB | Report |
|
| EGAF00002010817 | bam | 80.8 GB | Report |
|
| EGAF00002010818 | bam | 40.0 GB | Report |
|
| 71 Files (5.5 TB) | ||||