About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Variant Calling used in ABB project

Variant Calling used in ABB project

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ABB Policy

For research only. There are two vcf files. One of them has the significant variants found in a RVAS analysis (CLL - Chronic lymphocytic leukemia). The other, has variants called by GATK HC and selected for a posterior Sanger Sequencing validation.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003027 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00002013046 vcf.gz 43.7 kB Report
EGAF00002013047 vcf.gz 4.0 MB Report
2 Files (4.1 MB)