Dataset

Deep WGS of matched tumor-normal pairs for HGSOC copy-number signatures study

Dataset ID Technology Samples
EGAD00001004189 HiSeq X Ten 111

Dataset Description

This dataset includes 111 bam files from WGS sequence data aligned to human genome assembly GRCh37 (hg19) from 56 tumour and matched normal samples. Libraries were constructed with ~350-bp insert length using the TruSeq Nano DNA Library prep kit (Illumina) and sequenced on an Illumina HiSeq X Ten System in paired-end 150-bp reads mode. The average depth was 60× (range 40-101×) in tumours and 40× (range 24-73×) in matched blood samples.

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

DAC of the BRITROC project
Contact person: Iain McNeish
Email: i [dot] mcneish [at] imperial [dot] ac [dot] uk
More details: EGAC00001000388

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