Dataset

Gene expression in CSF and whole blood of adults with proven bacterial meningitis in Malawi

Dataset ID Technology Samples
EGAD00001004488 NextSeq 500 45

Dataset Description

Dataset of BAM files from patients with proven bacterial meningitis in Malawi. Samples consist of BAM files from PolyA RNA seq runs from patients classifed as admission whole blood or CSF on admission (pre-antibiotics) in the Emergency Department. Subsequent BAM files are identical runs from whole blood from the same patients, taken at either day 10 or day 40 post admission to hospital. All patients have disease, they are divided into survivors and non-survivors at the day 40 time point.

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

BAM trial Data Access Committee
Contact person: Dr Emma Wall
Email: e [dot] wall [at] ucl [dot] ac [dot] uk
More details: EGAC00001001084

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