About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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RNAseq profiling of pediatric osteosarcoma

Primary pediatric osteosarcoma samples were collected and profiled using RNAseq. When possible, germline and tumor samples were collected. For some patients, multiple tumor tissues were collected and sequenced. Some of the samples were used to derive PDTX models, which were also profiled with RNAseq. Paired end sequencing was performed on Illumina HiSeq instruments and FASTQ files reported.

Request Access

Research focused data access

All data access requests should be submitted to Dr. Alejandro Sweet-Cordero at UCSF. All requests will be reviewed by the access committee.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003201 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00002301153 fastq.gz 1.9 GB Report
EGAF00002301154 fastq.gz 1.9 GB Report
EGAF00002301155 fastq.gz 1.8 GB Report
EGAF00002301156 fastq.gz 1.8 GB Report
EGAF00002301157 fastq.gz 2.2 GB Report
EGAF00002301158 fastq.gz 2.3 GB Report
EGAF00002301159 fastq.gz 3.0 GB Report
EGAF00002301160 fastq.gz 3.1 GB Report
EGAF00002301161 fastq.gz 4.3 GB Report
EGAF00002301162 fastq.gz 4.7 GB Report
EGAF00002301163 fastq.gz 1.6 GB Report
EGAF00002301164 fastq.gz 1.7 GB Report
EGAF00002301165 fastq.gz 1.4 GB Report
EGAF00002301166 fastq.gz 1.4 GB Report
EGAF00002301167 fastq.gz 1.9 GB Report
EGAF00002301168 fastq.gz 1.9 GB Report
EGAF00002301169 fastq.gz 774.5 MB Report
EGAF00002301170 fastq.gz 842.1 MB Report
EGAF00002301171 fastq.gz 2.6 GB Report
EGAF00002301172 fastq.gz 2.6 GB Report
EGAF00002301173 fastq.gz 5.8 GB Report
EGAF00002301174 fastq.gz 6.2 GB Report
EGAF00002301175 fastq.gz 2.0 GB Report
EGAF00002301176 fastq.gz 2.0 GB Report
EGAF00002301177 fastq.gz 9.8 GB Report
EGAF00002301178 fastq.gz 10.4 GB Report
EGAF00002301179 fastq.gz 3.3 GB Report
EGAF00002301180 fastq.gz 3.7 GB Report
EGAF00002301181 fastq.gz 2.3 GB Report
EGAF00002301182 fastq.gz 2.4 GB Report
EGAF00002301183 fastq.gz 2.2 GB Report
EGAF00002301184 fastq.gz 2.3 GB Report
EGAF00002301185 fastq.gz 4.2 GB Report
EGAF00002301186 fastq.gz 4.3 GB Report
EGAF00002301187 fastq.gz 1.9 GB Report
EGAF00002301188 fastq.gz 2.0 GB Report
EGAF00002301189 fastq.gz 2.6 GB Report
EGAF00002301190 fastq.gz 2.7 GB Report
EGAF00002301191 fastq.gz 4.1 GB Report
EGAF00002301192 fastq.gz 4.5 GB Report
EGAF00002301193 fastq.gz 5.6 GB Report
EGAF00002301194 fastq.gz 6.0 GB Report
EGAF00002301195 fastq.gz 6.1 GB Report
EGAF00002301196 fastq.gz 6.8 GB Report
EGAF00002301197 fastq.gz 2.9 GB Report
EGAF00002301198 fastq.gz 3.0 GB Report
EGAF00002301199 fastq.gz 2.1 GB Report
EGAF00002301200 fastq.gz 2.2 GB Report
EGAF00002301201 fastq.gz 4.2 GB Report
EGAF00002301202 fastq.gz 4.4 GB Report
EGAF00002301203 fastq.gz 2.9 GB Report
EGAF00002301204 fastq.gz 3.1 GB Report
EGAF00002301205 fastq.gz 5.3 GB Report
EGAF00002301206 fastq.gz 5.9 GB Report
EGAF00002301207 fastq.gz 5.9 GB Report
EGAF00002301208 fastq.gz 6.5 GB Report
EGAF00002301209 fastq.gz 6.5 GB Report
EGAF00002301210 fastq.gz 7.0 GB Report
EGAF00002301211 fastq.gz 6.7 GB Report
EGAF00002301212 fastq.gz 7.5 GB Report
60 Files (223.3 GB)