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Whole exome sequencing data of 57 matched esophageal tumor-normal pairs

The dataset includes whole exome sequencing (WES) data on 57 matched esophageal tumor-normal pair. The Agilent Sure-Select Human All Exon V4 plus UTRs reagent was used to capture the target exons and UTRs and Illumina HiSeq 2000 instrument was used to sequence the target region with approximately 72-fold coverage.

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ESCC GENOMIC DATA ACCESS AGREEMENT

This agreement governs the terms on which access will be granted to the ESCC genomic data generated by Prof. Jia’ s ESCC group in Sun Yat-sen University Cancer Center.In signing this agreement, You are agreeing to be bound by the terms and conditions ofaccess set out in this agreement.For the sake of clarity, the terms of access set out in this agreement apply both to the User and the User’s Institution (as defined below). User Institution and User are referred to within the agreement as “You” and “Your” shall be construed accordingly.Definitions:Data means all and any human genetic data obtained from the Jia’ s ESCC group.Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto.User means a researcher whose User Institution has previously completed this Data AccessAgreement and has received acknowledgement of its acceptance.Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research.User Institution means the organisation at which the User is employed, affiliated or enrolled.Terms and Conditions:In signing this Agreement:1. You agree to use the Data only for the advancement of medical research, according to theconsent obtained from sample donors.2. You agree not to use the data from the 1958 British Birth Cohort or any part thereof for the creation of products for sale or for any commercial purpose.3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy.4. You agree not to attempt to link the data provided under this agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevent access committees.5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable materialderived from the Data, to others, except as necessary for data/safety monitoring or programmemanagement. Should You wish to share the Data with a collaborator outwith the same Institution, the third party must make a separate application for access to the Data.6. You agree to use the data for the approved purpose and project described in your application; use of the data for a new purpose or project will require a new application and approval.7. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data.8. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the data, and the role of the Jia’ s ESCC group and the relevant primary collectors and their funders.9. You accept that the Jia’ s ESCC group, the original data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied:a) bear no legal responsibility for the accuracy or comprehensiveness of the Data; andb) accept no liability for indirect, consequential, or incidental, damages or losses arising fromuse of the Data, or from the unavailability of, or break in access to, the Data for whatever reason.10. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted.11. You recognise that nothing in this agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. The User Institution has the right to develop intellectual property based on comparisons with their own data.12. You accept that this agreement will terminate immediately upon any breach of this agreement by You and You will be required to destroy any Data held.13. You accept that it may be necessary for the Jia’ s ESCC group or its appointed agent to alter the terms of this agreement from time to time in order to address new concerns. In this event, the Jia’ s ESCC group or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement.14. You agree that you will submit a report to the Jia’ s ESCC group Data Access Committee, if requested, on completion of the agreed purpose. The Jia’ s ESCC group Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution. 15. You accept that the Data is protected by and subject to international laws, and that You are responsible for ensuring compliance with any such applicable law. The Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in the EAA.16. This agreement shall be construed, interpreted and governed by the laws of England and China and shall be subject to the non-exclusive jurisdiction of the English and China courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001001723 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00002300700 txt.gz 4.8 GB
EGAF00002300701 txt.gz 5.1 GB
EGAF00002300702 txt.gz 4.7 GB
EGAF00002300703 txt.gz 5.1 GB
EGAF00002300704 txt.gz 4.7 GB
EGAF00002300705 txt.gz 5.1 GB
EGAF00002300706 txt.gz 4.2 GB
EGAF00002300707 txt.gz 4.5 GB
EGAF00002300708 txt.gz 3.7 GB
EGAF00002300709 txt.gz 4.0 GB
EGAF00002300710 txt.gz 4.3 GB
EGAF00002300711 txt.gz 4.6 GB
EGAF00002300712 txt.gz 5.1 GB
EGAF00002300713 txt.gz 5.5 GB
EGAF00002300714 txt.gz 4.2 GB
EGAF00002300715 txt.gz 4.4 GB
EGAF00002300716 txt.gz 4.4 GB
EGAF00002300717 txt.gz 4.5 GB
EGAF00002300718 txt.gz 5.1 GB
EGAF00002300719 txt.gz 5.3 GB
EGAF00002300720 txt.gz 5.2 GB
EGAF00002300721 txt.gz 5.4 GB
EGAF00002300722 txt.gz 4.6 GB
EGAF00002300723 txt.gz 4.7 GB
EGAF00002300724 txt.gz 5.0 GB
EGAF00002300725 txt.gz 5.2 GB
EGAF00002300726 txt.gz 4.8 GB
EGAF00002300727 txt.gz 5.0 GB
EGAF00002300728 txt.gz 4.7 GB
EGAF00002300729 txt.gz 4.9 GB
EGAF00002300730 txt.gz 4.4 GB
EGAF00002300731 txt.gz 4.7 GB
EGAF00002300732 txt.gz 6.1 GB
EGAF00002300733 txt.gz 6.1 GB
EGAF00002300734 txt.gz 4.5 GB
EGAF00002300735 txt.gz 4.7 GB
EGAF00002300736 txt.gz 4.6 GB
EGAF00002300737 txt.gz 4.8 GB
EGAF00002300738 txt.gz 4.6 GB
EGAF00002300739 txt.gz 4.8 GB
EGAF00002300740 txt.gz 4.5 GB
EGAF00002300741 txt.gz 4.7 GB
EGAF00002300742 txt.gz 4.5 GB
EGAF00002300743 txt.gz 4.7 GB
EGAF00002300744 txt.gz 5.4 GB
EGAF00002300745 txt.gz 5.6 GB
EGAF00002300746 txt.gz 4.7 GB
EGAF00002300747 txt.gz 4.9 GB
EGAF00002300748 txt.gz 4.3 GB
EGAF00002300749 txt.gz 4.5 GB
EGAF00002300750 txt.gz 4.8 GB
EGAF00002300751 txt.gz 5.0 GB
EGAF00002300752 txt.gz 7.8 GB
EGAF00002300753 txt.gz 7.8 GB
EGAF00002300754 txt.gz 4.7 GB
EGAF00002300755 txt.gz 4.9 GB
EGAF00002300756 txt.gz 5.0 GB
EGAF00002300757 txt.gz 5.2 GB
EGAF00002300758 txt.gz 5.2 GB
EGAF00002300759 txt.gz 5.3 GB
EGAF00002300760 txt.gz 5.0 GB
EGAF00002300761 txt.gz 5.1 GB
EGAF00002300762 txt.gz 4.9 GB
EGAF00002300763 txt.gz 5.1 GB
EGAF00002300764 txt.gz 5.7 GB
EGAF00002300765 txt.gz 5.9 GB
EGAF00002300766 txt.gz 4.4 GB
EGAF00002300767 txt.gz 4.6 GB
EGAF00002300768 txt.gz 4.3 GB
EGAF00002300769 txt.gz 4.4 GB
EGAF00002300770 txt.gz 4.6 GB
EGAF00002300771 txt.gz 4.6 GB
EGAF00002300772 txt.gz 4.1 GB
EGAF00002300773 txt.gz 4.2 GB
EGAF00002300774 txt.gz 4.6 GB
EGAF00002300775 txt.gz 4.7 GB
EGAF00002300776 txt.gz 5.0 GB
EGAF00002300777 txt.gz 5.0 GB
EGAF00002300778 txt.gz 4.6 GB
EGAF00002300779 txt.gz 4.6 GB
EGAF00002300780 txt.gz 4.7 GB
EGAF00002300781 txt.gz 4.8 GB
EGAF00002300782 txt.gz 4.9 GB
EGAF00002300783 txt.gz 5.0 GB
EGAF00002300784 txt.gz 4.4 GB
EGAF00002300785 txt.gz 4.4 GB
EGAF00002300786 txt.gz 5.0 GB
EGAF00002300787 txt.gz 5.0 GB
EGAF00002300788 txt.gz 4.5 GB
EGAF00002300789 txt.gz 4.5 GB
EGAF00002300790 txt.gz 4.4 GB
EGAF00002300791 txt.gz 4.4 GB
EGAF00002300792 txt.gz 4.4 GB
EGAF00002300793 txt.gz 4.4 GB
EGAF00002300794 txt.gz 4.6 GB
EGAF00002300795 txt.gz 4.6 GB
EGAF00002300796 txt.gz 4.6 GB
EGAF00002300797 txt.gz 4.6 GB
EGAF00002300798 txt.gz 4.9 GB
EGAF00002300799 txt.gz 4.9 GB
EGAF00002300800 txt.gz 4.7 GB
EGAF00002300801 txt.gz 4.7 GB
EGAF00002300802 txt.gz 5.4 GB
EGAF00002300803 txt.gz 5.4 GB
EGAF00002300804 txt.gz 8.3 GB
EGAF00002300805 txt.gz 8.4 GB
EGAF00002300806 txt.gz 7.8 GB
EGAF00002300807 txt.gz 7.9 GB
EGAF00002300808 txt.gz 7.6 GB
EGAF00002300809 txt.gz 7.7 GB
EGAF00002300810 txt.gz 7.6 GB
EGAF00002300811 txt.gz 7.7 GB
EGAF00002300812 txt.gz 5.7 GB
EGAF00002300813 txt.gz 5.7 GB
EGAF00002300814 txt.gz 4.3 GB
EGAF00002300815 txt.gz 4.3 GB
EGAF00002300816 txt.gz 4.2 GB
EGAF00002300817 txt.gz 4.2 GB
EGAF00002300818 txt.gz 5.0 GB
EGAF00002300819 txt.gz 5.1 GB
EGAF00002300820 txt.gz 4.5 GB
EGAF00002300821 txt.gz 4.6 GB
EGAF00002300822 txt.gz 5.0 GB
EGAF00002300823 txt.gz 5.0 GB
EGAF00002300824 txt.gz 4.0 GB
EGAF00002300825 txt.gz 4.0 GB
EGAF00002300826 txt.gz 4.7 GB
EGAF00002300827 txt.gz 4.7 GB
EGAF00002300828 txt.gz 5.4 GB
EGAF00002300829 txt.gz 5.4 GB
EGAF00002300830 txt.gz 5.0 GB
EGAF00002300831 txt.gz 5.1 GB
EGAF00002300832 txt.gz 5.2 GB
EGAF00002300833 txt.gz 5.3 GB
EGAF00002300834 txt.gz 5.2 GB
EGAF00002300835 txt.gz 5.2 GB
EGAF00002300836 txt.gz 7.9 GB
EGAF00002300837 txt.gz 8.0 GB
EGAF00002300838 txt.gz 7.4 GB
EGAF00002300839 txt.gz 7.5 GB
EGAF00002300840 txt.gz 7.3 GB
EGAF00002300841 txt.gz 7.4 GB
EGAF00002300842 txt.gz 7.7 GB
EGAF00002300843 txt.gz 7.8 GB
EGAF00002300844 txt.gz 4.5 GB
EGAF00002300845 txt.gz 4.5 GB
EGAF00002300846 txt.gz 4.7 GB
EGAF00002300847 txt.gz 4.8 GB
EGAF00002300848 txt.gz 4.5 GB
EGAF00002300849 txt.gz 4.5 GB
EGAF00002300850 txt.gz 7.5 GB
EGAF00002300851 txt.gz 7.5 GB
EGAF00002300852 txt.gz 5.0 GB
EGAF00002300853 txt.gz 5.0 GB
EGAF00002300854 txt.gz 4.4 GB
EGAF00002300855 txt.gz 4.4 GB
EGAF00002300856 txt.gz 4.6 GB
EGAF00002300857 txt.gz 4.6 GB
EGAF00002300858 txt.gz 4.3 GB
EGAF00002300859 txt.gz 4.3 GB
EGAF00002300860 txt.gz 4.3 GB
EGAF00002300861 txt.gz 4.3 GB
EGAF00002300862 txt.gz 5.3 GB
EGAF00002300863 txt.gz 5.7 GB
EGAF00002300864 txt.gz 7.8 GB
EGAF00002300865 txt.gz 7.9 GB
EGAF00002300866 txt.gz 4.3 GB
EGAF00002300867 txt.gz 4.6 GB
EGAF00002300868 txt.gz 4.1 GB
EGAF00002300869 txt.gz 4.4 GB
EGAF00002300870 txt.gz 3.8 GB
EGAF00002300871 txt.gz 4.1 GB
EGAF00002300872 txt.gz 4.9 GB
EGAF00002300873 txt.gz 5.0 GB
EGAF00002300874 txt.gz 4.0 GB
EGAF00002300875 txt.gz 4.1 GB
EGAF00002300876 txt.gz 5.1 GB
EGAF00002300877 txt.gz 5.2 GB
EGAF00002300878 txt.gz 4.1 GB
EGAF00002300879 txt.gz 4.2 GB
EGAF00002300880 txt.gz 3.9 GB
EGAF00002300881 txt.gz 4.2 GB
EGAF00002300882 txt.gz 4.2 GB
EGAF00002300883 txt.gz 4.5 GB
EGAF00002300884 txt.gz 4.1 GB
EGAF00002300885 txt.gz 4.4 GB
EGAF00002300886 txt.gz 4.6 GB
EGAF00002300887 txt.gz 4.9 GB
EGAF00002300888 txt.gz 4.5 GB
EGAF00002300889 txt.gz 4.8 GB
EGAF00002300890 txt.gz 3.8 GB
EGAF00002300891 txt.gz 4.0 GB
EGAF00002300892 txt.gz 4.6 GB
EGAF00002300893 txt.gz 4.6 GB
EGAF00002300894 txt.gz 4.7 GB
EGAF00002300895 txt.gz 4.8 GB
EGAF00002300896 txt.gz 4.7 GB
EGAF00002300897 txt.gz 5.0 GB
EGAF00002300898 txt.gz 4.4 GB
EGAF00002300899 txt.gz 4.7 GB
EGAF00002300900 txt.gz 4.8 GB
EGAF00002300901 txt.gz 4.8 GB
EGAF00002300902 txt.gz 5.0 GB
EGAF00002300903 txt.gz 5.0 GB
EGAF00002300904 txt.gz 7.8 GB
EGAF00002300905 txt.gz 7.8 GB
EGAF00002300906 txt.gz 8.0 GB
EGAF00002300907 txt.gz 8.1 GB
EGAF00002300908 txt.gz 9.4 GB
EGAF00002300909 txt.gz 9.5 GB
EGAF00002300910 txt.gz 8.5 GB
EGAF00002300911 txt.gz 8.5 GB
EGAF00002300912 txt.gz 4.9 GB
EGAF00002300913 txt.gz 4.9 GB
EGAF00002300914 txt.gz 5.1 GB
EGAF00002300915 txt.gz 5.0 GB
EGAF00002300916 txt.gz 4.6 GB
EGAF00002300917 txt.gz 4.9 GB
EGAF00002300918 txt.gz 4.6 GB
EGAF00002300919 txt.gz 4.9 GB
EGAF00002300920 txt.gz 4.3 GB
EGAF00002300921 txt.gz 4.5 GB
EGAF00002300922 txt.gz 4.6 GB
EGAF00002300923 txt.gz 4.9 GB
EGAF00002300924 txt.gz 4.6 GB
EGAF00002300925 txt.gz 4.9 GB
EGAF00002300926 txt.gz 4.8 GB
EGAF00002300927 txt.gz 4.9 GB
228 Files (1.2 TB)