About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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clonealign: 10X genomics chromium single-cell RNA-sequencing

10X genomics chromium single-cell RNA-sequencing of (i) patient derived triple negative breast cancer xenograft (ii) primary tumour and ascites ovarian cancer cell lines at tumour recurrence.

Request Access

DUO:0000004
version: 2019-01-07

no restriction

This data use permission indicates there is no restriction on use.

DUO:0000012
version: 2021-02-23

research specific restrictions

This data use modifier indicates that use is limited to studies of a certain research type.

DUO:0000025
version: 2021-02-23

time limit on use

This data use modifier indicates that use is approved for a specific number of months.

BC Cancer, part of the Provincial Health Services Authority - Data Access Policy

Access to this data is controlled. There are a number of steps that a researcher must take to obtain access to this data, including execution of a Data Access Agreement between the institutions. The process is overseen by the Technology Development Office; please contact our general email address TDOadmin@phsa.ca. Please only click the "request data" button on the EGA website after a Data Access Agreement is fully executed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003387 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00002311844 fastq.gz 453.6 MB Report
EGAF00002311845 fastq.gz 1.4 GB Report
EGAF00002311846 fastq.gz 2.7 GB Report
EGAF00002311847 fastq.gz 445.9 MB Report
EGAF00002311848 fastq.gz 1.4 GB Report
EGAF00002311849 fastq.gz 2.6 GB Report
EGAF00002311850 fastq.gz 448.0 MB Report
EGAF00002311851 fastq.gz 1.4 GB Report
EGAF00002311852 fastq.gz 2.6 GB Report
EGAF00002311853 fastq.gz 448.9 MB Report
EGAF00002311854 fastq.gz 1.4 GB Report
EGAF00002311855 fastq.gz 2.6 GB Report
EGAF00002311856 fastq.gz 358.0 MB Report
EGAF00002311857 fastq.gz 1.1 GB Report
EGAF00002311858 fastq.gz 2.0 GB Report
EGAF00002311859 fastq.gz 350.8 MB Report
EGAF00002311860 fastq.gz 1.0 GB Report
EGAF00002311861 fastq.gz 2.0 GB Report
EGAF00002311862 fastq.gz 352.3 MB Report
EGAF00002311863 fastq.gz 1.0 GB Report
EGAF00002311864 fastq.gz 2.0 GB Report
EGAF00002311865 fastq.gz 351.8 MB Report
EGAF00002311866 fastq.gz 1.0 GB Report
EGAF00002311867 fastq.gz 2.0 GB Report
EGAF00002311868 fastq.gz 332.2 MB Report
EGAF00002311869 fastq.gz 885.1 MB Report
EGAF00002311870 fastq.gz 2.0 GB Report
EGAF00002311871 fastq.gz 320.6 MB Report
EGAF00002311872 fastq.gz 852.3 MB Report
EGAF00002311873 fastq.gz 1.9 GB Report
EGAF00002311874 fastq.gz 326.1 MB Report
EGAF00002311875 fastq.gz 860.9 MB Report
EGAF00002311876 fastq.gz 1.9 GB Report
EGAF00002311877 fastq.gz 330.9 MB Report
EGAF00002311878 fastq.gz 899.0 MB Report
EGAF00002311879 fastq.gz 2.0 GB Report
36 Files (44.1 GB)