About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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RNA-Seq data from 34 CAF-S3 subset in human breast and ovarian cancers

This dataset is related to publications Costa et al. Cancer Cell 2018 and Givel et al. Nat. Commun. 2018 which describe the identification of 4 Cancer Associated Fibroblasts (CAF) in breast and ovarian cancer. This dataset contains transcriptomic profiles obtained by RNA-Seq of 34 CAF-S3 samples from breast and ovarian Tumors.

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Data Access policy

Access to the sequence level data produced by the «U830 Stress and Cancer» laboratory at the Institut Curie is controlled by Fatima Mechta-Grigoriou, Principal Investigator (DAC). Access to data will be granted to qualified investigators for appropriate use after request to Fatima.Mechta-Grigoriou@curie.fr

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003344 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00002402982 fastq.gz 969.4 MB Report
EGAF00002402983 fastq.gz 922.2 MB Report
EGAF00002402984 fastq.gz 2.1 GB Report
EGAF00002402985 fastq.gz 2.1 GB Report
EGAF00002402986 fastq.gz 1.8 GB Report
EGAF00002402987 fastq.gz 1.8 GB Report
EGAF00002402988 fastq.gz 1.9 GB Report
EGAF00002402989 fastq.gz 1.9 GB Report
EGAF00002402990 fastq.gz 2.0 GB Report
EGAF00002402991 fastq.gz 2.1 GB Report
EGAF00002402992 fastq.gz 2.2 GB Report
EGAF00002402993 fastq.gz 2.2 GB Report
EGAF00002402994 fastq.gz 2.0 GB Report
EGAF00002402995 fastq.gz 2.0 GB Report
EGAF00002402996 fastq.gz 2.4 GB Report
EGAF00002402997 fastq.gz 2.5 GB Report
EGAF00002402998 fastq.gz 2.5 GB Report
EGAF00002402999 fastq.gz 2.6 GB Report
EGAF00002403000 fastq.gz 2.6 GB Report
EGAF00002403001 fastq.gz 2.6 GB Report
EGAF00002403002 fastq.gz 2.5 GB Report
EGAF00002403003 fastq.gz 2.5 GB Report
EGAF00002403004 fastq.gz 2.4 GB Report
EGAF00002403005 fastq.gz 2.5 GB Report
EGAF00002403006 fastq.gz 2.7 GB Report
EGAF00002403007 fastq.gz 2.8 GB Report
EGAF00002403008 fastq.gz 2.4 GB Report
EGAF00002403009 fastq.gz 2.4 GB Report
EGAF00002403010 fastq.gz 1.8 GB Report
EGAF00002403011 fastq.gz 1.9 GB Report
EGAF00002403012 fastq.gz 2.2 GB Report
EGAF00002403013 fastq.gz 2.2 GB Report
EGAF00002403014 fastq.gz 2.3 GB Report
EGAF00002403015 fastq.gz 2.3 GB Report
EGAF00002403016 fastq.gz 2.4 GB Report
EGAF00002403017 fastq.gz 2.5 GB Report
EGAF00002403018 fastq.gz 2.4 GB Report
EGAF00002403019 fastq.gz 2.5 GB Report
EGAF00002403020 fastq.gz 2.7 GB Report
EGAF00002403021 fastq.gz 2.8 GB Report
EGAF00002403022 fastq.gz 2.1 GB Report
EGAF00002403023 fastq.gz 2.1 GB Report
EGAF00002403024 fastq.gz 2.5 GB Report
EGAF00002403025 fastq.gz 2.6 GB Report
EGAF00002403026 fastq.gz 3.0 GB Report
EGAF00002403027 fastq.gz 3.0 GB Report
EGAF00002403028 fastq.gz 2.9 GB Report
EGAF00002403029 fastq.gz 3.0 GB Report
EGAF00002403030 fastq.gz 3.0 GB Report
EGAF00002403031 fastq.gz 3.1 GB Report
EGAF00002403032 fastq.gz 2.6 GB Report
EGAF00002403033 fastq.gz 2.7 GB Report
EGAF00002403034 fastq.gz 2.9 GB Report
EGAF00002403035 fastq.gz 3.0 GB Report
EGAF00002403036 fastq.gz 1.9 GB Report
EGAF00002403037 fastq.gz 1.9 GB Report
EGAF00002403038 fastq.gz 1.4 GB Report
EGAF00002403039 fastq.gz 1.5 GB Report
EGAF00002403040 fastq.gz 1.9 GB Report
EGAF00002403041 fastq.gz 2.0 GB Report
EGAF00002403042 fastq.gz 1.4 GB Report
EGAF00002403043 fastq.gz 1.5 GB Report
EGAF00002403044 fastq.gz 1.8 GB Report
EGAF00002403045 fastq.gz 1.9 GB Report
EGAF00002403046 fastq.gz 1.8 GB Report
EGAF00002403047 fastq.gz 2.0 GB Report
EGAF00002403048 fastq.gz 2.0 GB Report
EGAF00002403049 fastq.gz 2.2 GB Report
68 Files (153.2 GB)