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Dataset

Comparison of 3 protocols for deriving pancreatic progenitors from hPSCs (RNA-seq)

Dataset ID Technology Samples
EGAD00001004823 Illumina HiSeq 4000 26

Dataset Description

This dataset contains 26 mapped bam files. The samples were generated with 3 different protocols for deriving pancreatic progenitors from hPSC. Three parallel differentiations were performed, all done in a hPSC NKX6.1-GFP reporter line. For each protocol there are three cellular populations: total (presort), GFP+ and GFP- . In summary: 3 differentiations x 3 protocols x 3 cellular populations. We prepared Smart-Seq2 RNA-seq libraries for the 27 samples, 1 sample failed library preparation and is not therefore included in this dataset.

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

Agata's dummy DAC
Contact person: Agata Wesolowska-Andersen
Email: agata [at] well [dot] ox [dot] ac [dot] uk
More details: EGAC00001000818

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