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Chromatin 3D interactions mediate genetic effects on gene expression (RNA-seq)

RNA-seq data for 168 Lymphoblastoid Cell Lines (LCL) and 78 Fibroblasts (FIB) from the Gencord Cohort. This dataset was generated as part of the following study: Delaneau et al (2019). Chromatin 3D interactions mediate genetic effects on gene expression.

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Policy Statement GENCORD2

To whom it may concern,This document refers to the data set, EGAS00001000446, which has been submitted to the European Genome Archive (EGA) for the controlled access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by the Gencord Data Access Committee, composed by: Stylianos Antonarakis, University of Geneva (co-chair) Emmanouil Dermitzakis, University of Geneva (co-chair) Serge Ferrari, University of Geneva Alexandre Reymond, University of Lausanne All requests for data access should be sent to both: Stylianos Antonarakis (stylianos. antonarakis@unige.ch) and Emmanouil Dermitzakis (emmanouil.dermitzakis@unige.ch). There are a number of steps that a researcher must take to obtain access to this data and the process is overseen by the Gencord Data Access Committee.The submission of our dataset is in accordance with the local ethics committee approval and the laws and regulations of canton of Geneva and Switzerland, and in accordance with the informed consent and the local ethics approval of the University Hospitals of the University of Geneva. Please be advised that Olivier Delaneau (olivier.delaneau@unil.ch) is authorized to upload data to the EGA for archiving and distribution as part of your submission process, which will enable approved researchers to have encrypted access to the data. We can confirm that this submission is consistent with the informed consent of the participants of the study or has been granted ethical approval and is in accordance with the applicable laws and regulations. Sincerely, Emmanouil Dermitzakis Stylianos Antonarakis

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003485 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00002405009 bam 1.8 GB Report
EGAF00002405010 bam 2.1 GB Report
EGAF00002405011 bam 2.1 GB Report
EGAF00002405012 bam 1.9 GB Report
EGAF00002405013 bam 2.9 GB Report
EGAF00002405014 bam 1.6 GB Report
EGAF00002405015 bam 1.7 GB Report
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EGAF00002405059 bam 2.2 GB Report
EGAF00002405060 bam 1.4 GB Report
EGAF00002405061 bam 1.3 GB Report
EGAF00002405062 bam 1.5 GB Report
EGAF00002405063 bam 1.6 GB Report
EGAF00002405064 bam 1.4 GB Report
EGAF00002405065 bam 1.6 GB Report
EGAF00002405066 bam 1.6 GB Report
EGAF00002405067 bam 1.9 GB Report
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EGAF00002405069 bam 1.7 GB Report
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EGAF00002405077 bam 1.9 GB Report
EGAF00002405078 bam 1.6 GB Report
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EGAF00002405080 bam 1.4 GB Report
EGAF00002405081 bam 962.8 MB Report
EGAF00002405082 bam 1.3 GB Report
EGAF00002405083 bam 1.4 GB Report
EGAF00002405084 bam 1.6 GB Report
EGAF00002405085 bam 1.7 GB Report
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EGAF00002405087 bam 1.4 GB Report
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EGAF00002405089 bam 1.7 GB Report
EGAF00002405090 bam 1.5 GB Report
EGAF00002405091 bam 1.7 GB Report
EGAF00002405092 bam 2.0 GB Report
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EGAF00002405100 bam 1.7 GB Report
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EGAF00002405116 bam 1.4 GB Report
EGAF00002405117 bam 1.9 GB Report
EGAF00002405118 bam 2.2 GB Report
EGAF00002405119 bam 2.1 GB Report
EGAF00002405120 bam 1.7 GB Report
EGAF00002405121 bam 1.4 GB Report
EGAF00002405122 bam 2.2 GB Report
EGAF00002405123 bam 1.5 GB Report
EGAF00002405124 bam 2.0 GB Report
EGAF00002405125 bam 1.3 GB Report
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EGAF00002405128 bam 1.2 GB Report
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EGAF00002405130 bam 1.2 GB Report
EGAF00002405131 bam 1.6 GB Report
EGAF00002405132 bam 1.6 GB Report
EGAF00002405133 bam 1.7 GB Report
EGAF00002405134 bam 1.9 GB Report
EGAF00002405135 bam 1.3 GB Report
EGAF00002405136 bam 1.6 GB Report
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EGAF00002405143 bam 5.9 GB Report
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EGAF00002405164 bam 1.6 GB Report
EGAF00002405165 bam 1.4 GB Report
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EGAF00002405167 bam 1.4 GB Report
EGAF00002405168 bam 1.5 GB Report
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EGAF00002405174 bam 1.9 GB Report
EGAF00002405175 bam 2.1 GB Report
EGAF00002405176 bam 2.1 GB Report
EGAF00002405177 bam 2.0 GB Report
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EGAF00002405180 bam 2.4 GB Report
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EGAF00002405183 bam 1.9 GB Report
EGAF00002405184 bam 2.1 GB Report
EGAF00002405185 bam 2.0 GB Report
EGAF00002405186 bam 2.4 GB Report
EGAF00002405187 bam 1.3 GB Report
EGAF00002405188 bam 1.9 GB Report
EGAF00002405189 bam 2.3 GB Report
EGAF00002405190 bam 2.1 GB Report
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EGAF00002405192 bam 2.4 GB Report
EGAF00002405193 bam 1.4 GB Report
EGAF00002405194 bam 1.5 GB Report
EGAF00002405195 bam 2.1 GB Report
EGAF00002405196 bam 1.2 GB Report
EGAF00002405197 bam 1.4 GB Report
EGAF00002405198 bam 1.1 GB Report
EGAF00002405199 bam 1.2 GB Report
EGAF00002405200 bam 2.0 GB Report
EGAF00002405201 bam 1.8 GB Report
EGAF00002405202 bam 899.2 MB Report
EGAF00002405203 bam 1.7 GB Report
EGAF00002405204 bam 1.7 GB Report
EGAF00002405205 bam 1.4 GB Report
EGAF00002405206 bam 1.6 GB Report
EGAF00002405207 bam 1.4 GB Report
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EGAF00002405210 bam 1.4 GB Report
EGAF00002405211 bam 911.7 MB Report
EGAF00002405212 bam 1.1 GB Report
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EGAF00002405220 bam 1.2 GB Report
EGAF00002405221 bam 1.8 GB Report
EGAF00002405222 bam 1.4 GB Report
EGAF00002405223 bam 850.0 MB Report
EGAF00002405224 bam 1.8 GB Report
EGAF00002405225 bam 1.5 GB Report
EGAF00002405226 bam 1.8 GB Report
EGAF00002405227 bam 1.7 GB Report
EGAF00002405228 bam 1.5 GB Report
EGAF00002405229 bam 1.1 GB Report
EGAF00002405230 bam 1.6 GB Report
EGAF00002405231 bam 1.5 GB Report
EGAF00002405232 bam 1.6 GB Report
EGAF00002405233 bam 1.2 GB Report
EGAF00002405234 bam 1.5 GB Report
EGAF00002405235 bam 1.5 GB Report
EGAF00002405236 bam 1.7 GB Report
EGAF00002405237 bam 1.6 GB Report
EGAF00002405238 bam 1.8 GB Report
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EGAF00002405240 bam 1.5 GB Report
EGAF00002405241 bam 1.7 GB Report
EGAF00002405242 bam 1.5 GB Report
EGAF00002405243 bam 1.5 GB Report
EGAF00002405244 bam 839.9 MB Report
EGAF00002405245 bam 1.4 GB Report
EGAF00002405246 bam 1.8 GB Report
EGAF00002405247 bam 1.5 GB Report
EGAF00002405248 bam 1.4 GB Report
EGAF00002405249 bam 1.6 GB Report
EGAF00002405250 bam 1.5 GB Report
EGAF00002405251 bam 1.6 GB Report
EGAF00002405252 bam 1.7 GB Report
EGAF00002405253 bam 801.2 MB Report
EGAF00002405254 bam 1.8 GB Report
246 Files (398.3 GB)