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Human pan-genome analysis

The reference human genome is still incomplete, and several non-reference sequences have derived from diverse populations. With the available of whole genome sequencing data from multiple individuals, we could construct the pan-genome sequence. Here we provide high quality genome sequencing (~30x coverage) from 185 Han Chinese individuals. All samples were sequenced using Illumina HiSeq X10 sequencer and paired-end 150-bp reads were produced.

Request Access

HUPAN data policy

Data for this study can be obtained by submitting to the EGA Data Access Committee a signed letter containing the following text: “(a) I will not distribute the data outside my collaboration; (b) I will not post the data publicly; (c) I will make no attempt to connect the genetic data to personal identifiers for the samples; and (d) I will not use the data for any commercial purposes.”

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003657 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00002463855 fastq.gz 29.9 GB
EGAF00002463856 fastq.gz 34.7 GB
EGAF00002463857 fastq.gz 28.3 GB
EGAF00002463858 fastq.gz 32.9 GB
EGAF00002464802 fastq.gz 28.2 GB
EGAF00002464803 fastq.gz 32.7 GB
EGAF00002464804 fastq.gz 33.0 GB
EGAF00002464805 fastq.gz 38.0 GB
EGAF00002464806 fastq.gz 28.3 GB
EGAF00002464807 fastq.gz 33.1 GB
EGAF00002464808 fastq.gz 28.7 GB
EGAF00002464809 fastq.gz 32.7 GB
EGAF00002464810 fastq.gz 33.3 GB
EGAF00002464811 fastq.gz 37.9 GB
EGAF00002464812 fastq.gz 26.7 GB
EGAF00002464813 fastq.gz 31.0 GB
EGAF00002464814 fastq.gz 28.6 GB
EGAF00002464815 fastq.gz 32.9 GB
EGAF00002464816 fastq.gz 29.9 GB
EGAF00002464817 fastq.gz 33.8 GB
EGAF00002464818 fastq.gz 28.0 GB
EGAF00002464819 fastq.gz 32.4 GB
EGAF00002464820 fastq.gz 28.8 GB
EGAF00002464821 fastq.gz 33.7 GB
EGAF00002464822 fastq.gz 26.2 GB
EGAF00002464823 fastq.gz 30.7 GB
EGAF00002464824 fastq.gz 33.6 GB
EGAF00002464825 fastq.gz 38.3 GB
EGAF00002464826 fastq.gz 31.3 GB
EGAF00002464827 fastq.gz 36.3 GB
EGAF00002464828 fastq.gz 28.8 GB
EGAF00002464829 fastq.gz 33.2 GB
EGAF00002464830 fastq.gz 26.4 GB
EGAF00002464831 fastq.gz 30.7 GB
EGAF00002464832 fastq.gz 31.5 GB
EGAF00002464833 fastq.gz 36.2 GB
EGAF00002464844 fastq.gz 30.9 GB
EGAF00002464845 fastq.gz 36.2 GB
EGAF00002464846 fastq.gz 26.8 GB
EGAF00002464847 fastq.gz 30.6 GB
EGAF00002464848 fastq.gz 26.4 GB
EGAF00002464849 fastq.gz 33.0 GB
EGAF00002464850 fastq.gz 28.2 GB
EGAF00002464851 fastq.gz 31.3 GB
EGAF00002464852 fastq.gz 26.3 GB
EGAF00002464853 fastq.gz 29.9 GB
EGAF00002464854 fastq.gz 26.4 GB
EGAF00002464855 fastq.gz 29.9 GB
EGAF00002464856 fastq.gz 30.5 GB
EGAF00002464857 fastq.gz 33.6 GB
EGAF00002464858 fastq.gz 35.1 GB
EGAF00002464859 fastq.gz 41.1 GB
EGAF00002464860 fastq.gz 27.4 GB
EGAF00002464861 fastq.gz 31.8 GB
EGAF00002464862 fastq.gz 29.2 GB
EGAF00002464863 fastq.gz 33.6 GB
EGAF00002464864 fastq.gz 31.8 GB
EGAF00002464865 fastq.gz 36.3 GB
EGAF00002464866 fastq.gz 25.8 GB
EGAF00002464867 fastq.gz 29.7 GB
EGAF00002464868 fastq.gz 32.0 GB
EGAF00002464869 fastq.gz 36.7 GB
EGAF00002464870 fastq.gz 28.3 GB
EGAF00002464871 fastq.gz 32.3 GB
EGAF00002464872 fastq.gz 27.0 GB
EGAF00002464873 fastq.gz 30.4 GB
EGAF00002464874 fastq.gz 29.2 GB
EGAF00002464875 fastq.gz 33.0 GB
EGAF00002464876 fastq.gz 28.7 GB
EGAF00002464877 fastq.gz 33.0 GB
EGAF00002464878 fastq.gz 31.0 GB
EGAF00002464879 fastq.gz 35.6 GB
EGAF00002464880 fastq.gz 31.5 GB
EGAF00002464881 fastq.gz 37.1 GB
EGAF00002464882 fastq.gz 36.5 GB
EGAF00002464883 fastq.gz 39.8 GB
EGAF00002464884 fastq.gz 32.6 GB
EGAF00002464885 fastq.gz 37.2 GB
EGAF00002464886 fastq.gz 30.2 GB
EGAF00002464887 fastq.gz 34.3 GB
EGAF00002464888 fastq.gz 31.2 GB
EGAF00002464889 fastq.gz 35.1 GB
EGAF00002464892 fastq.gz 25.1 GB
EGAF00002464893 fastq.gz 28.3 GB
EGAF00002464894 fastq.gz 29.7 GB
EGAF00002464895 fastq.gz 34.9 GB
EGAF00002464896 fastq.gz 26.8 GB
EGAF00002464897 fastq.gz 31.0 GB
EGAF00002464898 fastq.gz 30.0 GB
EGAF00002464899 fastq.gz 35.2 GB
EGAF00002464900 fastq.gz 29.7 GB
EGAF00002464901 fastq.gz 34.1 GB
EGAF00002464902 fastq.gz 28.1 GB
EGAF00002464903 fastq.gz 31.6 GB
EGAF00002464904 fastq.gz 31.0 GB
EGAF00002464905 fastq.gz 35.7 GB
EGAF00002464906 fastq.gz 24.8 GB
EGAF00002464907 fastq.gz 27.7 GB
EGAF00002464908 fastq.gz 34.5 GB
EGAF00002464909 fastq.gz 39.5 GB
EGAF00002464910 fastq.gz 30.2 GB
EGAF00002464911 fastq.gz 34.8 GB
EGAF00002464912 fastq.gz 32.0 GB
EGAF00002464913 fastq.gz 35.2 GB
EGAF00002464914 fastq.gz 33.9 GB
EGAF00002464915 fastq.gz 39.2 GB
EGAF00002464916 fastq.gz 29.2 GB
EGAF00002464917 fastq.gz 33.4 GB
EGAF00002464918 fastq.gz 29.2 GB
EGAF00002464919 fastq.gz 33.4 GB
EGAF00002464920 fastq.gz 30.1 GB
EGAF00002464921 fastq.gz 33.7 GB
EGAF00002464922 fastq.gz 32.3 GB
EGAF00002464923 fastq.gz 36.3 GB
EGAF00002464924 fastq.gz 29.4 GB
EGAF00002464925 fastq.gz 33.1 GB
EGAF00002464926 fastq.gz 31.4 GB
EGAF00002464927 fastq.gz 35.4 GB
EGAF00002464928 fastq.gz 27.1 GB
EGAF00002464929 fastq.gz 30.8 GB
EGAF00002464930 fastq.gz 30.0 GB
EGAF00002464931 fastq.gz 33.8 GB
EGAF00002464932 fastq.gz 23.7 GB
EGAF00002464933 fastq.gz 27.7 GB
EGAF00002464934 fastq.gz 29.6 GB
EGAF00002464935 fastq.gz 34.0 GB
EGAF00002464936 fastq.gz 31.1 GB
EGAF00002464937 fastq.gz 36.5 GB
EGAF00002464938 fastq.gz 32.4 GB
EGAF00002464939 fastq.gz 38.6 GB
EGAF00002464940 fastq.gz 27.8 GB
EGAF00002464941 fastq.gz 31.9 GB
EGAF00002464942 fastq.gz 28.7 GB
EGAF00002464943 fastq.gz 33.0 GB
EGAF00002464944 fastq.gz 27.6 GB
EGAF00002464945 fastq.gz 31.3 GB
EGAF00002464946 fastq.gz 27.8 GB
EGAF00002464947 fastq.gz 32.1 GB
EGAF00002464948 fastq.gz 29.6 GB
EGAF00002464949 fastq.gz 34.3 GB
EGAF00002464950 fastq.gz 29.2 GB
EGAF00002464951 fastq.gz 33.6 GB
EGAF00002464952 fastq.gz 30.8 GB
EGAF00002464953 fastq.gz 35.6 GB
EGAF00002464954 fastq.gz 29.8 GB
EGAF00002464955 fastq.gz 33.9 GB
EGAF00002464956 fastq.gz 25.9 GB
EGAF00002464957 fastq.gz 29.8 GB
EGAF00002464958 fastq.gz 27.2 GB
EGAF00002464959 fastq.gz 31.6 GB
EGAF00002464960 fastq.gz 25.6 GB
EGAF00002464961 fastq.gz 29.2 GB
EGAF00002464962 fastq.gz 25.8 GB
EGAF00002464963 fastq.gz 29.7 GB
EGAF00002464964 fastq.gz 24.9 GB
EGAF00002464965 fastq.gz 28.5 GB
EGAF00002464966 fastq.gz 26.9 GB
EGAF00002464967 fastq.gz 30.3 GB
EGAF00002464968 fastq.gz 28.5 GB
EGAF00002464969 fastq.gz 32.9 GB
EGAF00002464970 fastq.gz 31.6 GB
EGAF00002464971 fastq.gz 35.5 GB
EGAF00002464972 fastq.gz 29.1 GB
EGAF00002464973 fastq.gz 32.9 GB
EGAF00002464974 fastq.gz 32.9 GB
EGAF00002464975 fastq.gz 37.5 GB
EGAF00002464976 fastq.gz 29.7 GB
EGAF00002464977 fastq.gz 35.0 GB
EGAF00002464978 fastq.gz 37.3 GB
EGAF00002464979 fastq.gz 43.4 GB
EGAF00002464980 fastq.gz 28.6 GB
EGAF00002464981 fastq.gz 32.3 GB
EGAF00002464982 fastq.gz 28.5 GB
EGAF00002464983 fastq.gz 32.3 GB
EGAF00002464984 fastq.gz 30.7 GB
EGAF00002464985 fastq.gz 34.5 GB
EGAF00002464986 fastq.gz 35.0 GB
EGAF00002464987 fastq.gz 41.0 GB
EGAF00002464988 fastq.gz 31.1 GB
EGAF00002464989 fastq.gz 35.5 GB
EGAF00002464990 fastq.gz 31.5 GB
EGAF00002464991 fastq.gz 35.8 GB
EGAF00002464992 fastq.gz 35.3 GB
EGAF00002464993 fastq.gz 40.2 GB
EGAF00002464994 fastq.gz 26.9 GB
EGAF00002464995 fastq.gz 31.1 GB
EGAF00002464996 fastq.gz 28.1 GB
EGAF00002464997 fastq.gz 32.3 GB
EGAF00002464998 fastq.gz 21.4 GB
EGAF00002464999 fastq.gz 23.2 GB
EGAF00002465000 fastq.gz 25.8 GB
EGAF00002465001 fastq.gz 30.5 GB
EGAF00002465002 fastq.gz 29.9 GB
EGAF00002465003 fastq.gz 34.8 GB
EGAF00002465004 fastq.gz 27.6 GB
EGAF00002465005 fastq.gz 31.3 GB
EGAF00002465006 fastq.gz 30.7 GB
EGAF00002465007 fastq.gz 35.1 GB
EGAF00002465008 fastq.gz 27.9 GB
EGAF00002465009 fastq.gz 32.2 GB
EGAF00002465010 fastq.gz 26.0 GB
EGAF00002465011 fastq.gz 29.4 GB
EGAF00002465012 fastq.gz 26.9 GB
EGAF00002465013 fastq.gz 30.6 GB
EGAF00002465014 fastq.gz 29.6 GB
EGAF00002465015 fastq.gz 34.0 GB
EGAF00002465016 fastq.gz 28.6 GB
EGAF00002465017 fastq.gz 32.8 GB
EGAF00002465018 fastq.gz 32.6 GB
EGAF00002465019 fastq.gz 37.0 GB
EGAF00002465020 fastq.gz 28.9 GB
EGAF00002465021 fastq.gz 32.7 GB
EGAF00002465022 fastq.gz 27.1 GB
EGAF00002465023 fastq.gz 31.5 GB
EGAF00002465024 fastq.gz 28.0 GB
EGAF00002465025 fastq.gz 32.1 GB
EGAF00002465026 fastq.gz 27.7 GB
EGAF00002465027 fastq.gz 32.5 GB
EGAF00002465028 fastq.gz 28.3 GB
EGAF00002465029 fastq.gz 31.8 GB
EGAF00002465030 fastq.gz 28.3 GB
EGAF00002465031 fastq.gz 32.7 GB
EGAF00002465032 fastq.gz 31.6 GB
EGAF00002465033 fastq.gz 36.0 GB
EGAF00002465034 fastq.gz 30.3 GB
EGAF00002465035 fastq.gz 34.2 GB
EGAF00002465036 fastq.gz 29.4 GB
EGAF00002465037 fastq.gz 32.6 GB
EGAF00002465038 fastq.gz 35.7 GB
EGAF00002465039 fastq.gz 39.4 GB
EGAF00002465040 fastq.gz 37.1 GB
EGAF00002465041 fastq.gz 43.8 GB
EGAF00002465042 fastq.gz 34.7 GB
EGAF00002465043 fastq.gz 40.6 GB
EGAF00002465044 fastq.gz 34.8 GB
EGAF00002465045 fastq.gz 39.3 GB
EGAF00002465046 fastq.gz 30.8 GB
EGAF00002465047 fastq.gz 34.5 GB
EGAF00002465048 fastq.gz 34.6 GB
EGAF00002465049 fastq.gz 39.0 GB
EGAF00002465050 fastq.gz 32.0 GB
EGAF00002465051 fastq.gz 36.4 GB
EGAF00002465052 fastq.gz 27.3 GB
EGAF00002465053 fastq.gz 30.8 GB
EGAF00002465054 fastq.gz 29.0 GB
EGAF00002465055 fastq.gz 33.2 GB
EGAF00002465056 fastq.gz 25.4 GB
EGAF00002465057 fastq.gz 29.0 GB
EGAF00002465058 fastq.gz 28.0 GB
EGAF00002465059 fastq.gz 32.1 GB
EGAF00002465060 fastq.gz 28.4 GB
EGAF00002465061 fastq.gz 32.4 GB
EGAF00002465062 fastq.gz 27.6 GB
EGAF00002465063 fastq.gz 31.6 GB
EGAF00002465064 fastq.gz 25.2 GB
EGAF00002465065 fastq.gz 29.3 GB
EGAF00002465066 fastq.gz 28.9 GB
EGAF00002465067 fastq.gz 32.6 GB
EGAF00002465068 fastq.gz 33.0 GB
EGAF00002465069 fastq.gz 37.0 GB
EGAF00002465070 fastq.gz 28.0 GB
EGAF00002465071 fastq.gz 32.2 GB
EGAF00002465072 fastq.gz 32.1 GB
EGAF00002465073 fastq.gz 36.3 GB
EGAF00002465074 fastq.gz 28.1 GB
EGAF00002465075 fastq.gz 30.5 GB
EGAF00002465076 fastq.gz 33.3 GB
EGAF00002465077 fastq.gz 37.5 GB
EGAF00002465078 fastq.gz 28.5 GB
EGAF00002465079 fastq.gz 33.0 GB
EGAF00002465080 fastq.gz 31.5 GB
EGAF00002465081 fastq.gz 35.5 GB
EGAF00002465082 fastq.gz 30.0 GB
EGAF00002465083 fastq.gz 34.7 GB
EGAF00002465084 fastq.gz 28.6 GB
EGAF00002465085 fastq.gz 36.0 GB
EGAF00002465086 fastq.gz 25.4 GB
EGAF00002465087 fastq.gz 28.7 GB
EGAF00002465088 fastq.gz 37.1 GB
EGAF00002465089 fastq.gz 38.1 GB
EGAF00002465090 fastq.gz 35.9 GB
EGAF00002465091 fastq.gz 37.3 GB
EGAF00002465092 fastq.gz 30.2 GB
EGAF00002465093 fastq.gz 34.4 GB
EGAF00002465094 fastq.gz 26.5 GB
EGAF00002465095 fastq.gz 29.2 GB
EGAF00002465096 fastq.gz 30.4 GB
EGAF00002465097 fastq.gz 35.2 GB
EGAF00002465098 fastq.gz 27.6 GB
EGAF00002465099 fastq.gz 31.6 GB
EGAF00002465100 fastq.gz 29.1 GB
EGAF00002465101 fastq.gz 33.4 GB
EGAF00002465102 fastq.gz 31.0 GB
EGAF00002465103 fastq.gz 35.8 GB
EGAF00002465104 fastq.gz 27.9 GB
EGAF00002465105 fastq.gz 32.4 GB
EGAF00002465106 fastq.gz 35.2 GB
EGAF00002465107 fastq.gz 40.2 GB
EGAF00002465108 fastq.gz 27.5 GB
EGAF00002465109 fastq.gz 31.0 GB
EGAF00002465110 fastq.gz 25.6 GB
EGAF00002465111 fastq.gz 29.2 GB
EGAF00002465112 fastq.gz 34.1 GB
EGAF00002465113 fastq.gz 38.6 GB
EGAF00002465114 fastq.gz 28.4 GB
EGAF00002465115 fastq.gz 32.8 GB
EGAF00002465116 fastq.gz 30.8 GB
EGAF00002465117 fastq.gz 34.4 GB
EGAF00002465118 fastq.gz 27.7 GB
EGAF00002465119 fastq.gz 30.8 GB
EGAF00002465120 fastq.gz 26.0 GB
EGAF00002465121 fastq.gz 29.4 GB
EGAF00002465122 fastq.gz 31.8 GB
EGAF00002465123 fastq.gz 34.8 GB
EGAF00002465124 fastq.gz 25.9 GB
EGAF00002465125 fastq.gz 30.0 GB
EGAF00002465126 fastq.gz 27.6 GB
EGAF00002465127 fastq.gz 32.0 GB
EGAF00002465128 fastq.gz 32.4 GB
EGAF00002465129 fastq.gz 36.9 GB
EGAF00002465130 fastq.gz 29.5 GB
EGAF00002465131 fastq.gz 34.4 GB
EGAF00002465132 fastq.gz 25.2 GB
EGAF00002465133 fastq.gz 27.7 GB
EGAF00002465134 fastq.gz 30.0 GB
EGAF00002465135 fastq.gz 34.3 GB
EGAF00002465136 fastq.gz 35.5 GB
EGAF00002465137 fastq.gz 38.6 GB
EGAF00002465138 fastq.gz 36.5 GB
EGAF00002465139 fastq.gz 39.9 GB
EGAF00002465140 fastq.gz 27.6 GB
EGAF00002465141 fastq.gz 32.1 GB
EGAF00002465142 fastq.gz 29.5 GB
EGAF00002465143 fastq.gz 33.2 GB
EGAF00002465144 fastq.gz 32.2 GB
EGAF00002465145 fastq.gz 37.1 GB
EGAF00002465146 fastq.gz 31.9 GB
EGAF00002465147 fastq.gz 36.9 GB
EGAF00002465148 fastq.gz 28.6 GB
EGAF00002465149 fastq.gz 32.4 GB
EGAF00002465150 fastq.gz 24.9 GB
EGAF00002465151 fastq.gz 27.8 GB
EGAF00002465152 fastq.gz 31.6 GB
EGAF00002465153 fastq.gz 35.2 GB
EGAF00002465154 fastq.gz 31.6 GB
EGAF00002465155 fastq.gz 36.3 GB
EGAF00002465156 fastq.gz 28.8 GB
EGAF00002465157 fastq.gz 32.8 GB
EGAF00002465158 fastq.gz 27.4 GB
EGAF00002465159 fastq.gz 31.8 GB
EGAF00002465160 fastq.gz 37.2 GB
EGAF00002465161 fastq.gz 41.6 GB
EGAF00002465162 fastq.gz 28.2 GB
EGAF00002465163 fastq.gz 32.2 GB
EGAF00002465164 fastq.gz 32.8 GB
EGAF00002465165 fastq.gz 37.7 GB
EGAF00002465166 fastq.gz 26.0 GB
EGAF00002465167 fastq.gz 29.7 GB
EGAF00002465168 fastq.gz 32.2 GB
EGAF00002465169 fastq.gz 36.6 GB
EGAF00002465170 fastq.gz 27.7 GB
EGAF00002465171 fastq.gz 31.2 GB
EGAF00002465172 fastq.gz 31.6 GB
EGAF00002465173 fastq.gz 36.3 GB
EGAF00002465174 fastq.gz 29.4 GB
EGAF00002465175 fastq.gz 33.6 GB
EGAF00002465176 fastq.gz 29.0 GB
EGAF00002465177 fastq.gz 32.6 GB
EGAF00002540115 fastq.gz 27.9 GB
EGAF00002540116 fastq.gz 31.9 GB
370 Files (11.7 TB)