About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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WGS data of patients diagnosed with NKTL

Whole-genome sequencing (WGS) was performed for 50 pairs of tumor-normal samples from patients diagnosed with NKTL. Genomic DNA from tumor tissue was extracted with QIAamp DNA Mini Kit. The DNA for the matching normal was obtained from blood or buccal swabs and purified by Blood and Cell Culture DNA Mini kit or E.Z.N.A. Tissue DNA Kit (Omega Bio-tek) according to manufacturer’s instructions. The quantity and quality were assessed by Quant-iT PicoGreen dsDNA Assay Kit (Invitrogen) and agarose gel electrophoresis. All sequencing libraries were prepared using TruSeq Nano DNA Library Prep Kit (Illumina). Paired-end sequencing was performed on Illumina HiSeq 2000 or HiSeq X Ten as 2x101 bp or 2x151 bp, respectively.

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Data access policy for NKTL study. National Cancer Centre Singapore.

Contact corresponding author for data access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003828 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00001589934 fastq.gz 70.8 GB Report
EGAF00001589935 fastq.gz 82.2 GB Report
EGAF00001589936 fastq.gz 69.5 GB Report
EGAF00001589937 fastq.gz 80.2 GB Report
EGAF00001589938 fastq.gz 64.1 GB Report
EGAF00001589939 fastq.gz 63.6 GB Report
EGAF00001589940 fastq.gz 68.3 GB Report
EGAF00001589941 fastq.gz 68.7 GB Report
EGAF00001589942 fastq.gz 64.9 GB Report
EGAF00001589943 fastq.gz 64.5 GB Report
EGAF00001589944 fastq.gz 64.5 GB Report
EGAF00001589945 fastq.gz 64.1 GB Report
EGAF00001589946 fastq.gz 27.9 GB Report
EGAF00001589947 fastq.gz 32.4 GB Report
EGAF00001589948 fastq.gz 84.9 GB Report
EGAF00001589949 fastq.gz 98.0 GB Report
EGAF00001589950 fastq.gz 30.7 GB Report
EGAF00001589951 fastq.gz 35.4 GB Report
EGAF00001589952 fastq.gz 63.2 GB Report
EGAF00001589953 fastq.gz 72.6 GB Report
EGAF00001589954 fastq.gz 39.3 GB Report
EGAF00001589955 fastq.gz 45.7 GB Report
EGAF00001589956 fastq.gz 36.1 GB Report
EGAF00001589957 fastq.gz 41.7 GB Report
EGAF00001589958 fastq.gz 46.8 GB Report
EGAF00001589959 fastq.gz 50.3 GB Report
EGAF00001589960 fastq.gz 43.5 GB Report
EGAF00001589961 fastq.gz 45.6 GB Report
EGAF00001589962 fastq.gz 33.2 GB Report
EGAF00001589963 fastq.gz 36.8 GB Report
EGAF00001589964 fastq.gz 31.8 GB Report
EGAF00001589965 fastq.gz 35.4 GB Report
EGAF00001589966 fastq.gz 30.6 GB Report
EGAF00001589967 fastq.gz 33.9 GB Report
EGAF00001589968 fastq.gz 31.2 GB Report
EGAF00001589969 fastq.gz 34.6 GB Report
EGAF00001589970 fastq.gz 43.0 GB Report
EGAF00001589971 fastq.gz 48.0 GB Report
EGAF00001589972 fastq.gz 45.2 GB Report
EGAF00001589973 fastq.gz 49.7 GB Report
EGAF00001589974 fastq.gz 48.7 GB Report
EGAF00001589975 fastq.gz 51.5 GB Report
EGAF00001589976 fastq.gz 44.6 GB Report
EGAF00001589977 fastq.gz 48.7 GB Report
EGAF00001589978 fastq.gz 30.7 GB Report
EGAF00001589979 fastq.gz 35.9 GB Report
EGAF00001589980 fastq.gz 67.3 GB Report
EGAF00001589981 fastq.gz 78.1 GB Report
EGAF00001589982 fastq.gz 29.8 GB Report
EGAF00001589983 fastq.gz 34.5 GB Report
EGAF00001589984 fastq.gz 59.2 GB Report
EGAF00001589985 fastq.gz 66.5 GB Report
EGAF00001589986 fastq.gz 32.8 GB Report
EGAF00001589987 fastq.gz 37.9 GB Report
EGAF00001589988 fastq.gz 64.6 GB Report
EGAF00001589989 fastq.gz 72.8 GB Report
EGAF00001589990 fastq.gz 72.6 GB Report
EGAF00001589991 fastq.gz 81.3 GB Report
EGAF00001589992 fastq.gz 69.8 GB Report
EGAF00001589993 fastq.gz 80.1 GB Report
EGAF00001589994 fastq.gz 34.6 GB Report
EGAF00001589995 fastq.gz 40.3 GB Report
EGAF00001589996 fastq.gz 60.4 GB Report
EGAF00001589997 fastq.gz 69.6 GB Report
EGAF00001589998 fastq.gz 32.3 GB Report
EGAF00001589999 fastq.gz 36.9 GB Report
EGAF00001590000 fastq.gz 78.9 GB Report
EGAF00001590001 fastq.gz 88.7 GB Report
EGAF00001590002 fastq.gz 32.4 GB Report
EGAF00001590003 fastq.gz 37.0 GB Report
EGAF00001590004 fastq.gz 62.7 GB Report
EGAF00001590005 fastq.gz 70.2 GB Report
EGAF00001590006 fastq.gz 33.5 GB Report
EGAF00001590007 fastq.gz 38.2 GB Report
EGAF00001590008 fastq.gz 55.6 GB Report
EGAF00001590009 fastq.gz 64.7 GB Report
EGAF00001590010 fastq.gz 31.6 GB Report
EGAF00001590011 fastq.gz 35.7 GB Report
EGAF00001590012 fastq.gz 80.5 GB Report
EGAF00001590013 fastq.gz 90.4 GB Report
EGAF00001590014 fastq.gz 30.5 GB Report
EGAF00001590015 fastq.gz 34.6 GB Report
EGAF00001590016 fastq.gz 62.3 GB Report
EGAF00001590017 fastq.gz 70.0 GB Report
EGAF00001590018 fastq.gz 49.2 GB Report
EGAF00001590019 fastq.gz 59.5 GB Report
EGAF00001590020 fastq.gz 60.9 GB Report
EGAF00001590021 fastq.gz 69.2 GB Report
EGAF00001590022 fastq.gz 33.2 GB Report
EGAF00001590023 fastq.gz 38.8 GB Report
EGAF00001590024 fastq.gz 61.9 GB Report
EGAF00001590025 fastq.gz 71.6 GB Report
EGAF00001590026 fastq.gz 32.0 GB Report
EGAF00001590027 fastq.gz 37.6 GB Report
EGAF00001590028 fastq.gz 62.3 GB Report
EGAF00001590029 fastq.gz 71.9 GB Report
EGAF00001590030 fastq.gz 29.9 GB Report
EGAF00001590031 fastq.gz 34.9 GB Report
EGAF00001590032 fastq.gz 61.4 GB Report
EGAF00001590033 fastq.gz 70.6 GB Report
EGAF00001590034 fastq.gz 30.3 GB Report
EGAF00001590035 fastq.gz 35.2 GB Report
EGAF00001590036 fastq.gz 66.2 GB Report
EGAF00001590037 fastq.gz 76.9 GB Report
EGAF00001590038 fastq.gz 59.3 GB Report
EGAF00001590039 fastq.gz 68.1 GB Report
EGAF00001590040 fq.gz 67.4 GB
EGAF00001590041 fq.gz 74.3 GB
EGAF00002010819 fastq.gz 34.1 GB Report
EGAF00002010820 fastq.gz 37.7 GB Report
EGAF00002010821 fastq.gz 33.7 GB Report
EGAF00002010822 fastq.gz 37.4 GB Report
EGAF00002010825 fastq.gz 28.5 GB Report
EGAF00002010826 fastq.gz 34.5 GB Report
EGAF00002010827 fastq.gz 33.7 GB Report
EGAF00002010828 fastq.gz 40.1 GB Report
EGAF00002010829 fastq.gz 33.3 GB Report
EGAF00002010830 fastq.gz 40.4 GB Report
EGAF00002010831 fastq.gz 21.5 GB Report
EGAF00002010832 fastq.gz 24.2 GB Report
EGAF00002010833 fastq.gz 33.6 GB Report
EGAF00002010834 fastq.gz 40.9 GB Report
EGAF00002010835 fastq.gz 34.2 GB Report
EGAF00002010836 fastq.gz 40.1 GB Report
EGAF00002010837 fastq.gz 59.4 GB Report
EGAF00002010838 fastq.gz 71.2 GB Report
EGAF00002010839 fastq.gz 61.3 GB Report
EGAF00002010840 fastq.gz 74.7 GB Report
EGAF00002010843 fastq.gz 63.1 GB Report
EGAF00002010844 fastq.gz 77.1 GB Report
EGAF00002010845 fastq.gz 60.7 GB Report
EGAF00002010846 fastq.gz 73.1 GB Report
EGAF00002010847 fastq.gz 63.3 GB Report
EGAF00002010848 fastq.gz 76.1 GB Report
EGAF00002010849 fastq.gz 62.6 GB Report
EGAF00002010850 fastq.gz 74.4 GB Report
EGAF00002010851 fastq.gz 61.2 GB Report
EGAF00002010852 fastq.gz 72.1 GB Report
EGAF00002010853 fastq.gz 64.5 GB Report
EGAF00002010854 fastq.gz 77.5 GB Report
EGAF00002015424 fastq.gz 60.6 GB Report
EGAF00002015425 fastq.gz 71.2 GB Report
EGAF00002015426 fastq.gz 30.7 GB Report
EGAF00002015427 fastq.gz 37.5 GB Report
EGAF00002015428 fastq.gz 25.4 GB Report
EGAF00002015429 fastq.gz 31.3 GB Report
EGAF00002015430 fastq.gz 30.0 GB Report
EGAF00002015431 fastq.gz 32.5 GB Report
EGAF00002015432 fastq.gz 29.8 GB Report
EGAF00002015433 fastq.gz 32.5 GB Report
EGAF00002015434 fastq.gz 27.4 GB Report
EGAF00002015435 fastq.gz 30.0 GB Report
EGAF00002015436 fastq.gz 61.1 GB Report
EGAF00002015437 fastq.gz 70.6 GB Report
EGAF00002015438 fastq.gz 68.9 GB Report
EGAF00002015439 fastq.gz 79.2 GB Report
EGAF00002015440 fastq.gz 74.2 GB Report
EGAF00002015441 fastq.gz 85.3 GB Report
EGAF00002015442 fastq.gz 107.9 GB Report
EGAF00002015443 fastq.gz 120.2 GB Report
EGAF00002015444 fastq.gz 106.2 GB Report
EGAF00002015445 fastq.gz 118.7 GB Report
EGAF00002015446 fastq.gz 111.3 GB Report
EGAF00002015447 fastq.gz 125.0 GB Report
EGAF00002036188 fastq.gz 36.6 GB Report
EGAF00002036189 fastq.gz 45.5 GB Report
EGAF00002036190 fastq.gz 102.0 GB Report
EGAF00002036191 fastq.gz 114.6 GB Report
EGAF00002051981 fastq.gz 30.5 GB Report
EGAF00002051982 fastq.gz 35.9 GB Report
EGAF00002051983 fastq.gz 77.7 GB Report
EGAF00002051984 fastq.gz 96.2 GB Report
EGAF00002051985 fastq.gz 27.4 GB Report
EGAF00002051986 fastq.gz 32.2 GB Report
EGAF00002051987 fastq.gz 75.8 GB Report
EGAF00002051988 fastq.gz 93.9 GB Report
EGAF00002051989 fastq.gz 30.4 GB Report
EGAF00002051990 fastq.gz 35.7 GB Report
EGAF00002051991 fastq.gz 71.3 GB Report
EGAF00002051992 fastq.gz 88.4 GB Report
EGAF00002548963 fastq.gz 23.4 GB Report
EGAF00002548964 fastq.gz 24.7 GB Report
EGAF00002548965 fastq.gz 63.9 GB Report
EGAF00002548966 fastq.gz 67.3 GB Report
EGAF00002548967 fastq.gz 33.4 GB Report
EGAF00002548968 fastq.gz 35.9 GB Report
EGAF00002548969 fastq.gz 58.4 GB Report
EGAF00002548970 fastq.gz 59.9 GB Report
EGAF00002548971 fastq.gz 30.5 GB Report
EGAF00002548972 fastq.gz 33.4 GB Report
EGAF00002548973 fastq.gz 74.3 GB Report
EGAF00002548974 fastq.gz 76.2 GB Report
EGAF00002548979 fastq.gz 36.6 GB Report
EGAF00002548980 fastq.gz 38.6 GB Report
EGAF00002548981 fastq.gz 72.0 GB Report
EGAF00002548982 fastq.gz 76.1 GB Report
EGAF00002548987 fastq.gz 31.1 GB Report
EGAF00002548988 fastq.gz 34.2 GB Report
EGAF00002548989 fastq.gz 58.1 GB Report
EGAF00002548990 fastq.gz 62.8 GB Report
EGAF00002548991 fastq.gz 34.2 GB Report
EGAF00002548992 fastq.gz 35.9 GB Report
EGAF00002548993 fastq.gz 65.9 GB Report
EGAF00002548994 fastq.gz 69.4 GB Report
EGAF00002548995 fastq.gz 27.8 GB Report
EGAF00002548996 fastq.gz 29.0 GB Report
EGAF00002548997 fastq.gz 63.2 GB Report
EGAF00002548998 fastq.gz 66.4 GB Report
EGAF00002548999 fastq.gz 47.8 GB Report
EGAF00002549000 fastq.gz 50.2 GB Report
EGAF00002549001 fastq.gz 70.0 GB Report
EGAF00002549002 fastq.gz 74.2 GB Report
EGAF00002549003 fastq.gz 37.5 GB Report
EGAF00002549004 fastq.gz 40.7 GB Report
EGAF00002549005 fastq.gz 77.6 GB Report
EGAF00002549006 fastq.gz 82.3 GB Report
EGAF00002549011 fastq.gz 34.4 GB Report
EGAF00002549012 fastq.gz 36.1 GB Report
EGAF00002549013 fastq.gz 56.1 GB Report
EGAF00002549014 fastq.gz 59.8 GB Report
EGAF00002549015 fastq.gz 36.9 GB Report
EGAF00002549016 fastq.gz 38.2 GB Report
EGAF00002549017 fastq.gz 62.7 GB Report
EGAF00002549018 fastq.gz 65.8 GB Report
EGAF00002549019 fastq.gz 41.7 GB Report
EGAF00002549020 fastq.gz 43.5 GB Report
EGAF00002549021 fastq.gz 58.5 GB Report
EGAF00002549022 fastq.gz 61.3 GB Report
EGAF00002549023 fastq.gz 35.3 GB Report
EGAF00002549024 fastq.gz 37.4 GB Report
EGAF00002549025 fastq.gz 75.5 GB Report
EGAF00002549026 fastq.gz 79.5 GB Report
EGAF00002549027 fastq.gz 34.0 GB Report
EGAF00002549028 fastq.gz 36.6 GB Report
EGAF00002549029 fastq.gz 62.1 GB Report
EGAF00002549030 fastq.gz 64.1 GB Report
EGAF00002549031 fastq.gz 34.3 GB Report
EGAF00002549032 fastq.gz 37.8 GB Report
EGAF00002549033 fastq.gz 66.2 GB Report
EGAF00002549034 fastq.gz 71.8 GB Report
EGAF00002549035 fastq.gz 36.7 GB Report
EGAF00002549036 fastq.gz 40.2 GB Report
EGAF00002549037 fastq.gz 63.7 GB Report
EGAF00002549038 fastq.gz 67.4 GB Report
EGAF00002549039 fastq.gz 31.7 GB Report
EGAF00002549040 fastq.gz 33.0 GB Report
EGAF00002549041 fq.gz 66.7 GB Report
EGAF00002549042 fq.gz 68.5 GB Report
EGAF00002549043 fastq.gz 38.5 GB Report
EGAF00002549044 fastq.gz 40.3 GB Report
EGAF00002549045 fq.gz 59.3 GB Report
EGAF00002549046 fq.gz 63.6 GB Report
EGAF00007134864 fastq.gz 29.0 GB
EGAF00007134865 fastq.gz 30.0 GB
EGAF00007134866 fastq.gz 26.4 GB
EGAF00007134867 fastq.gz 26.6 GB
EGAF00007134868 fastq.gz 55.7 GB
EGAF00007134869 fastq.gz 57.5 GB
EGAF00007134870 fastq.gz 52.9 GB
EGAF00007134871 fastq.gz 54.1 GB
260 Files (14.0 TB)