RNA-sequencing

RNA-sequencing for a cohort of B-ALL samples : 5 Down Syndrome (DS), 16 Hyperdiploid (HeH), 6 iAMP21, 9 other. RNA-sequencing for B-cell progenitors from 3 healthy. It also contains RNA-sequencing datasets of Patient-Derived Xenografts (X) developed from the B-ALL samples : 4 Down Syndrome (DS), 4 Hyperdiploid (HeH), 1 iAMP21, 3 other.

10/10/2019
51 samples
DAC: EGAC00001001348
Technology: Illumina HiSeq 2000

Access Policy1 Study Files

Metadata

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This study combine Whole Exome Sequencing and RNA-sequencing for a cohort of 44 B-ALL samples. It also contains RNA-sequencing datasets of Patient-Derived Xenografts developed from the B-ALL samples.

In order to grant access, we are requiring a written description of the purpose of the research to be done Commitments - not to try to identify or contact the donor subjects - to use data only for the submitted study - not to redistribute controlled access data

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001003760	Genetics and transcriptomes of pediatric B cell precursor leukemia with gain of chromosome 21	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size	Quality Report
EGAF00002799952	fastq.gz	5.2 GB	Report
EGAF00002799953	fastq.gz	5.2 GB	Report
EGAF00002799954	fastq.gz	3.6 GB	Report
EGAF00002799955	fastq.gz	3.7 GB	Report
EGAF00002799956	fastq.gz	3.6 GB	Report
EGAF00002799957	fastq.gz	3.6 GB	Report
EGAF00002799958	fastq.gz	4.0 GB	Report
EGAF00002799959	fastq.gz	4.1 GB	Report
EGAF00002799960	fastq.gz	8.1 GB	Report
EGAF00002799961	fastq.gz	8.2 GB	Report
EGAF00002799962	fastq.gz	4.4 GB	Report
EGAF00002799963	fastq.gz	4.2 GB	Report
EGAF00002799964	fastq.gz	6.0 GB	Report
EGAF00002799965	fastq.gz	5.7 GB	Report
EGAF00002799966	fastq.gz	5.3 GB	Report
EGAF00002799967	fastq.gz	5.1 GB	Report
EGAF00002799968	fastq.gz	704.1 MB	Report
EGAF00002799969	fastq.gz	703.3 MB	Report
EGAF00002799970	fastq.gz	3.5 GB	Report
EGAF00002799971	fastq.gz	3.6 GB	Report
EGAF00002799972	fastq.gz	7.1 GB	Report
EGAF00002799973	fastq.gz	7.2 GB	Report
EGAF00002799974	fastq.gz	5.4 GB	Report
EGAF00002799975	fastq.gz	5.2 GB	Report
EGAF00002799976	fastq.gz	4.0 GB	Report
EGAF00002799977	fastq.gz	4.2 GB	Report
EGAF00002799978	fastq.gz	5.3 GB	Report
EGAF00002799979	fastq.gz	5.0 GB	Report
EGAF00002799980	fastq.gz	5.8 GB	Report
EGAF00002799981	fastq.gz	5.5 GB	Report
EGAF00002799982	fastq.gz	3.4 GB	Report
EGAF00002799983	fastq.gz	3.7 GB	Report
EGAF00002799984	fastq.gz	5.7 GB	Report
EGAF00002799985	fastq.gz	6.2 GB	Report
EGAF00002799986	fastq.gz	2.9 GB	Report
EGAF00002799987	fastq.gz	3.0 GB	Report
EGAF00002800026	fastq.gz	3.4 GB	Report
EGAF00002800027	fastq.gz	3.4 GB	Report
EGAF00002800028	fastq.gz	4.0 GB	Report
EGAF00002800029	fastq.gz	4.1 GB	Report
EGAF00002800030	fastq.gz	3.1 GB	Report
EGAF00002800031	fastq.gz	3.1 GB	Report
EGAF00002800032	fastq.gz	5.4 GB	Report
EGAF00002800033	fastq.gz	5.5 GB	Report
EGAF00002800034	fastq.gz	11.1 GB	Report
EGAF00002800035	fastq.gz	11.2 GB	Report
EGAF00002800036	fastq.gz	1.1 GB	Report
EGAF00002800037	fastq.gz	1.1 GB	Report
EGAF00002800038	fastq.gz	8.5 GB	Report
EGAF00002800039	fastq.gz	8.6 GB	Report
EGAF00002800040	fastq.gz	4.0 GB	Report
EGAF00002800041	fastq.gz	4.1 GB	Report
EGAF00002800042	fastq.gz	5.4 GB	Report
EGAF00002800043	fastq.gz	5.5 GB	Report
EGAF00002800044	fastq.gz	3.5 GB	Report
EGAF00002800045	fastq.gz	3.5 GB	Report
EGAF00002800046	fastq.gz	3.7 GB	Report
EGAF00002800047	fastq.gz	4.6 GB	Report
EGAF00002800048	fastq.gz	6.5 GB	Report
EGAF00002800049	fastq.gz	6.5 GB	Report
EGAF00002800050	gz	2.6 GB	Report
EGAF00002800051	gz	3.1 GB	Report
EGAF00002800052	fastq.gz	5.8 GB	Report
EGAF00002800053	fastq.gz	5.8 GB	Report
EGAF00002800096	fastq.gz	9.9 GB	Report
EGAF00002800097	fastq.gz	9.9 GB	Report
EGAF00002800098	fastq.gz	7.2 GB	Report
EGAF00002800099	fastq.gz	7.2 GB	Report
EGAF00002800100	fastq.gz	8.5 GB	Report
EGAF00002800101	fastq.gz	8.5 GB	Report
EGAF00002800102	fastq.gz	7.1 GB	Report
EGAF00002800103	fastq.gz	7.1 GB	Report
EGAF00002800104	fastq.gz	7.8 GB	Report
EGAF00002800105	fastq.gz	7.8 GB	Report
EGAF00002800106	fastq.gz	7.5 GB	Report
EGAF00002800107	fastq.gz	7.3 GB	Report
EGAF00002800108	fastq.gz	3.4 GB	Report
EGAF00002800109	fastq.gz	3.6 GB	Report
EGAF00002800110	fastq.gz	5.3 GB	Report
EGAF00002800111	fastq.gz	4.9 GB	Report
EGAF00002800112	fastq.gz	6.3 GB	Report
EGAF00002800113	fastq.gz	6.3 GB	Report
EGAF00002800114	fastq.gz	7.5 GB	Report
EGAF00002800115	fastq.gz	7.2 GB	Report
EGAF00002800116	fastq.gz	10.3 GB	Report
EGAF00002800117	fastq.gz	10.3 GB	Report
EGAF00002800118	fastq.gz	5.4 GB	Report
EGAF00002800119	fastq.gz	5.0 GB	Report
EGAF00002800120	fastq.gz	6.3 GB	Report
EGAF00002800121	fastq.gz	6.0 GB	Report
EGAF00002800122	fastq.gz	5.7 GB	Report
EGAF00002800123	fastq.gz	5.6 GB	Report
EGAF00002800124	fastq.gz	8.1 GB	Report
EGAF00002800125	fastq.gz	7.7 GB	Report
EGAF00002800126	fastq.gz	6.3 GB	Report
EGAF00002800127	fastq.gz	6.0 GB	Report
EGAF00002800128	fastq.gz	5.7 GB	Report
EGAF00002800129	fastq.gz	5.5 GB	Report
EGAF00002800130	fastq.gz	4.4 GB	Report
EGAF00002800131	fastq.gz	4.3 GB	Report
EGAF00002800132	fastq.gz	9.6 GB	Report
EGAF00002800133	fastq.gz	9.7 GB	Report
102 Files (568.9 GB)