About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Bam files for a metastatic bladder cancer patient with BAP1 variants

This dataset consists of three bam files (two cell-free DNA and one germline DNA) from a metastatic bladder cancer patient with BAP1 variants. Bam files were generated from targeted Illumina sequencing data.

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Access policy for the BAP1 sequencing data.

A data access agreement (DAA), based on the example DAA provided by EGA, is to be filled out by the requester and BAP1 Data Access Committee.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004055 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00002872428 bam 195.4 MB Report
EGAF00002872429 bam 2.1 GB
EGAF00002872430 bam 1.8 GB
3 Files (4.0 GB)