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DESIGN-NKI RNA-seq

RNA-Seq data of 36 HPV-negative HNSCC specimens from patients treated at The Netherlands Cancer Institute, Amsterdam. HNSCC biopsy samples obtained prior to treatment (chemo-radiotherapy) were used for polyA mRNA sequencing.

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DESIGN-NKI Policy

To request access to this dataset, please contact the Data Access Committee HNSCC_DAC_DESIGN. Data Access Requests for this dataset should include the following information: - Recipient and Recipient Institution - Details of dataset requested, i.e. EGA Study and EGA Dataset Accession Number(s) - Study objective and brief abstract of the project in which the data will be used (500 words) - List of individuals who will be allowed access to the requested datasets by the Recipient and/or Recipient Institution - Policy name (DESIGN-NKI) assigned to this dataset Data Access Request for this dataset will be reviewed by the Data Access Committee HNSCC_DAC_DESIGN. After receipt and review by the Data Access Committee, a Data Transfer Agreement will have to be completed, signed and returned to the HNSCC_DAC_DESIGN Data Access Committee, prior to being granted access to the requested dataset(s). For the avoidance of doubt, the HNSCC_DAC_DESIGN Data Access Committee reserves the right to withhold granting access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004090 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00003029765 bam 724.2 MB
EGAF00003029766 bam 573.7 MB
EGAF00003029767 bam 1.1 GB
EGAF00003029768 bam 887.9 MB
EGAF00003029773 bam 945.6 MB
EGAF00003029774 bam 852.6 MB
EGAF00003029775 bam 871.1 MB
EGAF00003029776 bam 711.5 MB
EGAF00003029777 bam 904.0 MB
EGAF00003029778 bam 860.3 MB
EGAF00003029779 bam 994.2 MB
EGAF00003029780 bam 611.4 MB
EGAF00003029782 bam 827.9 MB
EGAF00003029783 bam 800.1 MB
EGAF00003029784 bam 444.5 MB
EGAF00003029785 bam 893.9 MB
EGAF00003029787 bam 913.6 MB
EGAF00003029788 bam 539.0 MB
EGAF00003029790 bam 790.2 MB
EGAF00003029791 bam 555.8 MB
EGAF00003029793 bam 871.4 MB
EGAF00003029795 bam 917.0 MB
EGAF00003029797 bam 825.9 MB
EGAF00003029798 bam 1.2 GB
EGAF00003029799 bam 1.3 GB
EGAF00003029800 bam 604.4 MB
EGAF00003029802 bam 830.2 MB
EGAF00003029805 bam 1.7 GB
EGAF00003029807 bam 645.5 MB
EGAF00003029809 bam 664.7 MB
EGAF00003029810 bam 590.7 MB
EGAF00003029811 bam 742.7 MB
EGAF00003029812 bam 365.1 MB
EGAF00003029813 bam 1.2 GB
EGAF00003029816 bam 864.0 MB
EGAF00003029817 bam 893.9 MB
36 Files (29.9 GB)