Dataset

DESIGN-VUMC low coverage WGS

Dataset ID Technology Samples
EGAD00001005719 Illumina HiSeq 2000 37

Dataset Description

Low-coverage whole genome sequencing data of 37 HPV-negative HNSCC specimens from patients treated at the VU Medical Centre, Amsterdam. HNSCC biopsy samples obtained prior to treatment (chemo-radiotherapy) were used for WGS to a depth of approx. 0.5X.

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

HNSCC_DAC_DESIGN
Contact person: HNSCC_DAC_DESIGN
Email: dataaccesscommittee [dot] design [at] nki [dot] nl
More details: EGAC00001001422

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