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Pseudotime ordering of cell cycle state (2020-01-29)

We will be using G&T method to sequence single cell genome and transcriptome derived from FS13B iPSCs cell line. The cell cycle state of each of the single cells is known. Hence, we will be analysing the genome and transcriptome of single cells from each of the cell cycle state to generate a copy number profile and transcriptome profile per given cell cycle stage: G1, S, G2, S. . This dataset contains all the data available for this study on 2020-01-29.

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Wellcome Trust Sanger Institute Cancer Genome Group Data Sharing Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003293 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00002554505 cram 137.4 MB
EGAF00002554506 cram 123.1 MB
EGAF00002554507 cram 134.6 MB
EGAF00002554508 cram 107.6 MB
EGAF00002554509 cram 146.7 MB
EGAF00002554510 cram 147.5 MB
EGAF00002554511 cram 71.4 MB
EGAF00002554512 cram 83.9 MB
EGAF00002554513 cram 115.3 MB
EGAF00002554514 cram 103.6 MB
EGAF00002554515 cram 79.4 MB
EGAF00002554516 cram 76.6 MB
EGAF00002554517 cram 146.7 MB
EGAF00002554518 cram 178.2 MB
EGAF00002554519 cram 126.7 MB
EGAF00002554520 cram 93.8 MB
EGAF00002554521 cram 139.6 MB
EGAF00002554522 cram 97.3 MB
EGAF00002554523 cram 94.4 MB
EGAF00002554524 cram 81.3 MB
EGAF00002554525 cram 139.7 MB
EGAF00002554526 cram 138.9 MB
EGAF00002554527 cram 6.0 MB
EGAF00002554528 cram 76.6 MB
EGAF00002554529 cram 112.2 MB
EGAF00002554530 cram 104.0 MB
EGAF00002554531 cram 79.4 MB
EGAF00002554532 cram 92.7 MB
EGAF00002554533 cram 69.1 MB
EGAF00002554534 cram 84.1 MB
EGAF00002554535 cram 81.9 MB
EGAF00002554536 cram 79.4 MB
EGAF00002554537 cram 162.2 MB
EGAF00002554538 cram 138.3 MB
EGAF00002554539 cram 153.9 MB
EGAF00002554540 cram 161.0 MB
EGAF00002554541 cram 127.5 MB
EGAF00002554542 cram 106.6 MB
EGAF00002554543 cram 3.7 MB
EGAF00002554544 cram 13.1 MB
EGAF00002554545 cram 110.1 MB
EGAF00002554546 cram 199.2 MB
EGAF00002554547 cram 27.9 MB
EGAF00002554548 cram 122.3 MB
EGAF00002554549 cram 86.3 MB
EGAF00002554550 cram 92.3 MB
EGAF00002554551 cram 122.2 MB
EGAF00002554552 cram 101.3 MB
EGAF00002554553 cram 120.5 MB
EGAF00002554554 cram 119.8 MB
EGAF00002554555 cram 78.7 MB
EGAF00002554556 cram 84.0 MB
EGAF00002554557 cram 101.7 MB
EGAF00002554558 cram 159.7 MB
EGAF00002554559 cram 10.3 MB
EGAF00002554560 cram 855.0 kB
EGAF00002554624 cram 97.4 MB
EGAF00002554625 cram 203.7 MB
EGAF00002554626 cram 56.8 MB
EGAF00002554627 cram 56.5 MB
EGAF00002554628 cram 57.8 MB
EGAF00002554629 cram 54.6 MB
EGAF00002554630 cram 105.3 MB
EGAF00002554631 cram 106.3 MB
EGAF00002554632 cram 104.0 MB
EGAF00002554633 cram 168.8 MB
EGAF00002554634 cram 79.4 MB
EGAF00002554635 cram 112.8 MB
EGAF00002554636 cram 114.0 MB
EGAF00002554637 cram 105.2 MB
EGAF00002554638 cram 60.2 MB
EGAF00002554639 cram 122.2 MB
EGAF00002554640 cram 92.6 MB
EGAF00002554641 cram 99.9 MB
EGAF00002554642 cram 67.5 MB
EGAF00002554643 cram 74.7 MB
EGAF00002554644 cram 67.5 MB
EGAF00002554645 cram 67.8 MB
EGAF00002554646 cram 123.6 MB
EGAF00002554647 cram 102.2 MB
EGAF00002554648 cram 117.2 MB
EGAF00002554649 cram 107.7 MB
EGAF00002554650 cram 72.5 MB
EGAF00002554651 cram 81.6 MB
EGAF00002554652 cram 105.2 MB
EGAF00002554653 cram 113.5 MB
EGAF00002554654 cram 99.3 MB
EGAF00002554655 cram 108.4 MB
EGAF00002554656 cram 118.5 MB
EGAF00002554657 cram 77.8 MB
EGAF00002554658 cram 63.9 MB
EGAF00002554659 cram 56.2 MB
EGAF00002554660 cram 97.4 MB
EGAF00002554661 cram 93.4 MB
EGAF00002554662 cram 152.3 MB
EGAF00002554663 cram 83.6 MB
EGAF00002554664 cram 95.8 MB
EGAF00002554665 cram 136.1 MB
EGAF00002554666 cram 156.2 kB
EGAF00002554667 cram 85.1 MB
EGAF00002554668 cram 657.0 kB
EGAF00002554669 cram 79.7 MB
EGAF00002554670 cram 68.4 MB
EGAF00002554671 cram 100.1 MB
EGAF00002554672 cram 97.0 MB
EGAF00002554673 cram 73.4 MB
EGAF00002554674 cram 130.7 MB
EGAF00002554675 cram 74.2 MB
EGAF00002554676 cram 44.4 kB
EGAF00002554677 cram 113.0 MB
EGAF00002554678 cram 78.4 MB
EGAF00002554679 cram 59.2 MB
EGAF00002554680 cram 96.9 MB
EGAF00002554681 cram 86.7 MB
EGAF00002554682 cram 78.4 MB
EGAF00002554683 cram 94.4 MB
EGAF00002554684 cram 106.3 MB
EGAF00002554685 cram 84.3 MB
EGAF00002554686 cram 98.7 MB
EGAF00002554687 cram 58.9 MB
EGAF00002554688 cram 74.0 MB
EGAF00002554689 cram 59.4 MB
EGAF00002554690 cram 107.2 MB
EGAF00002554691 cram 67.8 MB
EGAF00002554692 cram 74.8 MB
EGAF00002554693 cram 65.7 MB
EGAF00002554694 cram 53.4 MB
EGAF00002554695 cram 62.1 MB
EGAF00002554696 cram 56.9 MB
EGAF00002554697 cram 111.2 MB
EGAF00002554698 cram 110.1 MB
EGAF00002554699 cram 80.7 MB
EGAF00002554700 cram 86.4 MB
EGAF00002554701 cram 90.5 MB
EGAF00002554702 cram 85.9 MB
EGAF00002554703 cram 110.7 MB
EGAF00002554704 cram 108.5 MB
EGAF00002554705 cram 116.5 MB
EGAF00002554706 cram 100.3 MB
EGAF00002554707 cram 62.2 MB
EGAF00002554708 cram 158.6 kB
EGAF00002554709 cram 76.1 MB
EGAF00002554710 cram 134.8 MB
EGAF00002554711 cram 109.6 MB
EGAF00002554712 cram 126.0 MB
EGAF00002554713 cram 128.2 MB
EGAF00002554714 cram 48.4 MB
EGAF00002554715 cram 65.4 MB
EGAF00002554716 cram 166.3 MB
EGAF00002554717 cram 101.1 MB
EGAF00002554718 cram 238.6 kB
EGAF00002554719 cram 71.2 MB
EGAF00002554720 cram 130.2 MB
EGAF00002554721 cram 108.1 MB
EGAF00002554722 cram 171.5 MB
EGAF00002554723 cram 109.2 MB
EGAF00002554724 cram 113.4 MB
EGAF00002554725 cram 93.4 MB
EGAF00002554726 cram 93.7 MB
EGAF00002554727 cram 96.7 MB
EGAF00002554728 cram 107.6 MB
EGAF00002554729 cram 115.7 MB
EGAF00002554730 cram 103.4 kB
EGAF00002554731 cram 114.5 MB
EGAF00002554732 cram 139.8 MB
EGAF00002554733 cram 130.2 MB
EGAF00002554734 cram 111.1 MB
EGAF00002554735 cram 88.8 MB
EGAF00002554736 cram 127.5 MB
EGAF00002554737 cram 104.3 MB
EGAF00002554738 cram 80.0 MB
EGAF00002554739 cram 67.1 MB
EGAF00002554740 cram 96.0 MB
EGAF00002554741 cram 115.1 MB
EGAF00002554742 cram 117.8 MB
EGAF00002554743 cram 111.6 MB
EGAF00002554744 cram 7.5 MB
EGAF00002554745 cram 78.2 MB
EGAF00002554746 cram 107.2 MB
EGAF00002554747 cram 113.6 MB
EGAF00002554748 cram 94.6 MB
EGAF00002554749 cram 117.3 MB
EGAF00002554750 cram 112.9 kB
EGAF00002554751 cram 95.8 MB
EGAF00002554752 cram 86.8 MB
EGAF00002554753 cram 68.2 MB
EGAF00002554754 cram 76.4 MB
EGAF00002554755 cram 78.2 MB
EGAF00002554756 cram 116.3 MB
EGAF00002554757 cram 131.0 MB
EGAF00002554758 cram 136.2 MB
EGAF00002554759 cram 164.8 MB
EGAF00002554760 cram 126.2 MB
EGAF00002554761 cram 164.5 MB
EGAF00002554762 cram 71.2 MB
EGAF00002554763 cram 82.2 MB
EGAF00002554764 cram 116.2 MB
EGAF00002554765 cram 72.7 kB
EGAF00002554766 cram 112.2 MB
EGAF00002554767 cram 108.9 MB
EGAF00002554768 cram 86.7 MB
EGAF00002554769 cram 113.2 MB
EGAF00002554770 cram 58.2 MB
EGAF00002554771 cram 65.2 MB
EGAF00002554772 cram 77.0 MB
EGAF00002554773 cram 85.0 MB
EGAF00002554774 cram 77.0 MB
EGAF00002554775 cram 81.9 MB
EGAF00002554776 cram 84.1 MB
EGAF00002554777 cram 108.1 MB
EGAF00002554778 cram 60.0 MB
EGAF00002554779 cram 79.5 MB
EGAF00002554780 cram 61.3 MB
EGAF00002554781 cram 86.0 MB
EGAF00002554782 cram 9.7 MB
EGAF00002554783 cram 169.5 MB
EGAF00002554784 cram 87.2 MB
EGAF00002554785 cram 86.3 MB
EGAF00002554786 cram 108.7 MB
EGAF00002554787 cram 139.2 MB
EGAF00002554788 cram 79.2 MB
EGAF00002554789 cram 44.3 MB
EGAF00002554790 cram 68.0 MB
EGAF00002554791 cram 91.5 MB
EGAF00002554792 cram 71.3 MB
EGAF00002554793 cram 104.6 MB
EGAF00002554794 cram 111.0 MB
EGAF00002554795 cram 101.7 MB
EGAF00002554796 cram 105.6 MB
EGAF00002554797 cram 110.5 MB
EGAF00002554798 cram 565.8 kB
EGAF00002554799 cram 5.4 MB
EGAF00002554800 cram 94.2 MB
EGAF00002554801 cram 186.8 MB
EGAF00002554802 cram 127.7 MB
EGAF00002554803 cram 105.9 MB
EGAF00002554804 cram 123.7 MB
EGAF00002554805 cram 118.3 MB
EGAF00002554806 cram 150.3 MB
EGAF00002554807 cram 109.2 MB
EGAF00002554808 cram 139.1 MB
EGAF00002554809 cram 111.3 MB
EGAF00002554810 cram 162.2 MB
EGAF00002554811 cram 132.9 MB
EGAF00002554812 cram 101.4 MB
EGAF00002554813 cram 134.6 MB
EGAF00002554814 cram 5.3 MB
EGAF00002554815 cram 376.2 kB
EGAF00002554816 cram 148.9 MB
EGAF00002554817 cram 127.1 MB
EGAF00002554818 cram 43.8 MB
EGAF00002554819 cram 62.4 MB
EGAF00002554820 cram 20.7 MB
EGAF00002554821 cram 65.0 MB
EGAF00002554822 cram 90.0 MB
EGAF00002554823 cram 86.5 MB
EGAF00002554824 cram 66.5 kB
EGAF00002554825 cram 82.3 MB
EGAF00002554826 cram 47.2 kB
EGAF00002554827 cram 80.1 MB
EGAF00002554828 cram 48.7 kB
EGAF00002554829 cram 84.0 MB
EGAF00002554830 cram 21.3 MB
EGAF00002554831 cram 42.0 MB
EGAF00002554832 cram 73.9 MB
EGAF00002554833 cram 112.0 MB
EGAF00002554834 cram 143.4 MB
EGAF00002554835 cram 67.4 MB
EGAF00002554836 cram 139.1 MB
EGAF00002554837 cram 105.1 MB
EGAF00002554838 cram 84.1 MB
EGAF00002554839 cram 82.8 MB
EGAF00002554840 cram 121.6 MB
EGAF00002554841 cram 115.3 MB
EGAF00002554842 cram 105.1 MB
EGAF00002554843 cram 69.2 MB
EGAF00002554844 cram 107.4 MB
EGAF00002554845 cram 71.5 MB
EGAF00002554846 cram 170.6 MB
EGAF00002554847 cram 133.9 MB
EGAF00002554848 cram 98.1 MB
EGAF00002554849 cram 91.9 MB
EGAF00002554850 cram 47.3 MB
EGAF00002554851 cram 116.5 MB
EGAF00002554852 cram 135.3 MB
EGAF00002554853 cram 153.8 MB
EGAF00002554854 cram 81.9 MB
EGAF00002554855 cram 141.5 MB
EGAF00002554856 cram 73.9 MB
EGAF00002554857 cram 93.3 MB
EGAF00002554858 cram 145.6 MB
EGAF00002554859 cram 141.8 MB
EGAF00002554860 cram 53.6 MB
EGAF00002554861 cram 73.0 MB
EGAF00002554862 cram 70.0 MB
EGAF00002554863 cram 64.9 MB
EGAF00002554864 cram 99.6 MB
EGAF00002554865 cram 77.5 MB
EGAF00002554866 cram 96.8 MB
EGAF00002554867 cram 89.5 MB
EGAF00002554868 cram 118.1 MB
EGAF00002554869 cram 140.8 MB
EGAF00002554870 cram 78.1 MB
EGAF00002554871 cram 70.2 MB
EGAF00002554872 cram 98.5 MB
EGAF00002554873 cram 129.6 MB
EGAF00002554874 cram 119.5 MB
EGAF00002554875 cram 131.3 MB
EGAF00002554876 cram 151.6 MB
EGAF00002554877 cram 137.3 MB
EGAF00002554878 cram 78.7 MB
EGAF00002554879 cram 63.6 MB
EGAF00002554880 cram 68.8 MB
EGAF00002554881 cram 67.1 MB
EGAF00002554882 cram 75.7 MB
EGAF00002554883 cram 89.5 MB
EGAF00002554884 cram 78.0 MB
EGAF00002554885 cram 73.0 MB
EGAF00002554886 cram 112.1 MB
EGAF00002554887 cram 106.7 MB
EGAF00002554888 cram 92.4 MB
EGAF00002554889 cram 103.4 MB
EGAF00002554890 cram 140.3 MB
EGAF00002554891 cram 151.5 MB
EGAF00002554892 cram 52.2 MB
EGAF00002554893 cram 71.8 MB
EGAF00002554894 cram 36.5 MB
EGAF00002554895 cram 127.4 MB
EGAF00002554896 cram 71.7 MB
EGAF00002554897 cram 104.5 MB
EGAF00002554898 cram 100.7 MB
EGAF00002554899 cram 120.7 MB
EGAF00002554900 cram 133.2 MB
EGAF00002554901 cram 140.4 MB
EGAF00002554902 cram 71.5 MB
EGAF00002554903 cram 51.2 MB
EGAF00002554904 cram 75.3 MB
EGAF00002554905 cram 87.1 MB
EGAF00002554906 cram 145.4 MB
EGAF00002554907 cram 135.5 MB
EGAF00002554908 cram 119.3 MB
EGAF00002554909 cram 113.0 MB
EGAF00002554910 cram 227.5 kB
EGAF00002554911 cram 110.7 MB
EGAF00002554912 cram 93.9 MB
EGAF00002554913 cram 128.8 MB
EGAF00002554914 cram 99.8 MB
EGAF00002554915 cram 84.8 MB
EGAF00002554916 cram 109.9 MB
EGAF00002554917 cram 149.1 MB
EGAF00002554918 cram 64.5 MB
EGAF00002554919 cram 78.0 MB
EGAF00002554920 cram 116.8 MB
EGAF00002554921 cram 144.8 MB
EGAF00002554922 cram 92.4 MB
EGAF00002554923 cram 140.4 MB
EGAF00002554924 cram 109.2 MB
EGAF00002554925 cram 150.5 MB
EGAF00002554926 cram 61.4 MB
EGAF00002554927 cram 61.1 MB
EGAF00002554928 cram 73.9 MB
EGAF00002554929 cram 90.6 MB
EGAF00002554930 cram 67.3 MB
EGAF00002554931 cram 93.9 MB
EGAF00002554932 cram 89.1 MB
EGAF00002554933 cram 77.4 MB
EGAF00002554934 cram 76.4 MB
EGAF00002554935 cram 69.5 MB
EGAF00002554936 cram 62.3 MB
EGAF00002554937 cram 85.5 MB
EGAF00002554938 cram 114.6 MB
EGAF00002554939 cram 139.3 MB
EGAF00002554940 cram 108.4 MB
EGAF00002554941 cram 124.3 MB
EGAF00002554942 cram 83.2 MB
EGAF00002554943 cram 40.7 MB
EGAF00002554944 cram 96.1 MB
EGAF00002554945 cram 95.1 MB
EGAF00002554946 cram 169.8 MB
EGAF00002554947 cram 127.1 MB
EGAF00002554948 cram 76.5 MB
EGAF00002554949 cram 68.8 MB
EGAF00002554950 cram 128.0 MB
EGAF00002554951 cram 129.2 MB
384 Files (36.3 GB)