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Dataset

Collection of Genotypic and Ethnographic Information from Individuals of South African Ethnic Groups

Dataset ID	Technology	Samples
EGAD00001006198	N/A	84

Dataset Description

Whole genome sequencing data of 84 Nama individuals with KhoeSan ancestry from southern Africa in phased VCF format. Variants were called/phased as part of the African Genome Resource. The data has been aligned to GRCh37.

Data Use Conditions

POA RS RUO NPU COL IRB US PS IS

See further information on Data Use Conditions

Label	Code	Version
population origins or ancestry research only	DUO:0000011	2019-01-07
research specific restrictions	DUO:0000012	2019-01-07
obsolete research use only	DUO:0000014	2019-01-07
not for profit, non commercial use only	DUO:0000018	2019-01-07
collaboration required	DUO:0000020	2019-01-07
ethics approval required	DUO:0000021	2019-01-07
user specific restriction	DUO:0000026	2019-01-07
project specific restriction	DUO:0000027	2019-01-07
institution specific restriction	DUO:0000028	2019-01-07

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

South African Ethnographic study data access committee
Contact person: Marlo Moller
Email: marlom [at] sun [dot] ac [dot] za
More details: EGAC00001001613

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This dataset is featured in 1 study

Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID	Study Title	Study Type
EGAS00001004472	Collection of Genotypic and Ethnographic Information from Individuals of South African Ethnic Groups	Other

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