About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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PSC-IBD-CRC

Formalin-fixed, paraffin-embedded samples from 19 PSC-IBD-CRCs, 15 adjacent (non-tumour) mucosa samples and 18 non-mucosal DNA samples were collected via the nationwide network and registry of histo- and cytopathology in the Netherlands (PALGA). DNA was extracted for molecular analysis.

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Data Access Policy of NKI-AvL TGO

Data Access Policy of NKI-AvL TGO To request access to this specific dataset, and in order to comply with local and (inter)national regulations, please follow the steps described below: 1. Please fill in the information requested on the website: ega.nki.nl 2. Once you’ve submitted this information, the Data Access Committee (DAC) and the NKI-AVL Internal Review Board (IRB) will review your planned study and its goals and judge whether it is competing with our interests. The DAC and IRB can approve or decline your request or request a modification. 3. Upon approval by the IRB, you will receive a Data Transfer Agreement (DTA) that needs to be filled in and signed by the legal representative of your institute / company. 4. Upon acceptance of a signed DTA by our Knowledge Transfer & Contracting Office (KT&C), your party will receive a copy signed by our legal representative, and you will need to submit your access request via the EGA website

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004497 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00004149631 fastq.gz 191.2 MB Report
EGAF00004149632 fastq.gz 183.0 MB Report
EGAF00004149633 fastq.gz 189.7 MB Report
EGAF00004149634 fastq.gz 183.4 MB Report
EGAF00004149635 fastq.gz 181.5 MB Report
EGAF00004149636 fastq.gz 232.2 MB Report
EGAF00004149637 fastq.gz 189.8 MB Report
EGAF00004149638 fastq.gz 183.6 MB Report
EGAF00004149639 fastq.gz 188.6 MB Report
EGAF00004149640 fastq.gz 220.9 MB Report
EGAF00004149641 fastq.gz 199.8 MB Report
EGAF00004149642 fastq.gz 193.5 MB Report
EGAF00004149643 fastq.gz 194.9 MB Report
EGAF00004149644 fastq.gz 182.8 MB Report
EGAF00004149645 fastq.gz 175.4 MB Report
EGAF00004149646 fastq.gz 226.0 MB Report
EGAF00004149647 fastq.gz 301.9 MB Report
EGAF00004149648 fastq.gz 406.7 MB Report
EGAF00004149649 fastq.gz 252.0 MB Report
EGAF00004149650 fastq.gz 223.7 MB Report
EGAF00004149651 fastq.gz 233.4 MB Report
EGAF00004149652 fastq.gz 308.9 MB Report
EGAF00004149653 fastq.gz 341.2 MB Report
EGAF00004149654 fastq.gz 546.8 MB Report
EGAF00004149655 fastq.gz 274.9 MB Report
EGAF00004149656 fastq.gz 294.6 MB Report
EGAF00004149657 fastq.gz 585.6 MB Report
EGAF00004149658 fastq.gz 386.4 MB Report
EGAF00004149659 fastq.gz 417.3 MB Report
EGAF00004149660 fastq.gz 290.6 MB Report
EGAF00004149661 fastq.gz 254.6 MB Report
EGAF00004149662 fastq.gz 301.1 MB Report
EGAF00004149663 fastq.gz 353.0 MB Report
EGAF00004149664 fastq.gz 442.1 MB Report
EGAF00004149665 fastq.gz 287.4 MB Report
EGAF00004149666 fastq.gz 379.3 MB Report
EGAF00004149667 fastq.gz 315.8 MB Report
EGAF00004149668 fastq.gz 364.0 MB Report
EGAF00004149669 fastq.gz 274.0 MB Report
EGAF00004149670 fastq.gz 217.8 MB Report
EGAF00004149671 fastq.gz 284.3 MB Report
EGAF00004149672 fastq.gz 282.5 MB Report
EGAF00004149673 fastq.gz 504.0 MB Report
EGAF00004149674 fastq.gz 217.8 MB Report
EGAF00004149675 fastq.gz 246.0 MB Report
EGAF00004149676 fastq.gz 256.1 MB Report
EGAF00004149677 fastq.gz 213.0 MB Report
EGAF00004149678 fastq.gz 209.4 MB Report
EGAF00004149679 fastq.gz 246.5 MB Report
EGAF00004149680 fastq.gz 207.8 MB Report
EGAF00004149681 fastq.gz 165.2 MB Report
EGAF00004149682 fastq.gz 246.7 MB Report
EGAF00004149683 bam 56.8 MB Report
EGAF00004149684 bam 58.8 MB Report
EGAF00004149685 bam 62.0 MB Report
EGAF00004149686 bam 95.2 MB Report
EGAF00004149687 bam 87.5 MB Report
EGAF00004149688 bam 71.0 MB Report
EGAF00004149689 bam 99.0 MB Report
EGAF00004149690 bam 50.1 MB Report
EGAF00004149691 bam 44.0 MB Report
EGAF00004149692 bam 42.4 MB Report
EGAF00004149693 bam 60.7 MB Report
EGAF00004149694 bam 62.7 MB Report
EGAF00004149695 bam 44.4 MB Report
EGAF00004149696 bam 55.3 MB Report
EGAF00004149697 bam 38.5 MB Report
EGAF00004149698 bam 34.3 MB Report
EGAF00004149699 bam 28.7 MB Report
EGAF00004149700 bam 59.4 MB Report
EGAF00004149701 bam 51.8 MB Report
EGAF00004149702 bam 64.5 MB Report
EGAF00004149703 bam 40.9 MB Report
EGAF00004149704 bam 34.7 MB Report
EGAF00004149705 bam 24.1 MB Report
EGAF00004149706 bam 22.4 MB Report
EGAF00004149707 bam 34.1 MB Report
EGAF00004149708 bam 31.8 MB Report
EGAF00004149709 bam 45.1 MB Report
EGAF00004149710 bam 38.0 MB Report
EGAF00004149711 bam 66.8 MB Report
EGAF00004149712 bam 65.2 MB Report
EGAF00004149713 bam 41.0 MB Report
EGAF00004149714 bam 42.9 MB Report
EGAF00004149715 bam 35.1 MB Report
EGAF00004149716 bam 87.2 MB Report
EGAF00004149717 bam 97.3 MB Report
EGAF00004149718 bam 112.8 MB Report
EGAF00004149719 bam 75.3 MB Report
EGAF00004149720 bam 46.4 MB Report
EGAF00004149721 bam 63.9 MB Report
EGAF00004149722 bam 58.3 MB Report
EGAF00004149723 bam 66.8 MB Report
EGAF00004149724 bam 67.9 MB Report
EGAF00004149725 bam 82.3 MB Report
EGAF00004149726 bam 66.9 MB Report
EGAF00004149727 bam 62.4 MB Report
EGAF00004149728 bam 57.0 MB Report
EGAF00004149729 bam 60.8 MB Report
99 Files (16.9 GB)