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PSC-IBD-CRC

Formalin-fixed, paraffin-embedded samples from 19 PSC-IBD-CRCs, 15 adjacent (non-tumour) mucosa samples and 18 non-mucosal DNA samples were collected via the nationwide network and registry of histo- and cytopathology in the Netherlands (PALGA). DNA was extracted for molecular analysis.

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Data Access Policy of NKI-AvL TGO

Data Access Policy of NKI-AvL TGO To request access to this specific dataset, and in order to comply with local and (inter)national regulations, please follow the steps described below: 1. Please fill in the information requested on the website: ega.nki.nl 2. Once you’ve submitted this information, the Data Access Committee (DAC) and the NKI-AVL Internal Review Board (IRB) will review your planned study and its goals and judge whether it is competing with our interests. The DAC and IRB can approve or decline your request or request a modification. 3. Upon approval by the IRB, you will receive a Data Transfer Agreement (DTA) that needs to be filled in and signed by the legal representative of your institute / company. 4. Upon acceptance of a signed DTA by our Knowledge Transfer & Contracting Office (KT&C), your party will receive a copy signed by our legal representative, and you will need to submit your access request via the EGA website

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004497 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00004149631 fastq.gz 191.2 MB
EGAF00004149632 fastq.gz 183.0 MB
EGAF00004149633 fastq.gz 189.7 MB
EGAF00004149634 fastq.gz 183.4 MB
EGAF00004149635 fastq.gz 181.5 MB
EGAF00004149636 fastq.gz 232.2 MB
EGAF00004149637 fastq.gz 189.8 MB
EGAF00004149638 fastq.gz 183.6 MB
EGAF00004149639 fastq.gz 188.6 MB
EGAF00004149640 fastq.gz 220.9 MB
EGAF00004149641 fastq.gz 199.8 MB
EGAF00004149642 fastq.gz 193.5 MB
EGAF00004149643 fastq.gz 194.9 MB
EGAF00004149644 fastq.gz 182.8 MB
EGAF00004149645 fastq.gz 175.4 MB
EGAF00004149646 fastq.gz 226.0 MB
EGAF00004149647 fastq.gz 301.9 MB
EGAF00004149648 fastq.gz 406.7 MB
EGAF00004149649 fastq.gz 252.0 MB
EGAF00004149650 fastq.gz 223.7 MB
EGAF00004149651 fastq.gz 233.4 MB
EGAF00004149652 fastq.gz 308.9 MB
EGAF00004149653 fastq.gz 341.2 MB
EGAF00004149654 fastq.gz 546.8 MB
EGAF00004149655 fastq.gz 274.9 MB
EGAF00004149656 fastq.gz 294.6 MB
EGAF00004149657 fastq.gz 585.6 MB
EGAF00004149658 fastq.gz 386.4 MB
EGAF00004149659 fastq.gz 417.3 MB
EGAF00004149660 fastq.gz 290.6 MB
EGAF00004149661 fastq.gz 254.6 MB
EGAF00004149662 fastq.gz 301.1 MB
EGAF00004149663 fastq.gz 353.0 MB
EGAF00004149664 fastq.gz 442.1 MB
EGAF00004149665 fastq.gz 287.4 MB
EGAF00004149666 fastq.gz 379.3 MB
EGAF00004149667 fastq.gz 315.8 MB
EGAF00004149668 fastq.gz 364.0 MB
EGAF00004149669 fastq.gz 274.0 MB
EGAF00004149670 fastq.gz 217.8 MB
EGAF00004149671 fastq.gz 284.3 MB
EGAF00004149672 fastq.gz 282.5 MB
EGAF00004149673 fastq.gz 504.0 MB
EGAF00004149674 fastq.gz 217.8 MB
EGAF00004149675 fastq.gz 246.0 MB
EGAF00004149676 fastq.gz 256.1 MB
EGAF00004149677 fastq.gz 213.0 MB
EGAF00004149678 fastq.gz 209.4 MB
EGAF00004149679 fastq.gz 246.5 MB
EGAF00004149680 fastq.gz 207.8 MB
EGAF00004149681 fastq.gz 165.2 MB
EGAF00004149682 fastq.gz 246.7 MB
EGAF00004149683 bam 56.8 MB
EGAF00004149684 bam 58.8 MB
EGAF00004149685 bam 62.0 MB
EGAF00004149686 bam 95.2 MB
EGAF00004149687 bam 87.5 MB
EGAF00004149688 bam 71.0 MB
EGAF00004149689 bam 99.0 MB
EGAF00004149690 bam 50.1 MB
EGAF00004149691 bam 44.0 MB
EGAF00004149692 bam 42.4 MB
EGAF00004149693 bam 60.7 MB
EGAF00004149694 bam 62.7 MB
EGAF00004149695 bam 44.4 MB
EGAF00004149696 bam 55.3 MB
EGAF00004149697 bam 38.5 MB
EGAF00004149698 bam 34.3 MB
EGAF00004149699 bam 28.7 MB
EGAF00004149700 bam 59.4 MB
EGAF00004149701 bam 51.8 MB
EGAF00004149702 bam 64.5 MB
EGAF00004149703 bam 40.9 MB
EGAF00004149704 bam 34.7 MB
EGAF00004149705 bam 24.1 MB
EGAF00004149706 bam 22.4 MB
EGAF00004149707 bam 34.1 MB
EGAF00004149708 bam 31.8 MB
EGAF00004149709 bam 45.1 MB
EGAF00004149710 bam 38.0 MB
EGAF00004149711 bam 66.8 MB
EGAF00004149712 bam 65.2 MB
EGAF00004149713 bam 41.0 MB
EGAF00004149714 bam 42.9 MB
EGAF00004149715 bam 35.1 MB
EGAF00004149716 bam 87.2 MB
EGAF00004149717 bam 97.3 MB
EGAF00004149718 bam 112.8 MB
EGAF00004149719 bam 75.3 MB
EGAF00004149720 bam 46.4 MB
EGAF00004149721 bam 63.9 MB
EGAF00004149722 bam 58.3 MB
EGAF00004149723 bam 66.8 MB
EGAF00004149724 bam 67.9 MB
EGAF00004149725 bam 82.3 MB
EGAF00004149726 bam 66.9 MB
EGAF00004149727 bam 62.4 MB
EGAF00004149728 bam 57.0 MB
EGAF00004149729 bam 60.8 MB
99 Files (16.9 GB)