About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Therapeutic vulnerabilities in the DNA damage response for the treatment of ATRX mutant neuroblastoma

Whole genome sequencing data of isogenic ATRX/TP53 knockout clones of the neuroblastoma cell line SK-N-SH

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DUO:0000006
version: 2019-01-07

health or medical or biomedical research

This data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.

DUO:0000018
version: 2019-01-07

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000026
version: 2019-01-07

user specific restriction

This data use modifier indicates that use is limited to use by approved users.

Neuroblastoma cell line experimental data

“I undertake to use the sequencing data exclusively for academic research purposes. The research activities comprise examinations of molecular, genetic, immunologic and other characteristics of the tumor disease, as well as the development of new therapeutic options or diagnostic methods where appropriate. I received professional legal advice or a positive vote by the ethic committee, respectively. All applicable data protection laws are respected. Genetic data will be encoded and stored separately from clinical data. I ensure that these data at our institution are protected against access by any third parties. The data will not be passed on to unauthorized third parties. Equally, the codes necessary for re-identification will not be passed on to unauthorized third parties. No attempt is made to identify the respective patient via their genetic data. Future publications will not allow any conclusion regarding the person’s identity.”

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004550 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00004177058 fastq.gz 41.5 GB Report
EGAF00004177059 fastq.gz 46.8 GB Report
EGAF00004177060 fastq.gz 41.2 GB Report
EGAF00004177061 fastq.gz 46.7 GB Report
EGAF00004177062 fastq.gz 40.2 GB Report
EGAF00004177063 fastq.gz 45.8 GB Report
EGAF00004177064 fastq.gz 40.1 GB Report
EGAF00004177065 fastq.gz 45.5 GB Report
EGAF00004177066 fastq.gz 41.0 GB Report
EGAF00004177067 fastq.gz 44.7 GB Report
EGAF00004177068 fastq.gz 41.5 GB Report
EGAF00004177069 fastq.gz 46.9 GB Report
EGAF00004177070 fastq.gz 40.1 GB Report
EGAF00004177071 fastq.gz 45.8 GB Report
EGAF00004177072 fastq.gz 41.7 GB Report
EGAF00004177073 fastq.gz 47.4 GB Report
EGAF00004177074 fastq.gz 39.8 GB Report
EGAF00004177075 fastq.gz 42.8 GB Report
EGAF00004177076 fastq.gz 40.6 GB Report
EGAF00004177077 fastq.gz 43.9 GB Report
20 Files (863.9 GB)