About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Primary tumor/metastatic/germline DNA trios equences files

Exome sequences of primary tumor/metastatic/germline DNA trios. Tumoral and germline samples were sequenced to an expected depth of respectively 150M and 50M reads in order to obtain differential depth (>100X versus >30X). Submitted data are paired-end fastq files.

Request Access

Policy to access fastq files of matched primary tumor and metastatic breast cancer samples and associated germline samples.

* Conditions of use of the data The applicants undertake to respect all the following measures and to have them respected by their staff as well as any other person(s) assisting them with the use of the data: - To collect only data adequate, relevant, limited and strictly necessary to the specific treatment that it with these data; - Do not use the data to which they can access for purposes other than those indicated in the application request; - Disclose this data only to persons duly authorized by reason of their duties and who have been indicated in the data access request file; - Do not make any copy of this data except that it is necessary for the execution of their research; - Take all necessary measures to avoid misuse or fraudulent use of this data; - Ensure that only secure means of communication will be used to transfer this data; - At the end of the research project, to fully restore the data, computer files and any information related to these data. When this task falls within its remit, the applicants undertake to ensure that the persons from whom they collect and / or use the data have been previously informed of the specific treatment that they are carrying out with their data. * Data destruction At the end of the search, the applicants undertake, after having made sure of the terms relating to reversibility: - Destroy all data - Return all data to the DAC - Return the data to the subcontractor designated by the DAC The return must be accompanied by the destruction of all data (including copies) in the information systems of the applicant and their collaborators.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004578 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00004187921 fastq.gz 3.5 GB Report
EGAF00004187922 fastq.gz 3.6 GB Report
EGAF00004187923 fastq.gz 1.9 GB Report
EGAF00004187924 fastq.gz 1.9 GB Report
EGAF00004187925 fastq.gz 6.9 GB Report
EGAF00004187926 fastq.gz 7.0 GB Report
EGAF00004187927 fastq.gz 6.8 GB Report
EGAF00004187928 fastq.gz 6.8 GB Report
EGAF00004187929 fastq.gz 2.2 GB Report
EGAF00004187930 fastq.gz 2.3 GB Report
EGAF00004187931 fastq.gz 5.6 GB Report
EGAF00004187932 fastq.gz 5.7 GB Report
EGAF00004187933 fastq.gz 7.4 GB Report
EGAF00004187934 fastq.gz 7.4 GB Report
EGAF00004187935 fastq.gz 2.1 GB Report
EGAF00004187936 fastq.gz 2.1 GB Report
EGAF00004187937 fastq.gz 6.8 GB Report
EGAF00004187938 fastq.gz 6.9 GB Report
EGAF00004187939 fastq.gz 6.8 GB Report
EGAF00004187940 fastq.gz 6.9 GB Report
EGAF00004187941 fastq.gz 2.6 GB Report
EGAF00004187942 fastq.gz 2.7 GB Report
EGAF00004187943 fastq.gz 7.0 GB Report
EGAF00004187944 fastq.gz 7.0 GB Report
EGAF00004187945 fastq.gz 7.9 GB Report
EGAF00004187946 fastq.gz 7.9 GB Report
EGAF00004187947 fastq.gz 2.3 GB Report
EGAF00004187948 fastq.gz 2.3 GB Report
EGAF00004187949 fastq.gz 7.7 GB Report
EGAF00004187950 fastq.gz 7.8 GB Report
EGAF00004187951 fastq.gz 10.1 GB Report
EGAF00004187952 fastq.gz 10.2 GB Report
EGAF00004187953 fastq.gz 2.3 GB Report
EGAF00004187954 fastq.gz 2.3 GB Report
EGAF00004187955 fastq.gz 5.7 GB Report
EGAF00004187956 fastq.gz 5.8 GB Report
EGAF00004187957 fastq.gz 5.5 GB Report
EGAF00004187958 fastq.gz 5.5 GB Report
EGAF00004187959 fastq.gz 1.5 GB Report
EGAF00004187960 fastq.gz 1.5 GB Report
EGAF00004187961 fastq.gz 5.3 GB Report
EGAF00004187962 fastq.gz 5.3 GB Report
EGAF00004187963 fastq.gz 6.5 GB Report
EGAF00004187964 fastq.gz 6.5 GB Report
EGAF00004187965 fastq.gz 1.5 GB Report
EGAF00004187966 fastq.gz 1.5 GB Report
EGAF00004187967 fastq.gz 5.1 GB Report
EGAF00004187968 fastq.gz 5.1 GB Report
EGAF00004187969 fastq.gz 4.7 GB Report
EGAF00004187970 fastq.gz 4.8 GB Report
EGAF00004187971 fastq.gz 2.0 GB Report
EGAF00004187972 fastq.gz 2.1 GB Report
EGAF00004187973 fastq.gz 4.8 GB Report
EGAF00004187974 fastq.gz 4.8 GB Report
EGAF00004187975 fastq.gz 6.7 GB Report
EGAF00004187976 fastq.gz 6.7 GB Report
EGAF00004187977 fastq.gz 2.1 GB Report
EGAF00004187978 fastq.gz 2.1 GB Report
EGAF00004187979 fastq.gz 5.6 GB Report
EGAF00004187980 fastq.gz 5.6 GB Report
EGAF00004187981 fastq.gz 5.6 GB Report
EGAF00004187982 fastq.gz 5.6 GB Report
EGAF00004187983 fastq.gz 1.8 GB Report
EGAF00004187984 fastq.gz 1.8 GB Report
EGAF00004187985 fastq.gz 5.6 GB Report
EGAF00004187986 fastq.gz 5.7 GB Report
EGAF00004187987 fastq.gz 4.7 GB Report
EGAF00004187988 fastq.gz 4.7 GB Report
EGAF00004187989 fastq.gz 1.9 GB Report
EGAF00004187990 fastq.gz 1.9 GB Report
EGAF00004187991 fastq.gz 5.5 GB Report
EGAF00004187992 fastq.gz 5.5 GB Report
EGAF00004187993 fastq.gz 5.9 GB Report
EGAF00004187994 fastq.gz 5.9 GB Report
EGAF00004187995 fastq.gz 1.8 GB Report
EGAF00004187996 fastq.gz 1.8 GB Report
EGAF00004187997 fastq.gz 5.6 GB Report
EGAF00004187998 fastq.gz 5.6 GB Report
EGAF00004187999 fastq.gz 5.5 GB Report
EGAF00004188000 fastq.gz 5.5 GB Report
EGAF00004188001 fastq.gz 2.2 GB Report
EGAF00004188002 fastq.gz 2.2 GB Report
EGAF00004188003 fastq.gz 7.7 GB Report
EGAF00004188004 fastq.gz 7.8 GB Report
EGAF00004188005 fastq.gz 5.5 GB Report
EGAF00004188006 fastq.gz 5.6 GB Report
EGAF00004188007 fastq.gz 1.8 GB Report
EGAF00004188008 fastq.gz 1.8 GB Report
EGAF00004188009 fastq.gz 6.7 GB Report
EGAF00004188010 fastq.gz 6.8 GB Report
EGAF00004188011 fastq.gz 5.3 GB Report
EGAF00004188012 fastq.gz 5.4 GB Report
EGAF00004188013 fastq.gz 1.6 GB Report
EGAF00004188014 fastq.gz 1.7 GB Report
EGAF00004188015 fastq.gz 5.2 GB Report
EGAF00004188016 fastq.gz 5.3 GB Report
EGAF00004188017 fastq.gz 4.9 GB Report
EGAF00004188018 fastq.gz 5.0 GB Report
EGAF00004188019 fastq.gz 1.7 GB Report
EGAF00004188020 fastq.gz 1.7 GB Report
EGAF00004188021 fastq.gz 4.6 GB Report
EGAF00004188022 fastq.gz 4.6 GB Report
EGAF00004188023 fastq.gz 5.1 GB Report
EGAF00004188024 fastq.gz 5.2 GB Report
EGAF00004188025 fastq.gz 1.6 GB Report
EGAF00004188026 fastq.gz 1.7 GB Report
EGAF00004188027 fastq.gz 5.8 GB Report
EGAF00004188028 fastq.gz 5.8 GB Report
EGAF00004188029 fastq.gz 6.4 GB Report
EGAF00004188030 fastq.gz 6.4 GB Report
EGAF00004188031 fastq.gz 1.5 GB Report
EGAF00004188032 fastq.gz 1.5 GB Report
EGAF00004188033 fastq.gz 4.9 GB Report
EGAF00004188034 fastq.gz 4.9 GB Report
EGAF00004188035 fastq.gz 6.2 GB Report
EGAF00004188036 fastq.gz 6.3 GB Report
EGAF00004188037 fastq.gz 1.7 GB Report
EGAF00004188038 fastq.gz 1.7 GB Report
EGAF00004188039 fastq.gz 6.1 GB Report
EGAF00004188040 fastq.gz 6.2 GB Report
EGAF00004188041 fastq.gz 6.6 GB Report
EGAF00004188042 fastq.gz 6.7 GB Report
EGAF00004188043 fastq.gz 1.9 GB Report
EGAF00004188044 fastq.gz 1.9 GB Report
EGAF00004188045 fastq.gz 6.5 GB Report
EGAF00004188046 fastq.gz 6.6 GB Report
EGAF00004188047 fastq.gz 7.2 GB Report
EGAF00004188048 fastq.gz 7.3 GB Report
EGAF00004188049 fastq.gz 3.3 GB Report
EGAF00004188050 fastq.gz 3.3 GB Report
EGAF00004188051 fastq.gz 6.7 GB Report
EGAF00004188052 fastq.gz 6.8 GB Report
EGAF00004188053 fastq.gz 5.5 GB Report
EGAF00004188054 fastq.gz 5.6 GB Report
EGAF00004188055 fastq.gz 1.3 GB Report
EGAF00004188056 fastq.gz 1.3 GB Report
EGAF00004188057 fastq.gz 4.1 GB Report
EGAF00004188058 fastq.gz 4.1 GB Report
EGAF00004188059 fastq.gz 3.1 GB Report
EGAF00004188060 fastq.gz 3.2 GB Report
EGAF00004188061 fastq.gz 3.9 GB Report
EGAF00004188062 fastq.gz 3.9 GB Report
EGAF00004188063 fastq.gz 6.7 GB Report
EGAF00004188064 fastq.gz 6.8 GB Report
EGAF00004188065 fastq.gz 11.8 GB Report
EGAF00004188066 fastq.gz 12.0 GB Report
EGAF00004188067 fastq.gz 1.4 GB Report
EGAF00004188068 fastq.gz 1.4 GB Report
EGAF00004188069 fastq.gz 4.3 GB Report
EGAF00004188070 fastq.gz 4.4 GB Report
EGAF00004188071 fastq.gz 1.7 GB Report
EGAF00004188072 fastq.gz 1.8 GB Report
EGAF00004188073 fastq.gz 563.1 MB Report
EGAF00004188074 fastq.gz 568.4 MB Report
EGAF00004188075 fastq.gz 6.7 GB Report
EGAF00004188076 fastq.gz 6.8 GB Report
EGAF00004188077 fastq.gz 8.2 GB Report
EGAF00004188078 fastq.gz 8.3 GB Report
EGAF00004188079 fastq.gz 3.5 GB Report
EGAF00004188080 fastq.gz 3.6 GB Report
EGAF00004188081 fastq.gz 9.8 GB Report
EGAF00004188082 fastq.gz 10.0 GB Report
162 Files (768.1 GB)