Reference single cell SNP array dataset from Coriell for training and validation of method for accurate single cell genotyping
This dataset contains DNA from B-lymphocytes from 2 Coriell families and 4 individuals hybridized to HumanKaryomap BeadChip Array. Single cells from subjects GM12878 and GM7228 were amplified using multiple displacement amplification (SureMDA) according to Infium Karyomapping Assay Guide. Bulk DNA was processed and hybridized to an array for subject GM12878, GM07224 and GM07225.
- 4 samples
- DAC: EGAC00001001713
- GRU-CC DUO:0000005 (version: 2019-01-07)general research use and clinical careThis data use limitation indicates that use is allowed for health/medical/biomedical purposes and other biological research, including the study of population origins or ancestry.
- RU DUO:0000014 (version: 2019-01-07)research use onlyThis data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).
Access to data is subject to agreement with the Coriell Institute and requires approval from the NIGMS repository.
Access to data requires approval from the DAC, and from the NIGMS repository. Approval is only given after the following declarations have been reviewed by, and accepted by, the NIGMS: 1) a NIGMS statement of research intent (SORI) from the principal investigator that the order was placed for 2) a NIGMS SORI form from the collaborating group's PI 3) a NIGMS MTA from the collaborating group's PI Please note that all SORI forms should confirm that all investigators are collaborating on a single research project.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001004621 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00004460318 | vcf | 260.7 MB | ||
| 1 File (260.7 MB) | ||||