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FIT interval CRCs versus Screen-detected CRCs

Formalin-fixed, paraffin-embedded samples from 27 FIT interval CRC and 54 screen-detected CRCs collected in a pilot-program of FIT-based CRC screening in the southwest and northwest regions in the Netherlands, were used in this study. DNA was extracted for 1) Shallow Sequencing (copy number analysis) and 2) TSACP Amplicon Cancer Gene Panel (mutations) of 22 FIT Interval CRCs and 45 screen-detected CRCs.

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Data Access Policy of NKI-AvL TGO To request access to this specific dataset, and in order to comply with local and (inter)national regulations, please follow the steps described below: 1. Please fill in the information requested on the website: ega.nki.nl 2. Once you’ve submitted this information, the Data Access Committee (DAC) and the NKI-AVL Internal Review Board (IRB) will review your planned study and its goals and judge whether it is competing with our interests. The DAC and IRB can approve or decline your request or request a modification. 3. Upon approval by the IRB, you will receive a Data Transfer Agreement (DTA) that needs to be filled in and signed by the legal representative of your institute / company. 4. Upon acceptance of a signed DTA by our Knowledge Transfer & Contracting Office (KT&C), your party will receive a copy signed by our legal representative, and you will need to submit your access request via the EGA website

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004683 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00004679299 fastq.gz 396.3 MB
EGAF00004679300 fastq.gz 403.7 MB
EGAF00004679301 fastq.gz 346.5 MB
EGAF00004679302 fastq.gz 409.3 MB
EGAF00004679303 fastq.gz 305.6 MB
EGAF00004679304 fastq.gz 370.5 MB
EGAF00004679305 fastq.gz 419.9 MB
EGAF00004679306 fastq.gz 458.1 MB
EGAF00004679307 fastq.gz 482.0 MB
EGAF00004679308 fastq.gz 384.1 MB
EGAF00004679309 fastq.gz 313.2 MB
EGAF00004679310 fastq.gz 355.8 MB
EGAF00004679311 fastq.gz 351.6 MB
EGAF00004679312 fastq.gz 361.7 MB
EGAF00004679313 fastq.gz 327.3 MB
EGAF00004679314 fastq.gz 403.8 MB
EGAF00004679315 fastq.gz 417.0 MB
EGAF00004679316 fastq.gz 312.5 MB
EGAF00004679317 fastq.gz 356.0 MB
EGAF00004679318 fastq.gz 374.5 MB
EGAF00004679319 fastq.gz 336.0 MB
EGAF00004679320 fastq.gz 227.6 MB
EGAF00004679321 fastq.gz 295.1 MB
EGAF00004679322 fastq.gz 315.7 MB
EGAF00004679323 fastq.gz 326.9 MB
EGAF00004679324 fastq.gz 336.9 MB
EGAF00004679325 fastq.gz 295.2 MB
EGAF00004679326 fastq.gz 309.7 MB
EGAF00004679327 fastq.gz 426.5 MB
EGAF00004679328 fastq.gz 440.9 MB
EGAF00004679329 fastq.gz 407.6 MB
EGAF00004679330 fastq.gz 375.0 MB
EGAF00004679331 fastq.gz 385.6 MB
EGAF00004679332 fastq.gz 392.3 MB
EGAF00004679333 fastq.gz 333.4 MB
EGAF00004679334 fastq.gz 358.3 MB
EGAF00004679335 fastq.gz 274.0 MB
EGAF00004679336 fastq.gz 245.2 MB
EGAF00004679337 fastq.gz 445.2 MB
EGAF00004679338 fastq.gz 326.2 MB
EGAF00004679339 fastq.gz 427.4 MB
EGAF00004679340 fastq.gz 414.2 MB
EGAF00004679341 fastq.gz 447.6 MB
EGAF00004679342 fastq.gz 399.7 MB
EGAF00004679343 fastq.gz 366.9 MB
EGAF00004679344 fastq.gz 228.7 MB
EGAF00004679345 fastq.gz 433.7 MB
EGAF00004679346 fastq.gz 294.9 MB
EGAF00004679347 fastq.gz 452.1 MB
EGAF00004679348 fastq.gz 314.9 MB
EGAF00004679349 fastq.gz 429.6 MB
EGAF00004679350 fastq.gz 286.0 MB
EGAF00004679351 fastq.gz 364.4 MB
EGAF00004679352 fastq.gz 296.0 MB
EGAF00004679353 fastq.gz 254.5 MB
EGAF00004679354 fastq.gz 270.1 MB
EGAF00004679355 fastq.gz 293.8 MB
EGAF00004679356 fastq.gz 365.6 MB
EGAF00004679357 fastq.gz 363.8 MB
EGAF00004679358 fastq.gz 418.2 MB
EGAF00004679359 fastq.gz 113.4 MB
EGAF00004679360 fastq.gz 116.7 MB
EGAF00004679361 fastq.gz 123.7 MB
EGAF00004679362 fastq.gz 126.5 MB
EGAF00004679363 fastq.gz 201.7 MB
EGAF00004679364 fastq.gz 202.2 MB
EGAF00004679365 fastq.gz 218.3 MB
EGAF00004679366 fastq.gz 226.1 MB
EGAF00004679367 fastq.gz 164.5 MB
EGAF00004679368 fastq.gz 168.4 MB
EGAF00004679369 fastq.gz 98.6 MB
EGAF00004679370 fastq.gz 103.3 MB
EGAF00004679371 fastq.gz 169.0 MB
EGAF00004679372 fastq.gz 172.4 MB
EGAF00004679373 fastq.gz 182.4 MB
EGAF00004679374 fastq.gz 188.2 MB
EGAF00004679375 fastq.gz 82.1 MB
EGAF00004679376 fastq.gz 84.4 MB
EGAF00004679377 fastq.gz 232.8 MB
EGAF00004679378 fastq.gz 239.6 MB
EGAF00004679379 fastq.gz 181.3 MB
EGAF00004679380 fastq.gz 186.4 MB
EGAF00004679381 fastq.gz 115.6 MB
EGAF00004679382 fastq.gz 119.5 MB
EGAF00004679383 fastq.gz 154.6 MB
EGAF00004679384 fastq.gz 158.0 MB
EGAF00004679385 fastq.gz 110.3 MB
EGAF00004679386 fastq.gz 112.6 MB
EGAF00004679387 fastq.gz 130.1 MB
EGAF00004679388 fastq.gz 132.4 MB
EGAF00004679389 fastq.gz 241.8 MB
EGAF00004679390 fastq.gz 244.8 MB
EGAF00004679391 fastq.gz 228.0 MB
EGAF00004679392 fastq.gz 234.5 MB
EGAF00004679393 fastq.gz 190.0 MB
EGAF00004679394 fastq.gz 193.8 MB
EGAF00004679395 fastq.gz 54.9 MB
EGAF00004679396 fastq.gz 54.8 MB
EGAF00004679397 fastq.gz 23.3 MB
EGAF00004679398 fastq.gz 23.7 MB
EGAF00004679399 fastq.gz 87.1 MB
EGAF00004679400 fastq.gz 87.4 MB
EGAF00004679401 fastq.gz 144.4 MB
EGAF00004679402 fastq.gz 147.0 MB
EGAF00004679403 fastq.gz 153.0 MB
EGAF00004679404 fastq.gz 154.0 MB
EGAF00004679405 fastq.gz 55.8 MB
EGAF00004679406 fastq.gz 56.6 MB
EGAF00004679407 fastq.gz 147.5 MB
EGAF00004679408 fastq.gz 151.2 MB
EGAF00004679409 fastq.gz 96.8 MB
EGAF00004679410 fastq.gz 98.9 MB
EGAF00004679411 fastq.gz 146.9 MB
EGAF00004679412 fastq.gz 150.4 MB
EGAF00004679413 fastq.gz 118.8 MB
EGAF00004679414 fastq.gz 121.9 MB
EGAF00004679415 fastq.gz 191.4 MB
EGAF00004679416 fastq.gz 197.1 MB
EGAF00004679417 fastq.gz 204.8 MB
EGAF00004679418 fastq.gz 210.9 MB
EGAF00004679419 fastq.gz 108.5 MB
EGAF00004679420 fastq.gz 109.6 MB
EGAF00004679421 fastq.gz 156.2 MB
EGAF00004679422 fastq.gz 158.6 MB
EGAF00004679423 fastq.gz 139.9 MB
EGAF00004679424 fastq.gz 143.0 MB
EGAF00004679425 fastq.gz 124.6 MB
EGAF00004679426 fastq.gz 130.3 MB
EGAF00004679427 fastq.gz 144.4 MB
EGAF00004679428 fastq.gz 150.7 MB
EGAF00004679429 fastq.gz 135.2 MB
EGAF00004679430 fastq.gz 138.9 MB
EGAF00004679431 fastq.gz 183.5 MB
EGAF00004679432 fastq.gz 189.8 MB
EGAF00004679433 fastq.gz 185.9 MB
EGAF00004679434 fastq.gz 190.3 MB
EGAF00004679435 fastq.gz 62.1 MB
EGAF00004679436 fastq.gz 62.8 MB
EGAF00004679437 fastq.gz 184.9 MB
EGAF00004679438 fastq.gz 187.3 MB
EGAF00004679439 fastq.gz 160.0 MB
EGAF00004679440 fastq.gz 163.7 MB
EGAF00004679441 fastq.gz 62.7 MB
EGAF00004679442 fastq.gz 62.8 MB
EGAF00004679443 fastq.gz 145.9 MB
EGAF00004679444 fastq.gz 150.1 MB
EGAF00004679445 fastq.gz 170.4 MB
EGAF00004679446 fastq.gz 175.7 MB
EGAF00004679447 fastq.gz 130.2 MB
EGAF00004679448 fastq.gz 133.5 MB
EGAF00004679449 fastq.gz 114.7 MB
EGAF00004679450 fastq.gz 117.6 MB
EGAF00004679451 fastq.gz 110.4 MB
EGAF00004679452 fastq.gz 111.9 MB
EGAF00004679453 fastq.gz 118.3 MB
EGAF00004679454 fastq.gz 123.0 MB
EGAF00004679455 fastq.gz 71.9 MB
EGAF00004679456 fastq.gz 74.2 MB
EGAF00004679457 fastq.gz 64.0 MB
EGAF00004679458 fastq.gz 65.4 MB
EGAF00004679459 fastq.gz 59.2 MB
EGAF00004679460 fastq.gz 60.1 MB
EGAF00004679461 fastq.gz 159.2 MB
EGAF00004679462 fastq.gz 164.4 MB
EGAF00004679463 fastq.gz 96.5 MB
EGAF00004679464 fastq.gz 97.2 MB
EGAF00004679465 fastq.gz 86.0 MB
EGAF00004679466 fastq.gz 88.8 MB
EGAF00004679467 fastq.gz 70.1 MB
EGAF00004679468 fastq.gz 72.6 MB
EGAF00004679469 fastq.gz 128.5 MB
EGAF00004679470 fastq.gz 132.4 MB
EGAF00004679471 fastq.gz 142.4 MB
EGAF00004679472 fastq.gz 145.7 MB
EGAF00004679473 fastq.gz 218.2 MB
EGAF00004679474 fastq.gz 228.4 MB
EGAF00004679475 fastq.gz 139.3 MB
EGAF00004679476 fastq.gz 143.4 MB
EGAF00004679477 fastq.gz 140.3 MB
EGAF00004679478 fastq.gz 142.8 MB
EGAF00004679479 fastq.gz 93.6 MB
EGAF00004679480 fastq.gz 95.6 MB
EGAF00004679481 fastq.gz 87.8 MB
EGAF00004679482 fastq.gz 89.2 MB
184 Files (38.4 GB)