About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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FIT interval CRCs versus Screen-detected CRCs

Formalin-fixed, paraffin-embedded samples from 27 FIT interval CRC and 54 screen-detected CRCs collected in a pilot-program of FIT-based CRC screening in the southwest and northwest regions in the Netherlands, were used in this study. DNA was extracted for 1) Shallow Sequencing (copy number analysis) and 2) TSACP Amplicon Cancer Gene Panel (mutations) of 22 FIT Interval CRCs and 45 screen-detected CRCs.

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Data Access Policy of NKI-AvL TGO

Data Access Policy of NKI-AvL TGO To request access to this specific dataset, and in order to comply with local and (inter)national regulations, please follow the steps described below: 1. Please fill in the information requested on the website: ega.nki.nl 2. Once you’ve submitted this information, the Data Access Committee (DAC) and the NKI-AVL Internal Review Board (IRB) will review your planned study and its goals and judge whether it is competing with our interests. The DAC and IRB can approve or decline your request or request a modification. 3. Upon approval by the IRB, you will receive a Data Transfer Agreement (DTA) that needs to be filled in and signed by the legal representative of your institute / company. 4. Upon acceptance of a signed DTA by our Knowledge Transfer & Contracting Office (KT&C), your party will receive a copy signed by our legal representative, and you will need to submit your access request via the EGA website

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004683 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00004679299 fastq.gz 396.3 MB Report
EGAF00004679300 fastq.gz 403.7 MB Report
EGAF00004679301 fastq.gz 346.5 MB Report
EGAF00004679302 fastq.gz 409.3 MB Report
EGAF00004679303 fastq.gz 305.6 MB Report
EGAF00004679304 fastq.gz 370.5 MB Report
EGAF00004679305 fastq.gz 419.9 MB Report
EGAF00004679306 fastq.gz 458.1 MB Report
EGAF00004679307 fastq.gz 482.0 MB Report
EGAF00004679308 fastq.gz 384.1 MB Report
EGAF00004679309 fastq.gz 313.2 MB Report
EGAF00004679310 fastq.gz 355.8 MB Report
EGAF00004679311 fastq.gz 351.6 MB Report
EGAF00004679312 fastq.gz 361.7 MB Report
EGAF00004679313 fastq.gz 327.3 MB Report
EGAF00004679314 fastq.gz 403.8 MB Report
EGAF00004679315 fastq.gz 417.0 MB Report
EGAF00004679316 fastq.gz 312.5 MB Report
EGAF00004679317 fastq.gz 356.0 MB Report
EGAF00004679318 fastq.gz 374.5 MB Report
EGAF00004679319 fastq.gz 336.0 MB Report
EGAF00004679320 fastq.gz 227.6 MB Report
EGAF00004679321 fastq.gz 295.1 MB Report
EGAF00004679322 fastq.gz 315.7 MB Report
EGAF00004679323 fastq.gz 326.9 MB Report
EGAF00004679324 fastq.gz 336.9 MB Report
EGAF00004679325 fastq.gz 295.2 MB Report
EGAF00004679326 fastq.gz 309.7 MB Report
EGAF00004679327 fastq.gz 426.5 MB Report
EGAF00004679328 fastq.gz 440.9 MB Report
EGAF00004679329 fastq.gz 407.6 MB Report
EGAF00004679330 fastq.gz 375.0 MB Report
EGAF00004679331 fastq.gz 385.6 MB Report
EGAF00004679332 fastq.gz 392.3 MB Report
EGAF00004679333 fastq.gz 333.4 MB Report
EGAF00004679334 fastq.gz 358.3 MB Report
EGAF00004679335 fastq.gz 274.0 MB Report
EGAF00004679336 fastq.gz 245.2 MB Report
EGAF00004679337 fastq.gz 445.2 MB Report
EGAF00004679338 fastq.gz 326.2 MB Report
EGAF00004679339 fastq.gz 427.4 MB Report
EGAF00004679340 fastq.gz 414.2 MB Report
EGAF00004679341 fastq.gz 447.6 MB Report
EGAF00004679342 fastq.gz 399.7 MB Report
EGAF00004679343 fastq.gz 366.9 MB Report
EGAF00004679344 fastq.gz 228.7 MB Report
EGAF00004679345 fastq.gz 433.7 MB Report
EGAF00004679346 fastq.gz 294.9 MB Report
EGAF00004679347 fastq.gz 452.1 MB Report
EGAF00004679348 fastq.gz 314.9 MB Report
EGAF00004679349 fastq.gz 429.6 MB Report
EGAF00004679350 fastq.gz 286.0 MB Report
EGAF00004679351 fastq.gz 364.4 MB Report
EGAF00004679352 fastq.gz 296.0 MB Report
EGAF00004679353 fastq.gz 254.5 MB Report
EGAF00004679354 fastq.gz 270.1 MB Report
EGAF00004679355 fastq.gz 293.8 MB Report
EGAF00004679356 fastq.gz 365.6 MB Report
EGAF00004679357 fastq.gz 363.8 MB Report
EGAF00004679358 fastq.gz 418.2 MB Report
EGAF00004679359 fastq.gz 113.4 MB Report
EGAF00004679360 fastq.gz 116.7 MB Report
EGAF00004679361 fastq.gz 123.7 MB Report
EGAF00004679362 fastq.gz 126.5 MB Report
EGAF00004679363 fastq.gz 201.7 MB Report
EGAF00004679364 fastq.gz 202.2 MB Report
EGAF00004679365 fastq.gz 218.3 MB Report
EGAF00004679366 fastq.gz 226.1 MB Report
EGAF00004679367 fastq.gz 164.5 MB Report
EGAF00004679368 fastq.gz 168.4 MB Report
EGAF00004679369 fastq.gz 98.6 MB Report
EGAF00004679370 fastq.gz 103.3 MB Report
EGAF00004679371 fastq.gz 169.0 MB Report
EGAF00004679372 fastq.gz 172.4 MB Report
EGAF00004679373 fastq.gz 182.4 MB Report
EGAF00004679374 fastq.gz 188.2 MB Report
EGAF00004679375 fastq.gz 82.1 MB Report
EGAF00004679376 fastq.gz 84.4 MB Report
EGAF00004679377 fastq.gz 232.8 MB Report
EGAF00004679378 fastq.gz 239.6 MB Report
EGAF00004679379 fastq.gz 181.3 MB Report
EGAF00004679380 fastq.gz 186.4 MB Report
EGAF00004679381 fastq.gz 115.6 MB Report
EGAF00004679382 fastq.gz 119.5 MB Report
EGAF00004679383 fastq.gz 154.6 MB Report
EGAF00004679384 fastq.gz 158.0 MB Report
EGAF00004679385 fastq.gz 110.3 MB Report
EGAF00004679386 fastq.gz 112.6 MB Report
EGAF00004679387 fastq.gz 130.1 MB Report
EGAF00004679388 fastq.gz 132.4 MB Report
EGAF00004679389 fastq.gz 241.8 MB Report
EGAF00004679390 fastq.gz 244.8 MB Report
EGAF00004679391 fastq.gz 228.0 MB Report
EGAF00004679392 fastq.gz 234.5 MB Report
EGAF00004679393 fastq.gz 190.0 MB Report
EGAF00004679394 fastq.gz 193.8 MB Report
EGAF00004679395 fastq.gz 54.9 MB Report
EGAF00004679396 fastq.gz 54.8 MB Report
EGAF00004679397 fastq.gz 23.3 MB Report
EGAF00004679398 fastq.gz 23.7 MB Report
EGAF00004679399 fastq.gz 87.1 MB Report
EGAF00004679400 fastq.gz 87.4 MB Report
EGAF00004679401 fastq.gz 144.4 MB Report
EGAF00004679402 fastq.gz 147.0 MB Report
EGAF00004679403 fastq.gz 153.0 MB Report
EGAF00004679404 fastq.gz 154.0 MB Report
EGAF00004679405 fastq.gz 55.8 MB Report
EGAF00004679406 fastq.gz 56.6 MB Report
EGAF00004679407 fastq.gz 147.5 MB Report
EGAF00004679408 fastq.gz 151.2 MB Report
EGAF00004679409 fastq.gz 96.8 MB Report
EGAF00004679410 fastq.gz 98.9 MB Report
EGAF00004679411 fastq.gz 146.9 MB Report
EGAF00004679412 fastq.gz 150.4 MB Report
EGAF00004679413 fastq.gz 118.8 MB Report
EGAF00004679414 fastq.gz 121.9 MB Report
EGAF00004679415 fastq.gz 191.4 MB Report
EGAF00004679416 fastq.gz 197.1 MB Report
EGAF00004679417 fastq.gz 204.8 MB Report
EGAF00004679418 fastq.gz 210.9 MB Report
EGAF00004679419 fastq.gz 108.5 MB Report
EGAF00004679420 fastq.gz 109.6 MB Report
EGAF00004679421 fastq.gz 156.2 MB Report
EGAF00004679422 fastq.gz 158.6 MB Report
EGAF00004679423 fastq.gz 139.9 MB Report
EGAF00004679424 fastq.gz 143.0 MB Report
EGAF00004679425 fastq.gz 124.6 MB Report
EGAF00004679426 fastq.gz 130.3 MB Report
EGAF00004679427 fastq.gz 144.4 MB Report
EGAF00004679428 fastq.gz 150.7 MB Report
EGAF00004679429 fastq.gz 135.2 MB Report
EGAF00004679430 fastq.gz 138.9 MB Report
EGAF00004679431 fastq.gz 183.5 MB Report
EGAF00004679432 fastq.gz 189.8 MB Report
EGAF00004679433 fastq.gz 185.9 MB Report
EGAF00004679434 fastq.gz 190.3 MB Report
EGAF00004679435 fastq.gz 62.1 MB Report
EGAF00004679436 fastq.gz 62.8 MB Report
EGAF00004679437 fastq.gz 184.9 MB Report
EGAF00004679438 fastq.gz 187.3 MB Report
EGAF00004679439 fastq.gz 160.0 MB Report
EGAF00004679440 fastq.gz 163.7 MB Report
EGAF00004679441 fastq.gz 62.7 MB Report
EGAF00004679442 fastq.gz 62.8 MB Report
EGAF00004679443 fastq.gz 145.9 MB Report
EGAF00004679444 fastq.gz 150.1 MB Report
EGAF00004679445 fastq.gz 170.4 MB Report
EGAF00004679446 fastq.gz 175.7 MB Report
EGAF00004679447 fastq.gz 130.2 MB Report
EGAF00004679448 fastq.gz 133.5 MB Report
EGAF00004679449 fastq.gz 114.7 MB Report
EGAF00004679450 fastq.gz 117.6 MB Report
EGAF00004679451 fastq.gz 110.4 MB Report
EGAF00004679452 fastq.gz 111.9 MB Report
EGAF00004679453 fastq.gz 118.3 MB Report
EGAF00004679454 fastq.gz 123.0 MB Report
EGAF00004679455 fastq.gz 71.9 MB Report
EGAF00004679456 fastq.gz 74.2 MB Report
EGAF00004679457 fastq.gz 64.0 MB Report
EGAF00004679458 fastq.gz 65.4 MB Report
EGAF00004679459 fastq.gz 59.2 MB Report
EGAF00004679460 fastq.gz 60.1 MB Report
EGAF00004679461 fastq.gz 159.2 MB Report
EGAF00004679462 fastq.gz 164.4 MB Report
EGAF00004679463 fastq.gz 96.5 MB Report
EGAF00004679464 fastq.gz 97.2 MB Report
EGAF00004679465 fastq.gz 86.0 MB Report
EGAF00004679466 fastq.gz 88.8 MB Report
EGAF00004679467 fastq.gz 70.1 MB Report
EGAF00004679468 fastq.gz 72.6 MB Report
EGAF00004679469 fastq.gz 128.5 MB Report
EGAF00004679470 fastq.gz 132.4 MB Report
EGAF00004679471 fastq.gz 142.4 MB Report
EGAF00004679472 fastq.gz 145.7 MB Report
EGAF00004679473 fastq.gz 218.2 MB Report
EGAF00004679474 fastq.gz 228.4 MB Report
EGAF00004679475 fastq.gz 139.3 MB Report
EGAF00004679476 fastq.gz 143.4 MB Report
EGAF00004679477 fastq.gz 140.3 MB Report
EGAF00004679478 fastq.gz 142.8 MB Report
EGAF00004679479 fastq.gz 93.6 MB Report
EGAF00004679480 fastq.gz 95.6 MB Report
EGAF00004679481 fastq.gz 87.8 MB Report
EGAF00004679482 fastq.gz 89.2 MB Report
184 Files (38.4 GB)