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Whole transcriptome sequencing datasets for Low-grade Serous Ovarian Carcinoma

This dataset includes whole transcriptome sequencing reads from 8 cell lines based on TruSeq stranded mRNA kit (Illumina). They are all 2*75bp reads sequenced using Illumina NextSeq500.

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Data access policy for Low-grade Serous Ovarian Carcinoma

DATA ACCESS AGREEMENT This agreement governs the terms on which access will be granted to the sequencing data generated in the "Multiomics Characterization of Low-grade Serous Ovarian Carcinoma project" modified from THE WELLCOME TRUST CASE-CONTROL CONSORTIUM DATA ACCESS AGREEMENT. In signing this agreement, You are agreeing to be bound by the terms and conditions of access set out in this agreement. For the sake of clarity, the terms of access set out in this agreement apply both to the User and the User’s Institution (as defined below). User Institution and User are referred to within the agreement as “You” and “Your” shall be construed accordingly. Definitions: Consortium means Low-grade Serous Ovarian Carcinoma Data Access Commitee. Data means all and any human genetic data obtained from the Consortium. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto. User means a researcher whose User Institution has previously completed this Data Access Agreement and has received acknowledgement of its acceptance. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. User Institution means the organisation at which the User is employed, affiliated or enrolled. Terms and Conditions: In signing this Agreement: 1. You agree to use the Data only for the advancement of medical research, according to the consent obtained from sample donors. 2. You agree not to use the data for the creation of products for sale or for any commercial purpose. 3. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4. You agree not to attempt to link the data provided under this agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevent access committees. 5. You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator outwith the same Institution, the third party must make a separate application for access to the Data. 6. You agree to use the data for the approved purpose and project described in your application; use of the data for a new purpose or project will require a new application and approval. 7. You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 8. You agree to abide by the terms outlined in the Consortium 'Publications Policy' as set out in Schedule 1. 9. You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the data, and the role of the Consortium and the relevant primary collectors and their funders. Suitable wording will be provided once you contact Consortium. 10. You accept that the Consortium, the original data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied: a) bear no legal responsibility for the accuracy or comprehensiveness of the Data; and b) accept no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason. 11. You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 12. You recognise that nothing in this agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. The User Institution has the right to develop intellectual property based on comparisons with their own data. 13. You accept that this agreement will terminate immediately upon any breach of this agreement by You and You will be required to destroy any Data held. 14. You accept that it may be necessary for the Consortium or its appointed agent to alter the terms of this agreement from time to time in order to address new concerns. In this event, the Consortium or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement. 15. You agree that you will submit a report to the Consortium Data Access Committee, if requested, on completion of the agreed purpose. The Consortium Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution. 16. You accept that the Data is protected by and subject to international laws and that You are responsible for ensuring compliance with any such applicable law. The Consortium Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in the EAA.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004724 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00004719780 fastq.gz 739.9 MB
EGAF00004719781 fastq.gz 753.8 MB
EGAF00004719782 fastq.gz 722.2 MB
EGAF00004719783 fastq.gz 737.2 MB
EGAF00004719784 fastq.gz 735.4 MB
EGAF00004719785 fastq.gz 749.9 MB
EGAF00004719786 fastq.gz 728.3 MB
EGAF00004719787 fastq.gz 742.7 MB
EGAF00004719788 fastq.gz 665.0 MB
EGAF00004719789 fastq.gz 690.3 MB
EGAF00004719790 fastq.gz 649.2 MB
EGAF00004719791 fastq.gz 671.7 MB
EGAF00004719792 fastq.gz 662.0 MB
EGAF00004719793 fastq.gz 685.8 MB
EGAF00004719794 fastq.gz 655.3 MB
EGAF00004719795 fastq.gz 677.6 MB
EGAF00004719796 fastq.gz 588.4 MB
EGAF00004719797 fastq.gz 600.6 MB
EGAF00004719798 fastq.gz 574.6 MB
EGAF00004719799 fastq.gz 587.0 MB
EGAF00004719800 fastq.gz 584.2 MB
EGAF00004719801 fastq.gz 596.6 MB
EGAF00004719802 fastq.gz 578.8 MB
EGAF00004719803 fastq.gz 590.6 MB
EGAF00004719804 fastq.gz 612.6 MB
EGAF00004719805 fastq.gz 627.0 MB
EGAF00004719806 fastq.gz 598.1 MB
EGAF00004719807 fastq.gz 613.1 MB
EGAF00004719808 fastq.gz 609.6 MB
EGAF00004719809 fastq.gz 624.2 MB
EGAF00004719810 fastq.gz 603.5 MB
EGAF00004719811 fastq.gz 617.8 MB
EGAF00004719812 fastq.gz 516.9 MB
EGAF00004719813 fastq.gz 528.3 MB
EGAF00004719814 fastq.gz 504.4 MB
EGAF00004719815 fastq.gz 516.9 MB
EGAF00004719816 fastq.gz 514.1 MB
EGAF00004719817 fastq.gz 526.4 MB
EGAF00004719818 fastq.gz 508.3 MB
EGAF00004719819 fastq.gz 520.3 MB
EGAF00004719820 fastq.gz 535.4 MB
EGAF00004719821 fastq.gz 549.8 MB
EGAF00004719822 fastq.gz 521.3 MB
EGAF00004719823 fastq.gz 536.0 MB
EGAF00004719824 fastq.gz 532.3 MB
EGAF00004719825 fastq.gz 547.1 MB
EGAF00004719826 fastq.gz 525.4 MB
EGAF00004719827 fastq.gz 539.9 MB
EGAF00004719828 fastq.gz 711.7 MB
EGAF00004719829 fastq.gz 729.0 MB
EGAF00004719830 fastq.gz 695.9 MB
EGAF00004719831 fastq.gz 713.1 MB
EGAF00004719832 fastq.gz 707.9 MB
EGAF00004719833 fastq.gz 725.3 MB
EGAF00004719834 fastq.gz 701.0 MB
EGAF00004719835 fastq.gz 717.4 MB
EGAF00004719836 fastq.gz 389.7 MB
EGAF00004719837 fastq.gz 402.8 MB
EGAF00004719838 fastq.gz 380.8 MB
EGAF00004719839 fastq.gz 393.1 MB
EGAF00004719840 fastq.gz 388.3 MB
EGAF00004719841 fastq.gz 401.2 MB
EGAF00004719842 fastq.gz 384.0 MB
EGAF00004719843 fastq.gz 396.2 MB
64 Files (38.1 GB)