cfDNA
The mutational status of 112 recurrently mutated genes in B-cell lymphoma was examined by targeted next-generation sequencing (NGS). Libraries were performed with 15-30 ng of cfDNA obtained from plasma using molecular-barcoded library adapters (ThruPLEX Tag-seq kit; Takara) coupled with a custom hybridization capture based method (SureSelect XT Target Enrichment System Capture strategy, Agilent Technologies Inc.) and sequenced in a MiSeq instrument (Illumina, 2x150bp).
- 04/11/2020
- 79 samples
- DAC: EGAC00001001793
- Technology: Illumina MiSeq
DUO:0000005 version: 2019-01-07
general research use and clinical care
This data use limitation indicates that use is allowed for health/medical/biomedical purposes and other biological research, including the study of population origins or ancestry.
DUO:0000014 version: 2019-01-07
research use only
This data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).
DUO:0000015 version: 2019-01-07
no general methods research
This data use modifier indicates that use does not allow methods development research (e.g., development of software or algorithms).
DUO:0000021 version: 2019-01-07
ethics approval required
This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.
DUO:0000026 version: 2019-01-07
user specific restriction
This data use modifier indicates that use is limited to use by approved users.
DUO:0000027 version: 2019-01-07
project specific restriction
This data use modifier indicates that use is limited to use within an approved project.
Contact the DAC for additional information.
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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001004733 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
|
|---|---|---|---|---|
| EGAF00004834702 | bam | 605.9 MB | Report |
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| EGAF00004834705 | bam | 361.9 MB | Report |
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| EGAF00004834709 | bam | 352.5 MB | Report |
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| EGAF00004834710 | bam | 931.4 MB | Report |
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| EGAF00004834711 | bam | 755.7 MB | Report |
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| EGAF00004834712 | bam | 771.2 MB | Report |
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| EGAF00004834714 | bam | 566.6 MB | Report |
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| EGAF00004834715 | bam | 333.3 MB | Report |
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| EGAF00004834716 | bam | 576.0 MB | Report |
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| EGAF00004834717 | bam | 862.8 MB | Report |
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| EGAF00004834718 | bam | 302.8 MB | Report |
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| EGAF00004834720 | bam | 306.7 MB | Report |
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| EGAF00004834721 | bam | 849.7 MB | Report |
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| EGAF00004834722 | bam | 1.0 GB | Report |
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| EGAF00004834724 | bam | 551.5 MB | Report |
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| EGAF00004834725 | bam | 518.3 MB | Report |
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| EGAF00004834726 | bam | 560.4 MB | Report |
|
| EGAF00004834727 | bam | 1.0 GB | Report |
|
| EGAF00004834728 | bam | 255.0 MB | Report |
|
| EGAF00004834729 | bam | 908.2 MB | Report |
|
| EGAF00004834730 | bam | 369.1 MB | Report |
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| EGAF00004834732 | bam | 663.5 MB | Report |
|
| EGAF00004834733 | bam | 261.5 MB | Report |
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| EGAF00004834734 | bam | 432.3 MB | Report |
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| EGAF00004834736 | bam | 402.3 MB | Report |
|
| EGAF00004834737 | bam | 566.1 MB | Report |
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| EGAF00004834739 | bam | 158.2 MB | Report |
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| EGAF00004834741 | bam | 356.1 MB | Report |
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| EGAF00004834742 | bam | 454.0 MB | Report |
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| EGAF00004834743 | bam | 1.1 GB | Report |
|
| EGAF00004834745 | bam | 565.0 MB | Report |
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| EGAF00004834746 | bam | 692.7 MB | Report |
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| EGAF00004834747 | bam | 686.8 MB | Report |
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| EGAF00004834748 | bam | 535.3 MB | Report |
|
| EGAF00004834749 | bam | 1.0 GB | Report |
|
| EGAF00004834750 | bam | 1.2 GB | Report |
|
| EGAF00004834751 | bam | 502.5 MB | Report |
|
| EGAF00004834754 | bam | 497.1 MB | Report |
|
| EGAF00004834755 | bam | 898.8 MB | Report |
|
| EGAF00004834756 | bam | 987.0 MB | Report |
|
| EGAF00004834757 | bam | 390.6 MB | Report |
|
| EGAF00004834758 | bam | 507.8 MB | Report |
|
| EGAF00004834760 | bam | 703.1 MB | Report |
|
| EGAF00004834761 | bam | 756.1 MB | Report |
|
| EGAF00004834765 | bam | 408.8 MB | Report |
|
| EGAF00004834766 | bam | 918.4 MB | Report |
|
| EGAF00004834768 | bam | 223.8 MB | Report |
|
| EGAF00004834769 | bam | 1.1 GB | Report |
|
| EGAF00004834770 | bam | 493.1 MB | Report |
|
| EGAF00004834773 | bam | 284.3 MB | Report |
|
| EGAF00004834774 | bam | 246.1 MB | Report |
|
| EGAF00004834776 | bam | 565.3 MB | Report |
|
| EGAF00004834780 | bam | 1.2 GB | Report |
|
| EGAF00004834781 | bam | 305.8 MB | Report |
|
| EGAF00004834784 | bam | 213.8 MB | Report |
|
| EGAF00004834787 | bam | 278.7 MB | Report |
|
| EGAF00004834788 | bam | 340.2 MB | Report |
|
| EGAF00004834789 | bam | 1.0 GB | Report |
|
| EGAF00004834794 | bam | 200.3 MB | Report |
|
| EGAF00004834795 | bam | 659.5 MB | Report |
|
| EGAF00004834799 | bam | 393.1 MB | Report |
|
| EGAF00004834800 | bam | 571.7 MB | Report |
|
| EGAF00004834801 | bam | 311.9 MB | Report |
|
| EGAF00004834802 | bam | 469.9 MB | Report |
|
| EGAF00004834804 | bam | 576.2 MB | Report |
|
| EGAF00004834805 | bam | 729.2 MB | Report |
|
| EGAF00004834806 | bam | 366.6 MB | Report |
|
| EGAF00004834807 | bam | 647.3 MB | Report |
|
| EGAF00004834808 | bam | 582.2 MB | Report |
|
| EGAF00004834809 | bam | 211.2 MB | Report |
|
| EGAF00004834811 | bam | 251.7 MB | Report |
|
| EGAF00004834812 | bam | 456.6 MB | Report |
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| EGAF00004834813 | bam | 506.8 MB | Report |
|
| EGAF00004834814 | bam | 623.1 MB | Report |
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| EGAF00004834815 | bam | 937.3 MB | Report |
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| EGAF00004834816 | bam | 1.1 GB | Report |
|
| EGAF00004834817 | bam | 825.0 MB | Report |
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| EGAF00004834818 | bam | 759.0 MB | Report |
|
| EGAF00004834821 | bam | 671.5 MB | Report |
|
| 79 Files (46.6 GB) | ||||