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Dataset

cfDNA

Dataset ID	Technology	Samples
EGAD00001006566	N/A	79

Dataset Description

The mutational status of 112 recurrently mutated genes in B-cell lymphoma was examined by targeted next-generation sequencing (NGS). Libraries were performed with 15-30 ng of cfDNA obtained from plasma using molecular-barcoded library adapters (ThruPLEX Tag-seq kit; Takara) coupled with a custom hybridization capture based method (SureSelect XT Target Enrichment System Capture strategy, Agilent Technologies Inc.) and sequenced in a MiSeq instrument (Illumina, 2x150bp).

Data Use Conditions

GRU RUO NMDS IRB US PS

See further information on Data Use Conditions

Label	Code	Version
obsolete general research use and clinical care	DUO:0000005	2019-01-07
obsolete research use only	DUO:0000014	2019-01-07
no general methods research	DUO:0000015	2019-01-07
ethics approval required	DUO:0000021	2019-01-07
user specific restriction	DUO:0000026	2019-01-07
project specific restriction	DUO:0000027	2019-01-07

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

Lymphoid Neoplasms Data Access Commitee
Contact person: Armando Lopez-Guillermo
Email: alopezg [at] clinic [dot] cat
More details: EGAC00001001793

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This dataset is featured in 1 study

Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID	Study Title	Study Type
EGAS00001004733	Mutational Landscape and Tumor Burden Assessed by Cell-Free DNA in Diffuse Large B-Cell Lymphoma: a Population-based Study	Other

EGA Beacon