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41 CRC Exome bam + 4 CRC paired fastq from EGAS00001002477 study

This dataset contain 45 pairs of colorectal tumor and adjacent normal tissue. Four of them are from a previous study EGAS00001002477. For each sample a BAM was generated by aligning to GRCh37. Those colorectal cancer all have the MSI phenotype.

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MSI-Exome-Transcriptome-DAC Team Microsatellites Instability and Cancer, INSERM Hospital Saint-Antoine, Paris 12, France Carte d'identité des tumeurs, French league against cancer, Paris France

Please contact quentin DOT letourneur AT inserm DOT fr with alex DOT duval AT inserm DOT fr as copy so that they can send you the document to complete and consider your data access request. Note that data access request is done per dataset but only one document will be sent if you need more than one.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002477 Other
EGAS00001004863 Cancer Genomics
  • no change to the dataset added data to the study
  • no change to the dataset, updated study title and description
  • Dataset Released

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001653949 txt.gz 4.5 GB
EGAF00001653950 txt.gz 4.6 GB
EGAF00001653951 txt.gz 5.0 GB
EGAF00001653952 txt.gz 5.1 GB
EGAF00001653989 txt.gz 4.9 GB
EGAF00001653990 txt.gz 5.0 GB
EGAF00001653991 txt.gz 5.2 GB
EGAF00001653992 txt.gz 5.3 GB
EGAF00001653993 txt.gz 3.9 GB
EGAF00001653994 txt.gz 4.0 GB
EGAF00001653995 txt.gz 5.2 GB
EGAF00001653996 txt.gz 5.2 GB
EGAF00001653997 txt.gz 5.1 GB
EGAF00001653998 txt.gz 5.1 GB
EGAF00001653999 txt.gz 5.2 GB
EGAF00001654000 txt.gz 5.3 GB
EGAF00004919289 bam 4.1 GB
EGAF00004919290 bam 8.5 GB
EGAF00004919291 bam 4.4 GB
EGAF00004919292 bam 7.5 GB
EGAF00004919293 bam 6.8 GB
EGAF00004919294 bam 8.1 GB
EGAF00004919295 bam 4.7 GB
EGAF00004919296 bam 6.2 GB
EGAF00004919297 bam 4.6 GB
EGAF00004919298 bam 7.6 GB
EGAF00004919299 bam 4.1 GB
EGAF00004919300 bam 3.6 GB
EGAF00004919301 bam 3.6 GB
EGAF00004919302 bam 7.6 GB
EGAF00004919303 bam 7.6 GB
EGAF00004919304 bam 3.7 GB
EGAF00004919305 bam 3.9 GB
EGAF00004919306 bam 7.5 GB
EGAF00004919307 bam 7.1 GB
EGAF00004919308 bam 3.4 GB
EGAF00004919309 bam 8.7 GB
EGAF00004919310 bam 3.7 GB
EGAF00004919311 bam 4.5 GB
EGAF00004919312 bam 6.7 GB
EGAF00004919313 bam 7.6 GB
EGAF00004919314 bam 4.6 GB
EGAF00004919315 bam 7.4 GB
EGAF00004919316 bam 8.1 GB
EGAF00004919317 bam 7.8 GB
EGAF00004919318 bam 3.8 GB
EGAF00004919319 bam 7.4 GB
EGAF00004919320 bam 4.0 GB
EGAF00004919321 bam 7.7 GB
EGAF00004919322 bam 4.0 GB
EGAF00004919323 bam 6.6 GB
EGAF00004919324 bam 3.7 GB
EGAF00004919325 bam 6.8 GB
EGAF00004919326 bam 3.9 GB
EGAF00004919327 bam 8.2 GB
EGAF00004919328 bam 4.3 GB
EGAF00004919329 bam 7.3 GB
EGAF00004919330 bam 4.3 GB
EGAF00004919331 bam 4.4 GB
EGAF00004919332 bam 3.7 GB
EGAF00004919333 bam 8.1 GB
EGAF00004919334 bam 4.3 GB
EGAF00004919335 bam 7.7 GB
EGAF00004919336 bam 4.4 GB
EGAF00004919337 bam 7.9 GB
EGAF00004919338 bam 6.8 GB
EGAF00004919339 bam 7.5 GB
EGAF00004919340 bam 8.3 GB
EGAF00004919341 bam 4.5 GB
EGAF00004919342 bam 6.7 GB
EGAF00004919343 bam 6.6 GB
EGAF00004919344 bam 6.4 GB
EGAF00004919345 bam 6.4 GB
EGAF00004919346 bam 3.7 GB
EGAF00004919347 bam 4.0 GB
EGAF00004919348 bam 3.8 GB
EGAF00004919349 bam 8.5 GB
EGAF00004919350 bam 7.6 GB
EGAF00004919351 bam 4.2 GB
EGAF00004919352 bam 4.5 GB
EGAF00004919353 bam 7.2 GB
EGAF00004919354 bam 3.6 GB
EGAF00004919355 bam 4.1 GB
EGAF00004919356 bam 6.0 GB
EGAF00004919357 bam 4.2 GB
EGAF00004919358 bam 4.2 GB
EGAF00004919359 bam 4.3 GB
EGAF00004919360 bam 7.8 GB
EGAF00004919361 bam 8.2 GB
EGAF00004919362 bam 8.5 GB
EGAF00004919363 bam 4.1 GB
EGAF00004919364 bam 3.8 GB
EGAF00004919365 bam 6.9 GB
EGAF00004919366 bam 8.4 GB
EGAF00004919367 bam 6.7 GB
EGAF00004919368 bam 4.7 GB
EGAF00004919369 bam 4.1 GB
EGAF00004919370 bam 4.2 GB
98 Files (555.3 GB)