About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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RNA sequencing data of pretreatment tumor biopsies of patients treated in the OpACIN-neo trial

The dataset includes RNA sequencing on pre-treatment tumor biopsies of lymph node metastases (n=65)

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The Institutional Review Board of the Netherlands Cancer Institute (NKI IRB)

Data is available under reasonable request. All data requests will be reviewed by the NKI IRB and must be supported by the Principal Investigator of the study.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004833 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00004890169 fastq.gz 1.3 GB Report
EGAF00004890170 fastq.gz 829.3 MB Report
EGAF00004890171 fastq.gz 867.7 MB Report
EGAF00004890172 fastq.gz 1.1 GB Report
EGAF00004890173 fastq.gz 1.3 GB Report
EGAF00004890174 fastq.gz 744.5 MB Report
EGAF00004890175 fastq.gz 904.9 MB Report
EGAF00004890176 fastq.gz 1.0 GB Report
EGAF00004890177 fastq.gz 1.1 GB Report
EGAF00004890178 fastq.gz 1.4 GB Report
EGAF00004890179 fastq.gz 1.3 GB Report
EGAF00004890180 fastq.gz 848.0 MB Report
EGAF00004890181 fastq.gz 1.1 GB Report
EGAF00004890182 fastq.gz 1.3 GB Report
EGAF00004890183 fastq.gz 907.5 MB Report
EGAF00004890184 fastq.gz 801.2 MB Report
EGAF00004890185 fastq.gz 869.7 MB Report
EGAF00004890186 fastq.gz 1.2 GB Report
EGAF00004890187 fastq.gz 1.4 GB Report
EGAF00004890188 fastq.gz 871.9 MB Report
EGAF00004890189 fastq.gz 1.4 GB Report
EGAF00004890190 fastq.gz 888.6 MB Report
EGAF00004890191 fastq.gz 897.0 MB Report
EGAF00004890192 fastq.gz 1.1 GB Report
EGAF00004890193 fastq.gz 779.2 MB Report
EGAF00004890194 fastq.gz 624.4 MB Report
EGAF00004890195 fastq.gz 1.1 GB Report
EGAF00004890196 fastq.gz 1.2 GB Report
EGAF00004890197 fastq.gz 1.2 GB Report
EGAF00004890198 fastq.gz 1.2 GB Report
EGAF00004890199 fastq.gz 1.0 GB Report
EGAF00004890200 fastq.gz 1.5 GB Report
EGAF00004890201 fastq.gz 966.1 MB Report
EGAF00004890202 fastq.gz 753.4 MB Report
EGAF00004890203 fastq.gz 843.6 MB Report
EGAF00004890204 fastq.gz 730.0 MB Report
EGAF00004890205 fastq.gz 1.1 GB Report
EGAF00004890206 fastq.gz 651.4 MB Report
EGAF00004890207 fastq.gz 1.2 GB Report
EGAF00004890208 fastq.gz 889.4 MB Report
EGAF00004890209 fastq.gz 880.1 MB Report
EGAF00004890210 fastq.gz 877.7 MB Report
EGAF00004890211 fastq.gz 609.5 MB Report
EGAF00004890212 fastq.gz 701.0 MB Report
EGAF00004890213 fastq.gz 729.7 MB Report
EGAF00004890214 fastq.gz 900.1 MB Report
EGAF00004890215 fastq.gz 975.7 MB Report
EGAF00004890216 fastq.gz 860.7 MB Report
EGAF00004890217 fastq.gz 1.0 GB Report
EGAF00004890218 fastq.gz 1.9 GB Report
EGAF00004890219 fastq.gz 1.3 GB Report
EGAF00004890220 fastq.gz 1.1 GB Report
EGAF00004890221 fastq.gz 1.1 GB Report
EGAF00004890222 fastq.gz 894.1 MB Report
EGAF00004890223 fastq.gz 758.2 MB Report
EGAF00004890224 fastq.gz 353.3 MB Report
EGAF00004890225 fastq.gz 948.9 MB Report
EGAF00004890226 fastq.gz 541.8 MB Report
EGAF00004890227 fastq.gz 703.8 MB Report
EGAF00004890228 fastq.gz 1.1 GB Report
EGAF00004890229 fastq.gz 1.0 GB Report
EGAF00004890230 fastq.gz 1.1 GB Report
EGAF00004890231 fastq.gz 951.1 MB Report
EGAF00004890232 fastq.gz 881.4 MB Report
EGAF00004890489 fastq.gz 1.3 GB Report
65 Files (64.6 GB)