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Resequencing candidate genes for male spermatogenic impairment

This study aims to identify novel candidate variants from human Y-chromosomal genes DAZ, BPY2 and CDY1/2 by resequencing the coding regions of these genes from male patients with spermatogenic impairment. The coding regions of the genes plus a selection of phylogenetically informative Y-chromosomal markers have been amplified by standard PCR, amplicon lengths range from 178 to 486 bp. Amplicons were quantified by gel electrophoresis and pooled in approx. equimolar concentrations per patient. For each of the 480 submitted samples, approx. 1 microgram of amplified DNA pool was provided in a total volume of 120 microlitres. The samples were indexed and libraries prepared for PE250bp Illumina MiSeq runs. This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/ .

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Study ID Study Title Study Type
EGAS00001002157 Resequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00003441505 cram 3.6 MB
EGAF00003441506 cram 3.9 MB
EGAF00003441507 cram 3.9 MB
EGAF00003441508 cram 3.8 MB
EGAF00003441509 cram 4.9 MB
EGAF00003441542 cram 3.7 MB
EGAF00003441543 cram 3.6 MB
EGAF00003441548 cram 3.7 MB
EGAF00003441549 cram 4.0 MB
EGAF00003441550 cram 4.0 MB
EGAF00003441551 cram 4.2 MB
EGAF00003441552 cram 4.3 MB
EGAF00003441553 cram 5.2 MB
EGAF00003441554 cram 5.3 MB
EGAF00003441555 cram 3.6 MB
EGAF00003441556 cram 4.2 MB
EGAF00003441557 cram 4.1 MB
EGAF00003441558 cram 4.1 MB
EGAF00003441559 cram 3.9 MB
EGAF00003441560 cram 3.9 MB
EGAF00003441561 cram 4.8 MB
EGAF00003441562 cram 4.4 MB
EGAF00003441563 cram 3.9 MB
EGAF00003441564 cram 4.5 MB
EGAF00003441565 cram 3.4 MB
EGAF00003441566 cram 4.0 MB
EGAF00003441567 cram 4.5 MB
EGAF00003441568 cram 4.0 MB
EGAF00003441569 cram 4.9 MB
EGAF00003441570 cram 4.7 MB
EGAF00003441571 cram 5.0 MB
EGAF00003441572 cram 3.9 MB
EGAF00003441573 cram 4.4 MB
EGAF00003441574 cram 4.9 MB
EGAF00003441575 cram 4.5 MB
EGAF00003441576 cram 4.5 MB
EGAF00003441606 cram 5.3 MB
EGAF00003441607 cram 5.1 MB
EGAF00003441608 cram 4.3 MB
EGAF00003441609 cram 4.4 MB
EGAF00003441610 cram 4.6 MB
EGAF00003441611 cram 4.0 MB
EGAF00003441612 cram 5.2 MB
EGAF00003441613 cram 4.5 MB
EGAF00003441614 cram 4.6 MB
EGAF00003441615 cram 4.8 MB
EGAF00003441616 cram 4.7 MB
EGAF00003441617 cram 4.9 MB
EGAF00003441618 cram 4.6 MB
EGAF00003441619 cram 5.1 MB
EGAF00003441620 cram 4.1 MB
EGAF00003441621 cram 4.3 MB
EGAF00003441622 cram 5.1 MB
EGAF00003441623 cram 4.1 MB
EGAF00003441624 cram 4.0 MB
EGAF00003441625 cram 3.8 MB
EGAF00003441626 cram 3.9 MB
EGAF00003441627 cram 4.4 MB
EGAF00003441628 cram 4.4 MB
EGAF00003441629 cram 4.4 MB
EGAF00003441630 cram 4.3 MB
EGAF00003441631 cram 5.3 MB
EGAF00003441632 cram 4.9 MB
EGAF00003441633 cram 3.7 MB
EGAF00003441634 cram 4.6 MB
EGAF00003441693 cram 4.9 MB
EGAF00003441694 cram 4.7 MB
EGAF00003441695 cram 4.7 MB
EGAF00003441696 cram 4.9 MB
EGAF00003441697 cram 4.0 MB
EGAF00003441698 cram 4.6 MB
EGAF00003441699 cram 4.2 MB
EGAF00003441700 cram 5.2 MB
EGAF00003441701 cram 4.1 MB
EGAF00003441702 cram 4.4 MB
EGAF00003441703 cram 4.1 MB
EGAF00003441704 cram 4.2 MB
EGAF00003441705 cram 4.2 MB
EGAF00003441706 cram 3.9 MB
EGAF00003441707 cram 4.3 MB
EGAF00003441708 cram 4.2 MB
EGAF00003441709 cram 3.8 MB
EGAF00003441710 cram 4.6 MB
EGAF00003441711 cram 4.3 MB
EGAF00003441712 cram 4.4 MB
EGAF00003441713 cram 3.9 MB
EGAF00003441714 cram 4.3 MB
EGAF00003441715 cram 4.2 MB
EGAF00003441716 cram 4.1 MB
EGAF00003441717 cram 4.6 MB
EGAF00003441718 cram 3.9 MB
EGAF00003441719 cram 3.7 MB
EGAF00003441720 cram 4.6 MB
EGAF00003441721 cram 4.5 MB
EGAF00003441752 cram 4.9 MB
EGAF00003441753 cram 4.2 MB
EGAF00003441754 cram 3.9 MB
EGAF00003441755 cram 3.8 MB
EGAF00003441756 cram 4.0 MB
EGAF00003441757 cram 4.7 MB
EGAF00003441758 cram 4.4 MB
EGAF00003441759 cram 4.1 MB
EGAF00003441760 cram 3.7 MB
EGAF00003441761 cram 3.6 MB
EGAF00003441762 cram 3.9 MB
EGAF00003441763 cram 4.6 MB
EGAF00003441764 cram 4.0 MB
EGAF00003441765 cram 4.8 MB
EGAF00003441766 cram 4.6 MB
EGAF00003441767 cram 4.8 MB
EGAF00003441768 cram 3.9 MB
EGAF00003441769 cram 4.2 MB
EGAF00003441770 cram 4.0 MB
EGAF00003441771 cram 4.5 MB
EGAF00003441772 cram 3.9 MB
EGAF00003441773 cram 3.7 MB
EGAF00003441774 cram 4.1 MB
EGAF00003441775 cram 3.7 MB
EGAF00003441776 cram 3.7 MB
EGAF00003441777 cram 4.6 MB
EGAF00003441778 cram 4.4 MB
EGAF00003441779 cram 4.7 MB
EGAF00003441780 cram 4.5 MB
EGAF00003441810 cram 4.3 MB
EGAF00003441811 cram 4.2 MB
EGAF00003441812 cram 4.1 MB
EGAF00003441813 cram 4.5 MB
EGAF00003441814 cram 4.2 MB
EGAF00003441815 cram 4.5 MB
EGAF00003441816 cram 4.0 MB
EGAF00003441817 cram 4.5 MB
EGAF00003441818 cram 4.4 MB
EGAF00003441819 cram 4.7 MB
EGAF00003441820 cram 4.5 MB
EGAF00003441821 cram 3.8 MB
EGAF00003441822 cram 4.2 MB
EGAF00003441823 cram 4.8 MB
EGAF00003441824 cram 3.9 MB
EGAF00003441825 cram 4.8 MB
EGAF00003441826 cram 4.2 MB
EGAF00003441827 cram 4.2 MB
EGAF00003441828 cram 4.3 MB
EGAF00003441829 cram 4.3 MB
EGAF00003441830 cram 5.2 MB
EGAF00003441831 cram 4.6 MB
EGAF00003441832 cram 4.2 MB
EGAF00003441833 cram 3.9 MB
EGAF00003441834 cram 3.7 MB
EGAF00003441835 cram 4.8 MB
EGAF00003441836 cram 3.8 MB
EGAF00003441837 cram 3.7 MB
EGAF00003441838 cram 4.4 MB
EGAF00003441868 cram 3.9 MB
EGAF00003441869 cram 4.2 MB
EGAF00003441870 cram 3.7 MB
EGAF00003441871 cram 3.9 MB
EGAF00003441872 cram 4.1 MB
EGAF00003441873 cram 4.6 MB
EGAF00003441874 cram 4.3 MB
EGAF00003441875 cram 4.0 MB
EGAF00003441876 cram 4.2 MB
EGAF00003441877 cram 4.4 MB
EGAF00003441878 cram 4.8 MB
EGAF00003441879 cram 4.4 MB
EGAF00003441880 cram 4.2 MB
EGAF00003441881 cram 4.3 MB
EGAF00003441882 cram 4.9 MB
EGAF00003441883 cram 4.5 MB
EGAF00003441884 cram 4.5 MB
EGAF00003441885 cram 4.0 MB
EGAF00003441886 cram 4.3 MB
EGAF00003441887 cram 4.4 MB
EGAF00003441888 cram 4.4 MB
EGAF00003441889 cram 4.5 MB
EGAF00003441890 cram 4.1 MB
EGAF00003441891 cram 4.4 MB
EGAF00003441892 cram 4.1 MB
EGAF00003441893 cram 3.8 MB
EGAF00003441894 cram 4.2 MB
EGAF00003441895 cram 4.0 MB
EGAF00003441896 cram 4.5 MB
EGAF00003441926 cram 4.0 MB
EGAF00003441927 cram 4.5 MB
EGAF00003441928 cram 4.0 MB
EGAF00003441929 cram 4.1 MB
EGAF00003441930 cram 4.5 MB
EGAF00003441931 cram 4.5 MB
EGAF00003441932 cram 3.8 MB
EGAF00003441933 cram 5.3 MB
EGAF00003441934 cram 4.6 MB
EGAF00003441935 cram 4.7 MB
EGAF00003441936 cram 3.9 MB
EGAF00003441937 cram 3.9 MB
EGAF00003441938 cram 3.8 MB
EGAF00003441939 cram 3.9 MB
EGAF00003441940 cram 4.2 MB
EGAF00003441941 cram 4.4 MB
EGAF00003441942 cram 4.2 MB
EGAF00003441943 cram 3.8 MB
EGAF00003441944 cram 2.9 MB
EGAF00003441945 cram 4.0 MB
EGAF00003441946 cram 4.1 MB
EGAF00003441947 cram 3.8 MB
EGAF00003441948 cram 4.0 MB
EGAF00003441949 cram 4.7 MB
EGAF00003441950 cram 4.3 MB
EGAF00003441951 cram 3.8 MB
EGAF00003441952 cram 4.1 MB
EGAF00003441953 cram 3.6 MB
EGAF00003441954 cram 3.7 MB
EGAF00003441980 cram 3.4 MB
EGAF00003441981 cram 3.8 MB
EGAF00003441982 cram 4.6 MB
EGAF00003441983 cram 3.9 MB
EGAF00003441984 cram 3.6 MB
EGAF00003441985 cram 4.4 MB
EGAF00003441986 cram 3.3 MB
EGAF00003441987 cram 3.7 MB
EGAF00003441988 cram 3.8 MB
EGAF00003441989 cram 3.7 MB
EGAF00003441990 cram 4.3 MB
EGAF00003441991 cram 3.9 MB
EGAF00003441992 cram 4.4 MB
EGAF00003441993 cram 3.8 MB
EGAF00003441994 cram 4.0 MB
EGAF00003441995 cram 4.2 MB
EGAF00003441996 cram 4.2 MB
EGAF00003441997 cram 4.0 MB
EGAF00003441998 cram 4.7 MB
EGAF00003441999 cram 4.4 MB
EGAF00003442000 cram 4.1 MB
EGAF00003442001 cram 4.3 MB
EGAF00003442002 cram 4.1 MB
EGAF00003442003 cram 3.7 MB
EGAF00003442004 cram 4.2 MB
EGAF00003442005 cram 3.6 MB
EGAF00003442006 cram 3.7 MB
EGAF00003442007 cram 3.9 MB
EGAF00003442008 cram 4.1 MB
EGAF00003442009 cram 4.8 MB
EGAF00003442010 cram 4.0 MB
EGAF00003442011 cram 4.9 MB
EGAF00003442012 cram 3.5 MB
EGAF00003442013 cram 4.0 MB
EGAF00003442014 cram 4.5 MB
EGAF00003442015 cram 3.7 MB
EGAF00003442016 cram 3.7 MB
EGAF00003442017 cram 3.7 MB
EGAF00003442018 cram 4.0 MB
EGAF00003442019 cram 4.2 MB
EGAF00003442020 cram 3.7 MB
EGAF00003442021 cram 3.8 MB
EGAF00003442022 cram 3.9 MB
EGAF00003442023 cram 4.5 MB
EGAF00003442024 cram 4.1 MB
EGAF00003442025 cram 4.1 MB
EGAF00003442026 cram 4.1 MB
EGAF00003442027 cram 4.2 MB
EGAF00003442028 cram 4.6 MB
EGAF00003442029 cram 4.2 MB
EGAF00003442030 cram 4.7 MB
EGAF00003442031 cram 4.0 MB
EGAF00003442032 cram 4.6 MB
EGAF00003442033 cram 4.4 MB
EGAF00003442034 cram 4.4 MB
EGAF00003442035 cram 3.7 MB
EGAF00003442036 cram 3.7 MB
EGAF00003442037 cram 3.7 MB
EGAF00003442038 cram 3.8 MB
EGAF00003442039 cram 4.1 MB
EGAF00003442040 cram 4.1 MB
EGAF00003442041 cram 4.1 MB
EGAF00003442042 cram 3.9 MB
EGAF00003442043 cram 3.7 MB
EGAF00003442044 cram 3.9 MB
EGAF00003442045 cram 4.0 MB
EGAF00003442046 cram 4.3 MB
EGAF00003442047 cram 3.8 MB
EGAF00003442048 cram 4.2 MB
EGAF00003442049 cram 4.4 MB
EGAF00003442050 cram 4.0 MB
EGAF00003442051 cram 4.2 MB
EGAF00003442052 cram 3.5 MB
EGAF00003442053 cram 3.9 MB
EGAF00003442054 cram 4.2 MB
EGAF00003442055 cram 4.3 MB
EGAF00003442056 cram 4.6 MB
EGAF00003442057 cram 4.2 MB
EGAF00003442058 cram 3.8 MB
EGAF00003442059 cram 4.0 MB
EGAF00003442060 cram 4.1 MB
EGAF00003442061 cram 4.0 MB
EGAF00003442062 cram 4.1 MB
EGAF00003442063 cram 3.5 MB
EGAF00003442064 cram 3.6 MB
EGAF00003442065 cram 3.7 MB
EGAF00003442066 cram 3.5 MB
EGAF00003442067 cram 3.7 MB
EGAF00003442068 cram 3.8 MB
EGAF00003442069 cram 4.1 MB
EGAF00003442070 cram 4.6 MB
EGAF00003442071 cram 4.0 MB
EGAF00003442072 cram 3.6 MB
EGAF00003442073 cram 4.0 MB
EGAF00003442074 cram 3.6 MB
EGAF00003442075 cram 3.7 MB
EGAF00003442076 cram 3.5 MB
EGAF00003442077 cram 3.8 MB
EGAF00003442078 cram 4.4 MB
EGAF00003442079 cram 3.6 MB
EGAF00003442080 cram 3.4 MB
EGAF00003442081 cram 3.9 MB
EGAF00003442082 cram 3.3 MB
EGAF00003442083 cram 4.2 MB
EGAF00003442084 cram 3.6 MB
EGAF00003442085 cram 3.7 MB
EGAF00003442086 cram 4.3 MB
EGAF00003442087 cram 4.0 MB
EGAF00003442088 cram 3.7 MB
EGAF00003442089 cram 3.7 MB
EGAF00003442090 cram 3.7 MB
EGAF00003442091 cram 3.9 MB
EGAF00003442092 cram 4.6 MB
EGAF00003442093 cram 3.9 MB
EGAF00003442094 cram 5.1 MB
EGAF00003442095 cram 4.1 MB
EGAF00003442096 cram 3.7 MB
EGAF00003442097 cram 4.2 MB
EGAF00003442098 cram 3.9 MB
EGAF00003442099 cram 4.0 MB
EGAF00003442100 cram 4.1 MB
EGAF00003442101 cram 4.2 MB
EGAF00003442102 cram 4.9 MB
EGAF00003442103 cram 4.0 MB
EGAF00003442104 cram 4.0 MB
EGAF00003442105 cram 4.6 MB
EGAF00003442106 cram 4.0 MB
EGAF00003442107 cram 4.4 MB
EGAF00003442108 cram 3.7 MB
EGAF00003442109 cram 3.5 MB
EGAF00003442110 cram 4.9 MB
EGAF00003442111 cram 3.6 MB
EGAF00003442112 cram 3.5 MB
EGAF00003442113 cram 3.7 MB
EGAF00003442114 cram 3.7 MB
EGAF00003442115 cram 3.7 MB
EGAF00003442116 cram 3.6 MB
EGAF00003442117 cram 3.9 MB
EGAF00003442118 cram 4.6 MB
EGAF00003442119 cram 4.3 MB
EGAF00003442120 cram 3.8 MB
EGAF00003442121 cram 3.5 MB
EGAF00003442122 cram 4.2 MB
EGAF00003442123 cram 4.2 MB
EGAF00003442124 cram 4.6 MB
EGAF00003442131 cram 4.6 MB
EGAF00003442132 cram 4.8 MB
EGAF00003442133 cram 3.8 MB
EGAF00003442134 cram 4.6 MB
EGAF00003442135 cram 4.0 MB
EGAF00003442136 cram 4.6 MB
EGAF00003442137 cram 4.3 MB
EGAF00003442138 cram 4.0 MB
EGAF00003442139 cram 4.2 MB
EGAF00003442140 cram 5.1 MB
EGAF00003442141 cram 3.9 MB
EGAF00003442142 cram 3.8 MB
EGAF00003442143 cram 3.6 MB
EGAF00003442144 cram 3.7 MB
EGAF00003442145 cram 4.0 MB
EGAF00003442146 cram 3.7 MB
EGAF00003442147 cram 4.0 MB
EGAF00003442148 cram 5.4 MB
EGAF00003442149 cram 3.9 MB
EGAF00003442150 cram 4.2 MB
EGAF00003442151 cram 4.0 MB
EGAF00003442152 cram 4.0 MB
EGAF00003442153 cram 4.3 MB
EGAF00003442154 cram 4.7 MB
EGAF00003442155 cram 3.9 MB
EGAF00003442156 cram 5.2 MB
EGAF00003442157 cram 4.6 MB
EGAF00003442158 cram 4.3 MB
EGAF00003442159 cram 3.9 MB
EGAF00004950542 cram 15.9 MB
EGAF00004950543 cram 15.3 MB
EGAF00004950544 cram 16.5 MB
EGAF00004950545 cram 14.8 MB
EGAF00004950546 cram 16.4 MB
EGAF00004950547 cram 15.0 MB
EGAF00004950548 cram 15.2 MB
EGAF00004950549 cram 15.7 MB
EGAF00004950550 cram 15.2 MB
EGAF00004950551 cram 14.0 MB
EGAF00004950552 cram 13.6 MB
EGAF00004950553 cram 13.9 MB
EGAF00004950554 cram 14.4 MB
EGAF00004950555 cram 13.6 MB
EGAF00004950556 cram 14.7 MB
EGAF00004950557 cram 17.6 MB
EGAF00004950558 cram 14.3 MB
EGAF00004950559 cram 15.0 MB
EGAF00004950560 cram 14.7 MB
EGAF00004950561 cram 12.3 MB
EGAF00004950562 cram 13.4 MB
EGAF00004950563 cram 12.8 MB
EGAF00004950564 cram 16.0 MB
EGAF00004950565 cram 15.1 MB
EGAF00004950566 cram 13.4 MB
EGAF00004950567 cram 14.9 MB
EGAF00004950568 cram 13.5 MB
EGAF00004950569 cram 13.7 MB
EGAF00004950570 cram 15.3 MB
EGAF00004950571 cram 15.8 MB
EGAF00004950572 cram 15.0 MB
EGAF00004950573 cram 14.7 MB
EGAF00004950574 cram 13.5 MB
EGAF00004950575 cram 14.2 MB
EGAF00004950576 cram 14.3 MB
EGAF00004950577 cram 13.3 MB
EGAF00004950578 cram 12.5 MB
EGAF00004950579 cram 14.1 MB
EGAF00004950580 cram 11.6 MB
EGAF00004950581 cram 13.0 MB
EGAF00004950582 cram 14.2 MB
EGAF00004950583 cram 13.3 MB
EGAF00004950584 cram 15.2 MB
EGAF00004950585 cram 15.4 MB
EGAF00004950586 cram 14.5 MB
EGAF00004950587 cram 13.0 MB
EGAF00004950588 cram 12.8 MB
EGAF00004950589 cram 15.4 MB
EGAF00004950590 cram 13.0 MB
EGAF00004950591 cram 14.7 MB
EGAF00004950592 cram 14.0 MB
EGAF00004950593 cram 14.7 MB
EGAF00004950594 cram 13.6 MB
EGAF00004950595 cram 14.2 MB
EGAF00004950596 cram 14.5 MB
EGAF00004950597 cram 14.7 MB
EGAF00004950598 cram 14.8 MB
EGAF00004950599 cram 15.3 MB
EGAF00004950600 cram 13.2 MB
EGAF00004950601 cram 15.3 MB
EGAF00004950602 cram 15.1 MB
EGAF00004950603 cram 16.2 MB
EGAF00004950604 cram 15.6 MB
EGAF00004950605 cram 15.9 MB
EGAF00004950606 cram 14.5 MB
EGAF00004950607 cram 14.9 MB
EGAF00004950608 cram 14.7 MB
EGAF00004950609 cram 13.6 MB
EGAF00004950610 cram 15.0 MB
EGAF00004950611 cram 15.6 MB
EGAF00004950612 cram 13.9 MB
EGAF00004950613 cram 14.3 MB
EGAF00004950614 cram 15.1 MB
EGAF00004950615 cram 14.7 MB
EGAF00004950616 cram 13.9 MB
EGAF00004950617 cram 14.8 MB
EGAF00004950618 cram 13.2 MB
EGAF00004950619 cram 13.6 MB
EGAF00004950620 cram 15.5 MB
EGAF00004950621 cram 16.1 MB
EGAF00004950622 cram 14.6 MB
EGAF00004950623 cram 14.5 MB
EGAF00004950624 cram 14.9 MB
EGAF00004950625 cram 14.9 MB
EGAF00004950626 cram 14.2 MB
EGAF00004950627 cram 14.6 MB
EGAF00004950628 cram 14.6 MB
EGAF00004950629 cram 15.0 MB
EGAF00004950630 cram 15.6 MB
EGAF00004950631 cram 16.6 MB
EGAF00004950632 cram 15.3 MB
EGAF00004950633 cram 14.2 MB
EGAF00004950634 cram 14.6 MB
EGAF00004950635 cram 15.6 MB
EGAF00004950636 cram 15.4 MB
EGAF00004950637 cram 16.9 MB
480 Files (3.0 GB)