Transcriptome sequencing of replication repair deficient brain cancers

Hypermutant tumors which harbor many somatic mutations may obscure the interpretation of targetable genomic events. This dataset contains transcriptome sequencing from 21 replication repair deficient brain tumor samples as well as healthy controls.

30 samples
DAC: EGAC00001001936
Technology: Illumina HiSeq 2500

Access Policy1 Study Files

Metadata

Request Access

RS DUO:0000012 (version: 2019-01-07)research specific restrictionsThis data use modifier indicates that use is limited to studies of a certain research type.
NPUNCU DUO:0000018 (version: 2019-01-07)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
IRB DUO:0000021 (version: 2019-01-07)ethics approval requiredThis data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

RRD dataset access policy

If you need to request access to this data set, please contact: Uri Tabori, Email: uri.tabori@sickkids.ca

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001005008	Mutations in the RAS/MAPK pathway drive replication repair deficient hypermutated tumors and confer sensitivity to MEK inhibition	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00004980195	fastq.gz	12.1 GB
EGAF00004980196	fastq.gz	12.2 GB
EGAF00004980197	fastq.gz	11.7 GB
EGAF00004980198	fastq.gz	11.8 GB
EGAF00004980199	fastq.gz	11.0 GB
EGAF00004980200	fastq.gz	11.4 GB
EGAF00004980201	fastq.gz	10.3 GB
EGAF00004980202	fastq.gz	10.3 GB
EGAF00004980203	fastq.gz	11.6 GB
EGAF00004980204	fastq.gz	11.7 GB
EGAF00004980205	fastq.gz	10.8 GB
EGAF00004980206	fastq.gz	11.1 GB
EGAF00004980207	fastq.gz	10.5 GB
EGAF00004980208	fastq.gz	10.6 GB
EGAF00004980209	fastq.gz	10.3 GB
EGAF00004980210	fastq.gz	10.7 GB
EGAF00004980211	fastq.gz	10.5 GB
EGAF00004980212	fastq.gz	10.3 GB
EGAF00004980213	fastq.gz	11.0 GB
EGAF00004980214	fastq.gz	11.2 GB
EGAF00004980215	fastq.gz	24.1 GB
EGAF00004980216	fastq.gz	24.0 GB
EGAF00004980217	fq.gz	11.6 GB
EGAF00004980218	fq.gz	12.1 GB
EGAF00004980219	fastq.gz	12.1 GB
EGAF00004980220	fastq.gz	11.6 GB
EGAF00004980221	fq.gz	8.0 GB
EGAF00004980222	fq.gz	8.2 GB
EGAF00004980223	fq.gz	10.7 GB
EGAF00004980224	fq.gz	10.8 GB
EGAF00004980225	fq.gz	8.5 GB
EGAF00004980226	fq.gz	8.5 GB
EGAF00004980227	fq.gz	8.3 GB
EGAF00004980228	fq.gz	8.4 GB
EGAF00004980229	fq.gz	10.2 GB
EGAF00004980230	fq.gz	10.5 GB
EGAF00004980231	fastq.gz	23.0 GB
EGAF00004980232	fastq.gz	22.7 GB
EGAF00004980233	fastq.gz	11.6 GB
EGAF00004980234	fastq.gz	11.9 GB
EGAF00004980235	fastq.gz	22.2 GB
EGAF00004980236	fastq.gz	22.0 GB
EGAF00004980237	fastq.gz	10.7 GB
EGAF00004980238	fastq.gz	11.1 GB
EGAF00004980239	fq.gz	12.2 GB
EGAF00004980240	fq.gz	12.4 GB
EGAF00004980241	fastq.gz	10.8 GB
EGAF00004980242	fastq.gz	11.2 GB
EGAF00004980243	fq.gz	10.8 GB
EGAF00004980244	fq.gz	11.1 GB
EGAF00004980245	fq.gz	13.2 GB
EGAF00004980246	fq.gz	13.5 GB
EGAF00004980247	fastq.gz	10.6 GB
EGAF00004980248	fastq.gz	10.6 GB
EGAF00004980249	fastq.gz	22.7 GB
EGAF00004980250	fastq.gz	22.8 GB
EGAF00004980251	fastq.gz	11.1 GB
EGAF00004980252	fastq.gz	11.4 GB
EGAF00004980253	fastq.gz	19.0 GB
EGAF00004980254	fastq.gz	18.8 GB
60 Files (766.3 GB)