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PCCRC versus prevalent CRC

To analyse genome wide DNA copy number changes in combination with mutation status of CRC-related genes, CIMP and MSI, in order to explore the biology of PCCRCs. Formalin-fixed, paraffin-embedded samples from 122 PCCRCs and 98 prevalent CRCs collected in 3 different hospitals in the region of South Limburg, the Netherlands, were used in this study. DNA was extracted for molecular analysis. Labels have been updated.

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Data Access Policy of NKI-AvL TGO

Data Access Policy of NKI-AvL TGO To request access to this specific dataset, and in order to comply with local and (inter)national regulations, please follow the steps described below: 1. Please fill in the information requested on the website: ega.nki.nl 2. Once you’ve submitted this information, the Data Access Committee (DAC) and the NKI-AVL Internal Review Board (IRB) will review your planned study and its goals and judge whether it is competing with our interests. The DAC and IRB can approve or decline your request or request a modification. 3. Upon approval by the IRB, you will receive a Data Transfer Agreement (DTA) that needs to be filled in and signed by the legal representative of your institute / company. 4. Upon acceptance of a signed DTA by our Knowledge Transfer & Contracting Office (KT&C), your party will receive a copy signed by our legal representative, and you will need to submit your access request via the EGA website

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001004686 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005016152 bam 489.7 MB
EGAF00005016153 bam 710.5 MB
EGAF00005016154 bam 697.5 MB
EGAF00005016155 bam 497.0 MB
EGAF00005016156 bam 253.0 MB
EGAF00005016157 bam 436.4 MB
EGAF00005016158 bam 446.2 MB
EGAF00005016159 bam 493.6 MB
EGAF00005016160 bam 476.4 MB
EGAF00005016161 bam 436.2 MB
EGAF00005016162 bam 44.0 MB
EGAF00005016163 bam 459.6 MB
EGAF00005016164 bam 10.8 MB
EGAF00005016165 bam 472.4 MB
EGAF00005016166 bam 518.9 MB
EGAF00005016167 bam 381.9 MB
EGAF00005016168 bam 220.6 MB
EGAF00005016169 bam 4.6 GB
EGAF00005016170 bam 357.3 MB
EGAF00005016171 bam 552.4 MB
EGAF00005016172 bam 596.2 MB
EGAF00005016173 bam 444.1 MB
EGAF00005016174 bam 423.4 MB
EGAF00005016175 bam 445.8 MB
EGAF00005016176 bam 372.1 MB
EGAF00005016177 bam 566.7 MB
EGAF00005016178 bam 594.3 MB
EGAF00005016179 bam 544.3 MB
EGAF00005016180 bam 608.5 MB
EGAF00005016181 bam 408.8 MB
EGAF00005016182 bam 485.5 MB
EGAF00005016183 bam 273.2 MB
EGAF00005016184 bam 573.9 MB
EGAF00005016185 bam 503.0 MB
EGAF00005016186 bam 43.4 MB
EGAF00005016187 bam 502.2 MB
EGAF00005016188 bam 570.2 MB
EGAF00005016189 bam 588.7 MB
EGAF00005016190 bam 613.8 MB
EGAF00005016191 bam 577.5 MB
EGAF00005016192 bam 577.4 MB
EGAF00005016193 bam 552.4 MB
EGAF00005016194 bam 555.5 MB
EGAF00005016195 bam 776.3 MB
EGAF00005016196 bam 521.1 MB
EGAF00005016197 bam 475.4 MB
EGAF00005016198 bam 690.1 MB
EGAF00005016199 bam 433.2 MB
EGAF00005016200 bam 542.6 MB
EGAF00005016201 bam 721.9 MB
EGAF00005016202 bam 429.2 MB
EGAF00005016203 bam 508.9 MB
EGAF00005016204 bam 572.6 MB
EGAF00005016205 bam 505.5 MB
EGAF00005016206 bam 479.7 MB
EGAF00005016207 bam 493.2 MB
EGAF00005016208 bam 623.0 MB
EGAF00005016209 bam 538.2 MB
EGAF00005016210 bam 533.5 MB
EGAF00005016211 bam 533.3 MB
EGAF00005016212 bam 697.9 MB
EGAF00005016213 bam 766.6 MB
EGAF00005016214 bam 750.7 MB
EGAF00005016215 bam 552.3 MB
EGAF00005016216 bam 658.2 MB
EGAF00005016217 bam 593.5 MB
EGAF00005016218 bam 333.5 MB
EGAF00005016219 bam 416.1 MB
EGAF00005016220 bam 37.6 MB
EGAF00005016221 bam 539.0 MB
EGAF00005016222 bam 475.2 MB
EGAF00005016223 bam 844.7 MB
EGAF00005016224 bam 503.3 MB
EGAF00005016225 bam 240.4 MB
EGAF00005016226 bam 335.6 MB
EGAF00005016227 bam 381.0 MB
EGAF00005016228 bam 483.8 MB
EGAF00005016229 bam 263.8 MB
EGAF00005016230 bam 622.2 MB
EGAF00005016231 bam 576.7 MB
EGAF00005016232 bam 558.7 MB
EGAF00005016233 bam 212.9 MB
EGAF00005016234 bam 290.4 MB
EGAF00005016235 bam 424.3 MB
EGAF00005016236 bam 434.9 MB
EGAF00005016237 bam 399.3 MB
EGAF00005016238 bam 410.2 MB
EGAF00005016239 bam 557.1 MB
EGAF00005016240 bam 432.3 MB
EGAF00005016241 bam 68.0 MB
EGAF00005016242 bam 510.2 MB
EGAF00005016243 bam 67.0 MB
EGAF00005016244 bam 302.9 MB
EGAF00005016245 bam 416.4 MB
EGAF00005016246 bam 70.2 MB
EGAF00005016247 bam 585.3 MB
EGAF00005016248 bam 372.2 MB
EGAF00005016249 bam 337.5 MB
EGAF00005016250 bam 409.8 MB
EGAF00005016251 bam 555.7 MB
EGAF00005016252 bam 415.1 MB
EGAF00005016253 bam 232.5 MB
EGAF00005016254 bam 638.5 MB
EGAF00005016255 bam 400.5 MB
EGAF00005016256 bam 164.0 MB
EGAF00005016257 bam 10.2 MB
EGAF00005016258 bam 303.7 MB
EGAF00005016259 bam 451.6 MB
EGAF00005016260 bam 522.7 MB
EGAF00005016261 bam 360.0 MB
EGAF00005016262 bam 422.5 MB
EGAF00005016263 bam 46.9 MB
EGAF00005016264 bam 474.2 MB
EGAF00005016265 bam 450.4 MB
EGAF00005016266 bam 74.1 MB
EGAF00005016267 bam 51.8 MB
EGAF00005016268 bam 555.3 MB
EGAF00005016269 bam 72.1 MB
EGAF00005016270 bam 667.6 MB
EGAF00005016271 bam 549.1 MB
EGAF00005016272 bam 15.7 MB
EGAF00005016273 bam 501.1 MB
EGAF00005016274 bam 1.0 GB
EGAF00005016275 bam 472.1 MB
EGAF00005016276 bam 597.9 MB
EGAF00005016277 bam 505.2 MB
EGAF00005016278 bam 487.7 MB
EGAF00005016279 bam 541.2 MB
EGAF00005016280 bam 791.6 MB
EGAF00005016281 bam 548.5 MB
EGAF00005016282 bam 463.4 MB
EGAF00005016283 bam 45.2 MB
EGAF00005016284 bam 649.9 MB
EGAF00005016285 bam 578.6 MB
EGAF00005016286 bam 414.0 MB
EGAF00005016287 bam 423.4 MB
EGAF00005016288 bam 498.4 MB
EGAF00005016289 bam 364.3 MB
EGAF00005016290 bam 272.6 MB
EGAF00005016291 bam 706.8 MB
EGAF00005016292 bam 629.5 MB
EGAF00005016293 bam 661.3 MB
EGAF00005016294 bam 479.9 MB
EGAF00005016295 bam 39.8 MB
EGAF00005016296 bam 655.7 MB
EGAF00005016297 bam 638.6 MB
EGAF00005016298 bam 528.0 MB
EGAF00005016299 bam 440.3 MB
EGAF00005016300 bam 406.0 MB
EGAF00005016301 bam 13.3 MB
EGAF00005016302 bam 76.9 MB
EGAF00005016303 bam 361.1 MB
EGAF00005016304 bam 447.8 MB
EGAF00005016305 bam 425.0 MB
EGAF00005016306 bam 402.1 MB
EGAF00005016307 bam 25.4 MB
EGAF00005016308 bam 383.6 MB
EGAF00005016309 bam 606.6 MB
EGAF00005016310 bam 686.6 MB
EGAF00005016311 bam 650.3 MB
EGAF00005016312 bam 562.2 MB
EGAF00005016313 bam 1.3 GB
EGAF00005016314 bam 489.9 MB
EGAF00005016315 bam 462.3 MB
EGAF00005016316 bam 432.6 MB
EGAF00005016317 bam 495.7 MB
EGAF00005016318 bam 513.4 MB
EGAF00005016319 bam 591.3 MB
EGAF00005016320 bam 511.4 MB
EGAF00005016321 bam 543.2 MB
EGAF00005016322 bam 354.3 MB
EGAF00005016323 bam 331.1 MB
EGAF00005016324 bam 697.5 MB
EGAF00005016325 bam 538.8 MB
EGAF00005016326 bam 467.7 MB
EGAF00005016327 bam 391.6 MB
EGAF00005016328 bam 21.3 MB
EGAF00005016329 bam 450.5 MB
EGAF00005016330 bam 367.1 MB
EGAF00005016331 bam 461.4 MB
EGAF00005016332 bam 795.6 MB
EGAF00005016333 bam 291.9 MB
EGAF00005016334 bam 530.6 MB
EGAF00005016335 bam 578.1 MB
EGAF00005016336 bam 633.4 MB
EGAF00005016337 bam 690.9 MB
EGAF00005016338 bam 459.5 MB
EGAF00005016339 bam 410.4 MB
EGAF00005016340 bam 330.0 MB
EGAF00005016341 bam 501.0 MB
EGAF00005016342 bam 527.3 MB
EGAF00005016343 bam 474.1 MB
EGAF00005016344 bam 497.1 MB
EGAF00005016345 bam 487.5 MB
EGAF00005016346 bam 509.5 MB
EGAF00005016347 bam 539.5 MB
EGAF00005016348 bam 1.6 GB
EGAF00005016349 bam 387.4 MB
EGAF00005016350 bam 572.8 MB
EGAF00005016351 bam 650.5 MB
EGAF00005016352 bam 498.1 MB
EGAF00005016353 bam 330.1 MB
EGAF00005016354 bam 527.9 MB
EGAF00005016355 bam 367.1 MB
EGAF00005016356 bam 509.5 MB
EGAF00005016357 bam 221.6 MB
EGAF00005016358 bam 12.0 MB
EGAF00005016359 bam 477.6 MB
EGAF00005016360 bam 475.4 MB
EGAF00005016361 bam 692.4 MB
EGAF00005016362 bam 1.1 GB
EGAF00005016363 bam 547.1 MB
EGAF00005016364 bam 58.2 MB
EGAF00005016365 bam 634.4 MB
EGAF00005016366 bam 478.3 MB
EGAF00005016367 bam 767.0 MB
EGAF00005016368 bam 34.2 MB
EGAF00005016369 bam 116.3 MB
EGAF00005016370 bam 464.9 MB
EGAF00005016371 bam 935.9 MB
EGAF00005016372 bam 410.9 MB
EGAF00005016373 bam 561.2 MB
EGAF00005016374 bam 514.5 MB
EGAF00005016375 bam 910.0 MB
EGAF00005016376 bam 438.8 MB
EGAF00005016377 bam 314.9 MB
EGAF00005016378 bam 352.4 MB
EGAF00005016379 bam 445.7 MB
EGAF00005016380 bam 579.2 MB
EGAF00005016381 bam 537.8 MB
EGAF00005016382 bam 574.8 MB
EGAF00005016383 bam 420.9 MB
EGAF00005016384 bam 709.5 MB
EGAF00005016385 bam 637.7 MB
EGAF00005016386 bam 494.4 MB
EGAF00005016387 bam 643.1 MB
EGAF00005016388 bam 484.3 MB
EGAF00005016389 bam 360.6 MB
EGAF00005016390 bam 519.2 MB
EGAF00005016391 bam 592.3 MB
EGAF00005016392 bam 427.7 MB
EGAF00005016393 bam 541.6 MB
EGAF00005016394 bam 39.8 MB
EGAF00005016395 bam 448.4 MB
EGAF00005016396 bam 538.1 MB
EGAF00005016397 bam 546.2 MB
EGAF00005016398 bam 502.1 MB
EGAF00005016399 bam 576.6 MB
EGAF00005016400 bam 519.4 MB
EGAF00005016401 bam 534.6 MB
EGAF00005016402 bam 759.5 MB
EGAF00005016403 bam 496.4 MB
EGAF00005016404 bam 808.7 MB
EGAF00005016405 bam 930.2 MB
EGAF00005016406 bam 517.5 MB
EGAF00005016407 bam 403.4 MB
EGAF00005016408 bam 465.4 MB
EGAF00005016409 bam 671.4 MB
EGAF00005016410 bam 239.9 MB
EGAF00005016411 bam 262.9 MB
EGAF00005016412 bam 1.0 GB
EGAF00005016413 bam 12.3 MB
EGAF00005016414 bam 494.3 MB
EGAF00005016415 bam 471.7 MB
EGAF00005016416 bam 718.3 MB
EGAF00005016417 bam 423.1 MB
EGAF00005016418 bam 637.0 MB
EGAF00005016419 bam 420.9 MB
EGAF00005016420 bam 543.0 MB
EGAF00005016421 bam 407.8 MB
EGAF00005016422 bam 441.5 MB
EGAF00005016423 bam 635.2 MB
EGAF00005016424 bam 497.5 MB
EGAF00005016425 bam 551.4 MB
EGAF00005016426 bam 618.2 MB
EGAF00005016427 bam 590.2 MB
EGAF00005016428 bam 147.5 MB
EGAF00005016429 bam 356.9 MB
EGAF00005016430 bam 37.8 MB
EGAF00005016431 bam 232.2 MB
EGAF00005016432 bam 225.0 MB
EGAF00005016433 bam 9.0 MB
EGAF00005016434 bam 471.7 MB
EGAF00005016435 bam 420.1 MB
EGAF00005016436 bam 221.5 MB
EGAF00005016437 bam 422.8 MB
EGAF00005016438 bam 579.1 MB
EGAF00005016439 bam 502.9 MB
EGAF00005016440 bam 178.9 MB
EGAF00005016441 bam 511.0 MB
EGAF00005016442 bam 554.1 MB
EGAF00005016443 bam 69.7 MB
EGAF00005016444 bam 355.8 MB
EGAF00005016445 bam 221.8 MB
EGAF00005016446 bam 76.5 MB
EGAF00005016447 bam 874.5 MB
EGAF00005016448 bam 591.1 MB
EGAF00005016449 bam 415.3 MB
EGAF00005016450 bam 560.3 MB
EGAF00005016451 bam 345.3 MB
EGAF00005016452 bam 647.8 MB
EGAF00005016453 bam 536.0 MB
EGAF00005016454 bam 70.5 MB
EGAF00005016455 bam 552.0 MB
EGAF00005016456 bam 492.6 MB
EGAF00005016457 bam 39.1 MB
EGAF00005016458 bam 216.7 MB
EGAF00005016459 bam 531.7 MB
EGAF00005016460 bam 462.9 MB
EGAF00005016461 bam 627.3 MB
EGAF00005016462 bam 416.8 MB
EGAF00005016463 bam 418.9 MB
EGAF00005016464 bam 516.3 MB
EGAF00005016465 bam 420.1 MB
EGAF00005016466 bam 413.6 MB
EGAF00005016467 bam 527.7 MB
EGAF00005016468 bam 507.2 MB
EGAF00005016469 bam 553.7 MB
EGAF00005016470 bam 596.6 MB
EGAF00005016471 bam 478.7 MB
EGAF00005016472 bam 431.0 MB
EGAF00005016473 bam 453.7 MB
EGAF00005016474 bam 568.7 MB
EGAF00005016475 bam 581.0 MB
EGAF00005016476 bam 49.8 MB
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EGAF00005016478 bam 667.1 MB
EGAF00005016479 bam 499.4 MB
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EGAF00005016481 bam 616.2 MB
EGAF00005016482 bam 383.4 MB
EGAF00005016483 bam 451.9 MB
EGAF00005016484 bam 501.8 MB
EGAF00005016485 bam 600.0 MB
EGAF00005016486 bam 551.1 MB
EGAF00005016487 bam 605.4 MB
EGAF00005016488 bam 458.8 MB
EGAF00005016489 bam 410.1 MB
EGAF00005016490 bam 565.5 MB
EGAF00005016491 bam 452.9 MB
EGAF00005016492 bam 485.4 MB
EGAF00005016493 bam 547.2 MB
EGAF00005016494 bam 780.5 MB
EGAF00005016495 bam 583.1 MB
EGAF00005016496 bam 630.0 MB
EGAF00005016497 bam 484.5 MB
EGAF00005016498 bam 945.0 MB
EGAF00005016499 bam 669.1 MB
EGAF00005016500 bam 142.4 MB
EGAF00005016501 bam 395.4 MB
EGAF00005016502 bam 677.1 MB
EGAF00005016503 bam 647.7 MB
EGAF00005016504 bam 807.7 MB
EGAF00005016505 bam 568.1 MB
EGAF00005016506 bam 541.7 MB
EGAF00005016507 bam 514.7 MB
EGAF00005016508 bam 853.1 MB
EGAF00005016509 bam 650.6 MB
EGAF00005016510 bam 609.5 MB
EGAF00005016511 bam 433.8 MB
EGAF00005016512 bam 855.0 MB
EGAF00005016513 bam 454.9 MB
EGAF00005016514 bam 471.6 MB
EGAF00005016515 bam 410.6 MB
364 Files (177.6 GB)