Early breast cancer (WGS)

Low-coverage whole genome sequencing of 29 early breast cancer samples.

16/03/2021
29 samples
DAC: EGAC00001001808
Technology: Illumina HiSeq 4000

Access Policy1 Study Files

Metadata

Request Access

HMB DUO:0000006 (version: 2019-01-07)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
NPUNCU DUO:0000018 (version: 2019-01-07)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

VIB Policy for Data Access and Data Transfer

VIB Policy for Data Access and Data Transfer Applicability This policy applies to the access to and transfer of VIB research datasets that contain non-anonymous Personal Data which are subject to the provisions of the General Data Protection Regulation (EU) 2016/679. Access/transfer conditions - The access/transfer is subject to approval by the VIB Data Access Committee. - The proposed research purpose should not be incompatible with the primary research purpose for which the data were originally generated. - The Recipient shall have in place adequate safeguards for the protection of Personal Data. - Access is subject to a Data Transfer/Access Agreement which will be managed by VIB Innovation & Business. - The Data Transfer/Access will be limited to the Data that are necessary for the proposed research. Access/transfer procedure - Requests to access or obtain non-anonymous datasets should be submitted to the responsible corresponding author that has uploaded the dataset into the repository, and with a copy to dac@vib.be. - The request should contain the following information: o Name, affiliation (legal entity) and contact information of the requesting recipient party. o Reference to the specific dataset(s) for which access or transfer is requested. o Description of the research purpose for which the data will be used. - The VIB Data Access Committee takes decisions to approve access/transfer within 14 days upon receipt of the request. - Data access will be given / Data will be transferred after completion of the Data Transfer/Access Agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001004809	BIOKEY: A single-cell catalogue of the dynamic changes underlying Checkpoint Immunotherapy response in Early Breast Cancer	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00005097069	fastq.gz	71.6 MB
EGAF00005097070	fastq.gz	477.8 MB
EGAF00005097071	fastq.gz	102.2 MB
EGAF00005097072	fastq.gz	522.2 MB
EGAF00005097073	fastq.gz	492.2 MB
EGAF00005097074	fastq.gz	77.0 MB
EGAF00005097075	fastq.gz	53.4 MB
EGAF00005097076	fastq.gz	391.9 MB
EGAF00005097077	fastq.gz	460.0 MB
EGAF00005097078	fastq.gz	94.2 MB
EGAF00005097079	fastq.gz	449.1 MB
EGAF00005097080	fastq.gz	101.6 MB
EGAF00005097081	fastq.gz	502.1 MB
EGAF00005097082	fastq.gz	443.5 MB
EGAF00005097083	fastq.gz	633.8 MB
EGAF00005097084	fastq.gz	85.4 MB
EGAF00005097085	fastq.gz	99.1 MB
EGAF00005097086	fastq.gz	70.6 MB
EGAF00005097087	fastq.gz	68.4 MB
EGAF00005097088	fastq.gz	64.6 MB
EGAF00005097089	fastq.gz	306.9 MB
EGAF00005097090	fastq.gz	92.1 MB
EGAF00005097091	fastq.gz	289.0 MB
EGAF00005097092	fastq.gz	70.8 MB
EGAF00005097093	fastq.gz	580.6 MB
EGAF00005097094	fastq.gz	280.5 MB
EGAF00005097095	fastq.gz	416.1 MB
EGAF00005097096	fastq.gz	113.9 MB
EGAF00005097097	fastq.gz	372.1 MB
EGAF00005097098	fastq.gz	373.8 MB
EGAF00005097099	fastq.gz	283.2 MB
EGAF00005097100	fastq.gz	74.3 MB
EGAF00005097101	fastq.gz	85.9 MB
EGAF00005097102	fastq.gz	84.9 MB
EGAF00005097103	fastq.gz	373.8 MB
EGAF00005097104	fastq.gz	79.0 MB
EGAF00005097105	fastq.gz	527.5 MB
EGAF00005097106	fastq.gz	70.0 MB
EGAF00005097107	fastq.gz	84.4 MB
EGAF00005097108	fastq.gz	440.6 MB
EGAF00005097109	fastq.gz	75.4 MB
EGAF00005097110	fastq.gz	78.6 MB
EGAF00005097111	fastq.gz	419.7 MB
EGAF00005097112	fastq.gz	52.6 MB
EGAF00005097113	fastq.gz	393.2 MB
EGAF00005097114	fastq.gz	410.1 MB
EGAF00005097115	fastq.gz	367.8 MB
EGAF00005097116	fastq.gz	56.3 MB
EGAF00005097117	fastq.gz	78.6 MB
EGAF00005097118	fastq.gz	494.5 MB
EGAF00005097119	fastq.gz	83.9 MB
EGAF00005097120	fastq.gz	410.2 MB
EGAF00005097121	fastq.gz	91.8 MB
EGAF00005097122	fastq.gz	59.2 MB
EGAF00005097123	fastq.gz	81.3 MB
EGAF00005097124	fastq.gz	407.5 MB
EGAF00005097125	fastq.gz	467.1 MB
EGAF00005097126	fastq.gz	381.7 MB
58 Files (14.7 GB)