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Dataset

RData

Dataset ID	Technology	Samples
EGAD00001007585	N/A	1651

Dataset Description

The file data.RData contains data objects needed to run the .rmd template that generates the manuscript's figures. These include ExpressionSets for the training and test sets, module content and annotations, PCA results, the lasso58 signature with coefficients, and Foundation Medicine CDKN2A copy-number alteration data.

Data Use Conditions

NMDS NPU TS US PS IS

See further information on Data Use Conditions

Label	Code	Version
no general methods research	DUO:0000015	2019-01-07
not for profit, non commercial use only	DUO:0000018	2019-01-07
time limit on use	DUO:0000025	2019-01-07
user specific restriction	DUO:0000026	2019-01-07
project specific restriction	DUO:0000027	2019-01-07
institution specific restriction	DUO:0000028	2019-01-07

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

Cross-indication DAC
Contact person: Romain Banchereau
Email: devsci-dac-d [at] gene [dot] com
More details: EGAC00001001748

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This dataset is featured in 1 study

Studies are experimental investigations of a particular phenomenon. e.g. case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients. Click on one of the Study IDs below to find out more.

Study ID	Study Title	Study Type
EGAS00001004343	Molecular determinants of response to PD-L1 blockade across tumor types	Other

EGA Beacon