About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
Need Help?

Alloreactive T-cell receptor (TCR) repertoire in kidney transplantation

We analyzed the T-cell receptor (TCR) repertoires from twelve kidney transplant recipients. Six out of the twelve kidney transplant recipients experienced a cellular rejection after kidney transplantation. TCR repertoires of CD4+ and CD8+ positive T-cells were assessed prior to transplantation and after transplantation at time of allograft biopsy using RNA based T-cell receptor beta next generation sequencing (NGS). In addition, the pre-formed alloreactive TCR repertoire for each kidney transplant recipient was identified using mixed lymphocyte reaction and donor reactive T-cells were subjected to TCR beta sequencing. In two out of the six patients with cellular rejection the TCR repertoire of graft infiltrating T-cells was additionally captured. This dataset comprises a total of 98 samples. NGS TCR beta libraries of all samples were sequenced on an Illumina NextSeq 500 and raw sequencing data (in the form of fastq files) as well assembled clonotypes and their counts (in the form of clonotype tables) are provided.

Request Access

Data Access Policy for genetic and phenotypic Data from biomedical research projects.

Any user seeking access to genetic and phenotypic Data from biomedical research projects must complete a Data Access Agreement. The Project in which the data will be used must be described in the Data Access Agreement and you agree to only use the Data for the purpose of the Project. Depending on type and area of research additional institutional review board approval may be necessary.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005299 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00005298853 fastq.gz 286.8 MB Report
EGAF00005298854 fastq.gz 460.1 MB Report
EGAF00005298855 fastq.gz 500.2 MB Report
EGAF00005298856 fastq.gz 736.5 MB Report
EGAF00005298857 fastq.gz 491.7 MB Report
EGAF00005298858 fastq.gz 740.8 MB Report
EGAF00005298859 fastq.gz 369.1 MB Report
EGAF00005298860 fastq.gz 512.7 MB Report
EGAF00005298861 fastq.gz 1.9 kB Report
EGAF00005298862 fastq.gz 2.5 kB Report
EGAF00005298863 fastq.gz 360.8 MB Report
EGAF00005298864 fastq.gz 531.5 MB Report
EGAF00005298865 fastq.gz 482.1 MB Report
EGAF00005298866 fastq.gz 683.5 MB Report
EGAF00005298867 fastq.gz 460.2 MB Report
EGAF00005298868 fastq.gz 619.5 MB Report
EGAF00005298869 fastq.gz 389.3 MB Report
EGAF00005298870 fastq.gz 587.9 MB Report
EGAF00005298871 fastq.gz 583.3 MB Report
EGAF00005298872 fastq.gz 814.4 MB Report
EGAF00005298873 fastq.gz 414.4 MB Report
EGAF00005298874 fastq.gz 639.9 MB Report
EGAF00005298875 fastq.gz 979.1 MB Report
EGAF00005298876 fastq.gz 1.5 GB Report
EGAF00005298877 fastq.gz 324.4 MB Report
EGAF00005298878 fastq.gz 485.6 MB Report
EGAF00005298879 fastq.gz 27.4 MB Report
EGAF00005298880 fastq.gz 37.6 MB Report
EGAF00005298881 fastq.gz 342.6 MB Report
EGAF00005298882 fastq.gz 511.1 MB Report
EGAF00005298883 fastq.gz 448.2 MB Report
EGAF00005298884 fastq.gz 744.4 MB Report
EGAF00005298885 fastq.gz 429.8 MB Report
EGAF00005298886 fastq.gz 636.7 MB Report
EGAF00005298887 fastq.gz 392.9 MB Report
EGAF00005298888 fastq.gz 648.8 MB Report
EGAF00005298889 fastq.gz 232.3 MB Report
EGAF00005298890 fastq.gz 340.2 MB Report
EGAF00005298891 fastq.gz 477.2 MB Report
EGAF00005298892 fastq.gz 759.7 MB Report
EGAF00005298893 fastq.gz 256.1 MB Report
EGAF00005298894 fastq.gz 360.4 MB Report
EGAF00005298895 fastq.gz 466.4 MB Report
EGAF00005298896 fastq.gz 710.2 MB Report
EGAF00005298897 fastq.gz 228.1 MB Report
EGAF00005298898 fastq.gz 366.5 MB Report
EGAF00005298899 fastq.gz 242.9 MB Report
EGAF00005298900 fastq.gz 376.0 MB Report
EGAF00005298901 fastq.gz 416.6 MB Report
EGAF00005298902 fastq.gz 667.7 MB Report
EGAF00005298903 fastq.gz 334.0 MB Report
EGAF00005298904 fastq.gz 442.1 MB Report
EGAF00005298905 fastq.gz 327.0 MB Report
EGAF00005298906 fastq.gz 468.1 MB Report
EGAF00005298907 fastq.gz 274.7 MB Report
EGAF00005298908 fastq.gz 407.8 MB Report
EGAF00005298909 fastq.gz 420.3 MB Report
EGAF00005298910 fastq.gz 583.2 MB Report
EGAF00005298911 fastq.gz 418.6 MB Report
EGAF00005298912 fastq.gz 641.0 MB Report
EGAF00005298913 fastq.gz 423.7 MB Report
EGAF00005298914 fastq.gz 660.3 MB Report
EGAF00005298915 fastq.gz 326.1 MB Report
EGAF00005298916 fastq.gz 482.5 MB Report
EGAF00005298917 fastq.gz 416.1 MB Report
EGAF00005298918 fastq.gz 633.2 MB Report
EGAF00005298919 fastq.gz 390.8 MB Report
EGAF00005298920 fastq.gz 594.9 MB Report
EGAF00005298921 fastq.gz 475.4 MB Report
EGAF00005298922 fastq.gz 735.5 MB Report
EGAF00005298923 fastq.gz 300.7 MB Report
EGAF00005298924 fastq.gz 433.6 MB Report
EGAF00005298925 fastq.gz 327.6 MB Report
EGAF00005298926 fastq.gz 474.8 MB Report
EGAF00005298927 fastq.gz 1.2 kB Report
EGAF00005298928 fastq.gz 1.5 kB Report
EGAF00005298929 fastq.gz 376.4 MB Report
EGAF00005298930 fastq.gz 522.3 MB Report
EGAF00005298931 fastq.gz 425.7 MB Report
EGAF00005298932 fastq.gz 678.3 MB Report
EGAF00005298933 fastq.gz 350.0 MB Report
EGAF00005298934 fastq.gz 526.7 MB Report
EGAF00005298935 fastq.gz 379.9 MB Report
EGAF00005298936 fastq.gz 604.5 MB Report
EGAF00005298937 fastq.gz 261.9 MB Report
EGAF00005298938 fastq.gz 405.5 MB Report
EGAF00005298939 fastq.gz 402.8 MB Report
EGAF00005298940 fastq.gz 565.0 MB Report
EGAF00005298941 fastq.gz 408.9 MB Report
EGAF00005298942 fastq.gz 607.4 MB Report
EGAF00005298943 fastq.gz 471.9 MB Report
EGAF00005298944 fastq.gz 730.8 MB Report
EGAF00005298945 fastq.gz 455.7 MB Report
EGAF00005298946 fastq.gz 676.9 MB Report
EGAF00005298947 fastq.gz 454.0 MB Report
EGAF00005298948 fastq.gz 698.1 MB Report
EGAF00005298949 fastq.gz 443.2 MB Report
EGAF00005298950 fastq.gz 709.7 MB Report
EGAF00005298951 fastq.gz 440.8 MB Report
EGAF00005298952 fastq.gz 687.6 MB Report
EGAF00005298953 fastq.gz 389.5 MB Report
EGAF00005298954 fastq.gz 622.9 MB Report
EGAF00005298955 fastq.gz 489.6 MB Report
EGAF00005298956 fastq.gz 761.2 MB Report
EGAF00005298957 fastq.gz 310.7 MB Report
EGAF00005298958 fastq.gz 470.0 MB Report
EGAF00005298959 fastq.gz 530.5 MB Report
EGAF00005298960 fastq.gz 792.9 MB Report
EGAF00005298961 fastq.gz 397.3 MB Report
EGAF00005298962 fastq.gz 596.2 MB Report
EGAF00005298963 fastq.gz 393.5 MB Report
EGAF00005298964 fastq.gz 590.2 MB Report
EGAF00005298965 fastq.gz 29.9 MB Report
EGAF00005298966 fastq.gz 40.8 MB Report
EGAF00005298967 fastq.gz 484.0 MB Report
EGAF00005298968 fastq.gz 676.1 MB Report
EGAF00005298969 fastq.gz 623.2 MB Report
EGAF00005298970 fastq.gz 959.6 MB Report
EGAF00005298971 fastq.gz 455.8 MB Report
EGAF00005298972 fastq.gz 720.7 MB Report
EGAF00005298973 fastq.gz 287.9 MB Report
EGAF00005298974 fastq.gz 383.1 MB Report
EGAF00005298975 fastq.gz 350.8 MB Report
EGAF00005298976 fastq.gz 502.9 MB Report
EGAF00005298977 fastq.gz 287.3 MB Report
EGAF00005298978 fastq.gz 458.5 MB Report
EGAF00005298979 fastq.gz 1.2 GB Report
EGAF00005298980 fastq.gz 1.7 GB Report
EGAF00005298981 fastq.gz 520.0 MB Report
EGAF00005298982 fastq.gz 726.7 MB Report
EGAF00005298983 fastq.gz 383.4 MB Report
EGAF00005298984 fastq.gz 547.5 MB Report
EGAF00005298985 fastq.gz 403.7 MB Report
EGAF00005298986 fastq.gz 647.9 MB Report
EGAF00005298987 fastq.gz 416.4 MB Report
EGAF00005298988 fastq.gz 635.4 MB Report
EGAF00005298989 fastq.gz 467.5 MB Report
EGAF00005298990 fastq.gz 686.7 MB Report
EGAF00005298991 fastq.gz 392.8 MB Report
EGAF00005298992 fastq.gz 562.9 MB Report
EGAF00005298993 fastq.gz 243.7 MB Report
EGAF00005298994 fastq.gz 362.0 MB Report
EGAF00005298995 fastq.gz 364.2 MB Report
EGAF00005298996 fastq.gz 534.5 MB Report
EGAF00005298997 fastq.gz 434.5 MB Report
EGAF00005298998 fastq.gz 597.1 MB Report
EGAF00005298999 fastq.gz 523.7 MB Report
EGAF00005299000 fastq.gz 762.8 MB Report
EGAF00005299001 fastq.gz 457.1 MB Report
EGAF00005299002 fastq.gz 660.5 MB Report
EGAF00005299003 fastq.gz 425.8 MB Report
EGAF00005299004 fastq.gz 691.0 MB Report
EGAF00005299005 fastq.gz 543.0 MB Report
EGAF00005299006 fastq.gz 818.2 MB Report
EGAF00005299007 fastq.gz 412.2 MB Report
EGAF00005299008 fastq.gz 623.9 MB Report
EGAF00005299009 fastq.gz 483.7 MB Report
EGAF00005299010 fastq.gz 757.4 MB Report
EGAF00005299011 fastq.gz 330.8 MB Report
EGAF00005299012 fastq.gz 472.0 MB Report
EGAF00005299013 fastq.gz 519.7 MB Report
EGAF00005299014 fastq.gz 875.4 MB Report
EGAF00005299015 fastq.gz 442.4 MB Report
EGAF00005299016 fastq.gz 678.2 MB Report
EGAF00005299017 fastq.gz 386.3 MB Report
EGAF00005299018 fastq.gz 607.7 MB Report
EGAF00005299019 fastq.gz 501.1 MB Report
EGAF00005299020 fastq.gz 787.8 MB Report
EGAF00005299021 fastq.gz 271.3 MB Report
EGAF00005299022 fastq.gz 422.7 MB Report
EGAF00005299023 fastq.gz 360.8 MB Report
EGAF00005299024 fastq.gz 553.1 MB Report
EGAF00005299025 fastq.gz 321.0 MB Report
EGAF00005299026 fastq.gz 500.1 MB Report
EGAF00005299027 fastq.gz 364.1 MB Report
EGAF00005299028 fastq.gz 583.1 MB Report
EGAF00005299029 fastq.gz 402.8 MB Report
EGAF00005299030 fastq.gz 646.9 MB Report
EGAF00005299031 fastq.gz 297.9 MB Report
EGAF00005299032 fastq.gz 467.4 MB Report
EGAF00005299033 fastq.gz 537.6 MB Report
EGAF00005299034 fastq.gz 789.6 MB Report
EGAF00005299035 fastq.gz 386.4 MB Report
EGAF00005299036 fastq.gz 564.5 MB Report
EGAF00005299037 fastq.gz 845.3 MB Report
EGAF00005299038 fastq.gz 1.3 GB Report
EGAF00005299039 fastq.gz 291.4 MB Report
EGAF00005299040 fastq.gz 447.3 MB Report
EGAF00005299041 fastq.gz 328.6 MB Report
EGAF00005299042 fastq.gz 526.7 MB Report
EGAF00005299043 fastq.gz 409.4 MB Report
EGAF00005299044 fastq.gz 639.4 MB Report
EGAF00005299045 fastq.gz 605.0 MB Report
EGAF00005299046 fastq.gz 844.2 MB Report
EGAF00005299047 fastq.gz 338.1 MB Report
EGAF00005299048 fastq.gz 530.8 MB Report
EGAF00005299049 txt 90.4 kB
EGAF00005299050 txt 1.8 MB
EGAF00005299051 txt 169.6 kB
EGAF00005299052 txt 6.9 MB
EGAF00005299053 txt 9.1 MB
EGAF00005299054 txt 5.5 MB
EGAF00005299055 txt 8.4 MB
EGAF00005299056 txt 436.2 kB
EGAF00005299057 txt 12.7 MB
EGAF00005299058 txt 10.3 MB
EGAF00005299059 txt 2.9 MB
EGAF00005299060 txt 7.0 MB
EGAF00005299061 txt 17.5 MB
EGAF00005299062 txt 4.7 MB
EGAF00005299063 txt 7.2 MB
EGAF00005299064 txt 1.9 MB
EGAF00005299065 txt 22.1 MB
EGAF00005299066 txt 1.5 MB
EGAF00005299067 txt 16.7 MB
EGAF00005299068 txt 4.2 MB
EGAF00005299069 txt 25.8 MB
EGAF00005299070 txt 21.3 MB
EGAF00005299071 txt 19.2 MB
EGAF00005299072 txt 15.4 MB
EGAF00005299073 txt 7.1 MB
EGAF00005299074 txt 3.4 MB
EGAF00005299075 txt 1.2 MB
EGAF00005299076 txt 9.7 MB
EGAF00005299077 txt 10.5 MB
EGAF00005299078 txt 2.4 MB
EGAF00005299079 txt 19.4 MB
EGAF00005299080 txt 8.3 MB
EGAF00005299081 txt 2.3 MB
EGAF00005299082 txt 20.7 MB
EGAF00005299083 txt 9.9 MB
EGAF00005299084 txt 10.1 MB
EGAF00005299085 txt 4.3 MB
EGAF00005299086 txt 271.3 kB
EGAF00005299087 txt 1.0 MB
EGAF00005299088 txt 1.3 MB
EGAF00005299089 txt 10.4 MB
EGAF00005299090 txt 5.9 MB
EGAF00005299091 txt 4.0 MB
EGAF00005299092 txt 16.1 MB
EGAF00005299093 txt 15.0 MB
EGAF00005299094 txt 182.4 kB
EGAF00005299095 txt 3.7 MB
EGAF00005299096 txt 3.2 MB
EGAF00005299097 txt 5.2 MB
EGAF00005299098 txt 9.3 MB
EGAF00005299099 txt 19.4 MB
EGAF00005299100 txt 11.8 MB
EGAF00005299101 txt 12.5 MB
EGAF00005299102 txt 2.6 MB
EGAF00005299103 txt 1.8 MB
EGAF00005299104 txt 413.8 kB
EGAF00005299105 txt 460.8 kB
EGAF00005299106 txt 21.4 MB
EGAF00005299107 txt 17.6 MB
EGAF00005299108 txt 20.3 MB
EGAF00005299109 txt 433 Bytes
EGAF00005299110 txt 1.9 MB
EGAF00005299111 txt 863.4 kB
EGAF00005299112 txt 933.9 kB
EGAF00005299113 txt 2.0 MB
EGAF00005299114 txt 169 Bytes
EGAF00005299115 txt 2.4 MB
EGAF00005299116 txt 1.0 MB
EGAF00005299117 txt 9.1 MB
EGAF00005299118 txt 3.7 MB
EGAF00005299119 txt 1.2 MB
EGAF00005299120 txt 931.4 kB
EGAF00005299121 txt 884.9 kB
EGAF00005299122 txt 1.1 MB
EGAF00005299123 txt 832.4 kB
EGAF00005299124 txt 885.1 kB
EGAF00005299125 txt 315.0 kB
EGAF00005299126 txt 243.2 kB
EGAF00005299127 txt 300.8 kB
EGAF00005299128 txt 250.1 kB
EGAF00005299129 txt 1.0 MB
EGAF00005299130 txt 14.0 MB
EGAF00005299131 txt 13.8 MB
EGAF00005299132 txt 1.0 MB
EGAF00005299133 txt 3.3 MB
EGAF00005299134 txt 3.5 MB
EGAF00005299135 txt 7.9 MB
EGAF00005299136 txt 1.5 MB
EGAF00005299137 txt 12.9 MB
EGAF00005299138 txt 9.0 MB
EGAF00005299139 txt 2.4 MB
EGAF00005299140 txt 416.1 kB
EGAF00005299141 txt 1.8 MB
EGAF00005299142 txt 788.2 kB
EGAF00005299143 txt 381.1 kB
EGAF00005299144 txt 9.1 MB
EGAF00005299145 txt 171.4 kB
EGAF00005299146 txt 331.3 kB
294 Files (99.7 GB)