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Multi-site tumor sampling highlights molecular intra-tumor heterogeneity in malignant pleural mesothelioma

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FunGeST - Functional Genomics from cancer research to personalized medicine

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets to which the Data Recipient has requested access. The Data Recipient agrees to be bound by these terms and conditions. Definitions GDPR: This DAA ensures that both parties comply with the Regulation (EU) 2016/679 of the European Parliament and of the Council, known as the General Data Protection Regulation (herein referred to as the ‘GDPR’). Data: Refers to managed controlled access datasets (the Data). Under this Agreement, the Data is pseudonymised. Data Access/Transfer: Refers to an Institution’s right to request access to the Data and retrieve it from the Data Controller’s Institution upon approval of this DAA by the corresponding Data Access Committee (DAC) within the Data Controller’s Institution. Data Handling: Refers to an Institution’s ability to analyse and manipulate the Data within its own computer network. Data Controller(s): The Institution responsible for data generation and pseudonymization. Data Subject: Refers to any individual who is the source of any Data covered by this Agreement. Data Recipient (‘You’): The Institution that requests access to the Data through this Agreement. Authorized Personnel: The individual(s) at the Institution requesting Access to the Data. Research Project: The Project for which You have requested Access to the Data. Publications: Refers, without limitation, to any and all articles published in print journals, electronic journals, reviews, books, posters, and other written and verbal presentations of Research that have been accepted by peer review. FunGeST: This Data Access Agreement (DAA) has been developed for the FunGeST functional genomics projects, with the Centre de Recherche des Cordeliers (CRC) in Paris, France serving as the Data Controller. Terms and Conditions 1. Data Usage: The Data Recipient agrees to use the Data only for the specified Research Project and for research purposes only, not for any profit-making activities. 2. Confidentiality and Data Protection: The Data Recipient commits to maintaining the confidentiality of all information and Data related to Data Subjects, and will neither use nor attempt to use the Data in a way that compromises or violates the confidentiality and privacy of Data Subjects. 3. Data Subject Identification: The Data Recipient will not attempt to identify Data Subjects. 4. Data Linking: The Data Recipient will not link or combine the Data with other information that could re-identify the Data Subjects, even if such information is formally accessible or freely available. 5. Usage Restrictions: The Data Recipient agrees to consider any usage restrictions stemming from consent, applicable laws, or internal policies of their institution. 6. IT Security Measures The Data Recipient agrees to follow an up-to-date IT policy that includes: (a) Logging and auditing access to the Data and the computer network. (b) Password protection and/or strong data encryption. (c) Virus and malware protection. (d) Secure backup procedures. (e) Access control. (f) Incident response. 7. Project Duration: The Data Recipient aknowledges that access to the Data is granted for the duration of the specified Research Project. Any use of the Data for a different project requires prior approval through a new agreement. 8. Intellectual Property: The Data Recipient acknowledges that this agreement does not transfer any intellectual property rights to the Data. The Data Recipient will not assert intellectual property claims over the Data or use intellectual property protections to restrict access or use of any portion of the Data. However, the Data Recipient may conduct additional research that enhances the value of the Data and may obtain intellectual property rights over resulting discoveries, provided that licensing policies align with OECD guidelines and do not impede further research. 9. Legal Responsibility: The Data Recipient acknowledges that the Data Controller bears no legal responsibility for the accuracy or completeness of the Data, and the Data Recipient accepts no liability for any indirect, consequential, or incidental damages or losses arising from the use of the Data. 10. Liability: The Data Recipient agrees to hold harmless the Data Subjects and Data Controllers against any and all liabilities, demands, damages, expenses, and losses arising from the use of the Data. This includes, but is not limited to, any legal claims or financial losses resulting from misuse, breach of confidentiality, or failure to comply with the terms and conditions set forth in this agreement. The Data Recipient acknowledges full responsibility for ensuring the security and proper use of the Data. 11. Publication and Acknowledgement: The Data Recipient agrees that any publications, presentations, or disclosures based on the Data must appropriately cite the Data source. All papers and outputs must include a citation according to the guidelines provided with respective EGAD dataset ID. A list of required citations and acknowledgements will be provided along with the dataset and must be adhered to in all relevant research outputs. (see Section III). 12. Personnel Compliance and Data Confidentiality: The Data Recipient agrees to restrict the use of the Data to their Institution, ensuring that all Authorized Personnel are fully informed of and comply with the terms of this agreement. The Data Recipient will not disclose any information contained in the Data to third parties unless specifically authorized by the Research Project or with written consent from the Data Controllers. The Data Recipient will not transfer the Data outside their Institution without prior written approval from the Data Controllers. If the Data is to be shared with an external collaborator, the collaborator must first enter into a separate Data Access Agreement to obtain access. 13. Security Breach: In case of a security breach resulting from accidental use of Data leading to disclosure, the Data Recipient must report it to the Data Controllers within 72 hours and follow GDPR rules. In case of a non-accidental breach, the Data Recipient must destroy any held Data. 14. Termination: The Data Recipient acknowledges that this agreement will be terminated immediately in the event of any breach by the recipient or upon the termination of the agreement. 15. Dispute Resolution Process: The Data Recipient will make every effort to resolve disputes amicably with the Data Controllers. If a resolution is not reached within 60 days, the matter will be submitted to arbitration, conducted in English unless otherwise agreed, with the arbitration decision being final and binding. 16. Governing Law and Jurisdiction: The Data Recipient agrees that this agreement, along with any related disputes, will be governed by French law and fall under the exclusive jurisdiction of French courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005328 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005316245 bam 6.2 GB
EGAF00005316246 bam 4.6 GB
EGAF00005316247 bam 4.6 GB
EGAF00005316248 bam 4.5 GB
EGAF00005316249 bam 5.5 GB
EGAF00005316250 bam 5.3 GB
EGAF00005316251 bam 5.3 GB
EGAF00005316252 bam 5.9 GB
EGAF00005316253 bam 5.7 GB
EGAF00005316254 bam 6.0 GB
EGAF00005316255 bam 5.0 GB
EGAF00005316256 bam 5.1 GB
EGAF00005316257 bam 5.2 GB
EGAF00005316258 bam 5.3 GB
EGAF00005316259 bam 6.0 GB
EGAF00005316260 bam 5.7 GB
EGAF00005316261 bam 8.3 GB
EGAF00005316262 bam 8.4 GB
EGAF00005316263 bam 5.4 GB
EGAF00005316264 bam 4.2 GB
EGAF00005316265 bam 3.9 GB
EGAF00005316266 bam 3.5 GB
EGAF00005316267 bam 9.1 GB
EGAF00005316268 bam 9.9 GB
EGAF00005316269 bam 4.6 GB
EGAF00005316270 bam 8.4 GB
EGAF00005316271 bam 3.7 GB
EGAF00005316272 bam 3.6 GB
EGAF00005316273 bam 4.7 GB
EGAF00005316274 bam 8.4 GB
EGAF00005316275 bam 2.7 GB
EGAF00005316276 bam 8.7 GB
EGAF00005316277 bam 8.7 GB
EGAF00005316278 bam 5.4 GB
EGAF00005316279 bam 4.6 GB
EGAF00005316280 bam 4.2 GB
EGAF00005316281 bam 5.0 GB
EGAF00005316282 bam 5.1 GB
EGAF00005316283 bam 5.2 GB
EGAF00005316284 bam 4.7 GB
EGAF00005316285 bam 4.5 GB
EGAF00005316286 bam 5.2 GB
EGAF00005316287 bam 4.8 GB
EGAF00005316288 bam 127.9 MB
EGAF00005316289 bam 112.8 MB
EGAF00005316290 bam 118.7 MB
EGAF00005316291 bam 144.8 MB
EGAF00005316292 bam 123.7 MB
EGAF00005316293 bam 101.6 MB
EGAF00005316294 bam 101.8 MB
EGAF00005316295 bam 123.0 MB
EGAF00005316296 bam 142.9 MB
EGAF00005316297 bam 132.7 MB
EGAF00005316298 bam 143.6 MB
EGAF00005316299 bam 110.7 MB
EGAF00005316300 bam 114.6 MB
EGAF00005316301 bam 118.6 MB
EGAF00005316302 bam 143.8 MB
EGAF00005316303 bam 142.6 MB
EGAF00005316304 bam 110.4 MB
EGAF00005316305 bam 202.4 MB
EGAF00005316306 bam 102.8 MB
EGAF00005316307 bam 122.0 MB
EGAF00005316308 bam 160.4 MB
EGAF00005316309 bam 131.7 MB
EGAF00005316310 bam 181.8 MB
EGAF00005316311 bam 252.4 MB
EGAF00005316312 bam 123.7 MB
EGAF00005316313 bam 152.0 MB
EGAF00005316314 bam 99.2 MB
EGAF00005316315 bam 207.4 MB
EGAF00005316316 bam 232.1 MB
EGAF00005316317 bam 126.6 MB
EGAF00005316318 bam 38.2 MB
EGAF00005316319 bam 100.7 MB
EGAF00005316320 bam 326.7 MB
EGAF00005316321 bam 265.6 MB
EGAF00005316322 bam 32.9 MB
EGAF00005316323 bam 242.0 MB
EGAF00005316324 bam 253.0 MB
EGAF00005316325 bam 245.3 MB
EGAF00005316326 bam 202.2 MB
EGAF00005316327 bam 255.7 MB
EGAF00005316328 bam 273.3 MB
EGAF00005316329 bam 217.4 MB
EGAF00005316330 bam 249.5 MB
EGAF00005316331 bam 98.3 MB
EGAF00005316332 bam 283.4 MB
EGAF00005316333 bam 314.3 MB
EGAF00005316334 bam 283.3 MB
EGAF00005316335 bam 273.4 MB
EGAF00005316336 bam 128.4 MB
EGAF00005316337 bam 95.5 MB
EGAF00005316338 bam 50.9 MB
EGAF00005316339 bam 125.3 MB
EGAF00005316340 bam 95.3 MB
EGAF00005316341 bam 103.7 MB
EGAF00005316342 bam 120.7 MB
EGAF00005316343 bam 121.7 MB
EGAF00005316344 bam 93.3 MB
EGAF00005316345 bam 74.6 MB
EGAF00005316346 bam 134.1 MB
EGAF00005316347 bam 140.2 MB
EGAF00005316348 bam 111.5 MB
EGAF00005316349 bam 107.9 MB
EGAF00005316350 bam 120.7 MB
EGAF00005316351 bam 106.5 MB
EGAF00005316352 bam 101.5 MB
EGAF00005316353 bam 109.6 MB
EGAF00005316354 bam 128.3 MB
EGAF00005316355 bam 126.1 MB
EGAF00005316356 bam 117.7 MB
EGAF00005316357 bam 140.3 MB
EGAF00005316358 bam 117.4 MB
EGAF00005316359 bam 137.1 MB
EGAF00005316360 bam 148.2 MB
EGAF00005316361 bam 120.8 MB
EGAF00005316362 bam 88.0 MB
EGAF00005316363 bam 120.6 MB
EGAF00005316364 bam 111.8 MB
EGAF00005316365 bam 114.0 MB
EGAF00005316366 bam 141.0 MB
EGAF00005316367 bam 144.1 MB
EGAF00005316368 bam 148.5 MB
EGAF00005316369 bam 99.9 MB
125 Files (253.0 GB)