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Multi-site tumor sampling highlights molecular intra-tumor heterogeneity in malignant pleural mesothelioma

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FunGeST - Functional Genomics from cancer research to personalized medicine

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets (details of which are set out in Appendix I) to which the Data Recipient has requested access. The Data Recipient agrees to be bound by these terms and conditions. Definitions GDPR: This DAA makes both parties compliant with the Regulation (EU) 2016/679 of the European Parliament and of the Council, that is, the General Data Protection Regulation (herein referred to as the ‘GDPR’). Data: Refers to managed controlled access datasets (the Data). Under this Agreement, the Data is pseudonymised. Data Access/Transfer: Refers to an Institution’s right to request access to the Data and retrieve them from the Data Controller’s Institution upon approval of this hDAA by the corresponding DAC within the Data Controller’s Institution. Data Handling: Refers to an Institution’s ability to analyse and manipulate the Data within its own computer network. Data Controller(s): Refers to an Institution, responsible for the generation of the Data and its pseudonymisation. A key-code permitting relinkage to Data Subjects is kept by the Data Controller(s). Data Subject: Refers to any individual who is the source of any Data covered by this Agreement. Data Recipient (‘You’): Refers to the Institution who requests Access to the Data through this Agreement. Authorised Personnel: The individual(s) at the Institution requesting Access to the Data. Research Project: The Project for which You have requested Access to the Data. Publications: Refers, without limitation, to any and all articles published in print journals, electronic journals, reviews, books, posters, and other written and verbal presentations of Research that have been accepted by peer review. FunGeST: This DAA was written for the FunGeST functional genomics projects headed at the CRC (Centre de recherche des Cordeliers, Paris, France) 1. You, the Data Recipient, agree to only use the Data for the Purpose of the Project, for Research Purposes only and not in any profit-making activities. You further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I; 2. You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. You undertake not to use or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. Without prejudice to the generality of the foregoing, you agree to use at least the measures set out in Appendix I to protect these Data; 3. You agree not to attempt to identify Data Subjects; 4. You agree not to link or combine the Data to other information or archived data available in a way that could re-identify the Data Subjects, even if access to that data has been formally granted to you or is freely available without restriction. 5. You and your Authorised Personnel agree to take into consideration any usage restrictions (if any), stemming from consent, i.e. the appropriate lawful basis for processing the Data, as well as any usage restrictions stemming from any applicable internal policies of your Institution; 6. You agree that in handling this Data You will follow an up-to-date information technology (IT) policy that must include, at a minimum, the following items: a. Logging and auditing of Access to the Data and to the computer network; b. Password protection to computer network and/or strong data encryption; c. Virus and malware protection to computers on the computer network; d. Secure backup procedure; 7. You acknowledge that Access to the Data is granted for the duration of the Project described in Section I, and these restrictions are specific to that particular Project. Any utilization of the Data for a different Project will require prior approval through a new Agreement. 8. You recognize that nothing in this Agreement shall operate to transfer to You any intellectual property rights to the Data. 9. You agree not to make intellectual property claims on the Data and not to use intellectual property protection in ways that would prevent or block Access to, or use of, any element of the Data. 10. You can elect to perform further Research that would add intellectual and resource capital to the Data, and decide to obtain intellectual property rights on these downstream discoveries. In this case, You agree to implement licensing policies that will not obstruct further Research, following the Organisation for Economic Co-operation and Development Guidelines. 11. You agree that the Research Project 1) bears no legal responsibility for the accuracy or comprehensiveness of the Data; 2) accepts no liability for indirect, consequential, or incidental damages or losses arising from use of the Data; and 3) bears no responsibility for the further analysis or interpretation of these Data over and above that published by the Controller(s). 12. You agree to hold the Data Subject(s) and Data Controller(s) harmless and to defend and indemnify all these parties against all liabilities, demands, damages, expenses, and losses arising out of Your use for any Purpose of the Data. 13. You agree to a moratorium on publishing global analyses of the dataset until the Data Controller(s) have published their own global analysis or twelve (12) months, the maximum, have passed from the time the Data were deposited, whichever occurs first. You acknowledge that prompt publication or public disclosure of the results of the Research Project is encouraged. You also agree that by publishing Your global analyses of the Data, you will not disclose any results generated from the Data. 14. You agree to acknowledge the contribution of the Data Controller(s) in all oral and written presentations, disclosures, and Publications resulting from all analyses of the Data. 15. You agree to use the Data in Your laboratory. Any Authorised Personnel shall work under Your direct supervision. You agree to distribute a copy of these terms to the Authorised Personnel. 16. You may not transfer any information included in the Data to anyone unless specifically designated in the Research Project, or by prior specific or general written authorisation of the Data Controller(s) responsible for the generation of the original Data in each case. 17. You may not transfer the Data itself to anyone outside the Institution, unless the Controller(s) has (have) approved such transfer and its terms in writing. 18. Should You wish to share the Data with an external collaborator, the external collaborator must complete a separate Data Access Agreement. 19. You shall ensure that ‘all’ who have Access to the Data, namely You and Your Authorised Personnel, will be listed out, and are made aware and be bound by the terms of this Agreement. You remain solely and fully responsible for Your Authorised Personnel’s non-compliance with the provision of the Agreement and/or applicable laws. 20. In case of a breach of security resulting from ‘accidental’ use of Data by You and Your Authorised Personnel, which leads to disclosure of Data, then You must report this to Data Controller(s) within 72 hours maximum, and follow any relevant rule as provided by the GDPR. 21. In case of a ‘non-accidental or minor’ breach of DAA by You You will further be required to destroy any Data held. 22. You accept that this Agreement will terminate immediately upon ‘any’ breach by You, or its termination (see Section I). 23. You endeavour to settle any dispute with the Data Controller(s) amicably. If you are unable to reach an Agreement, you will meet and negotiate in good faith in an effort to resolve the issue. If the issue has not been resolved within a reasonable period (e.g. 30 calendar days), you are both entitled to submit it for resolution by an arbitrator. 24. Further, the language of the proceedings will be ‘English’ if not otherwise agreed. The award of the arbitration will be final and binding upon the parties concerned. 25. This Agreement (and any dispute, controversy, proceedings, or claim of whatever nature arising out of it or its formation) shall be interpreted, governed by and construed in accordance with the Laws of France, and shall be subject to the exclusive jurisdiction of the French Courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005328 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00005316245 bam 6.2 GB
EGAF00005316246 bam 4.6 GB
EGAF00005316247 bam 4.6 GB
EGAF00005316248 bam 4.5 GB
EGAF00005316249 bam 5.5 GB
EGAF00005316250 bam 5.3 GB
EGAF00005316251 bam 5.3 GB
EGAF00005316252 bam 5.9 GB
EGAF00005316253 bam 5.7 GB
EGAF00005316254 bam 6.0 GB
EGAF00005316255 bam 5.0 GB
EGAF00005316256 bam 5.1 GB
EGAF00005316257 bam 5.2 GB
EGAF00005316258 bam 5.3 GB
EGAF00005316259 bam 6.0 GB
EGAF00005316260 bam 5.7 GB
EGAF00005316261 bam 8.3 GB
EGAF00005316262 bam 8.4 GB
EGAF00005316263 bam 5.4 GB
EGAF00005316264 bam 4.2 GB
EGAF00005316265 bam 3.9 GB
EGAF00005316266 bam 3.5 GB
EGAF00005316267 bam 9.1 GB
EGAF00005316268 bam 9.9 GB
EGAF00005316269 bam 4.6 GB
EGAF00005316270 bam 8.4 GB
EGAF00005316271 bam 3.7 GB
EGAF00005316272 bam 3.6 GB
EGAF00005316273 bam 4.7 GB
EGAF00005316274 bam 8.4 GB
EGAF00005316275 bam 2.7 GB
EGAF00005316276 bam 8.7 GB
EGAF00005316277 bam 8.7 GB
EGAF00005316278 bam 5.4 GB
EGAF00005316279 bam 4.6 GB
EGAF00005316280 bam 4.2 GB
EGAF00005316281 bam 5.0 GB
EGAF00005316282 bam 5.1 GB
EGAF00005316283 bam 5.2 GB
EGAF00005316284 bam 4.7 GB
EGAF00005316285 bam 4.5 GB
EGAF00005316286 bam 5.2 GB
EGAF00005316287 bam 4.8 GB
EGAF00005316288 bam 127.9 MB
EGAF00005316289 bam 112.8 MB
EGAF00005316290 bam 118.7 MB
EGAF00005316291 bam 144.8 MB
EGAF00005316292 bam 123.7 MB
EGAF00005316293 bam 101.6 MB
EGAF00005316294 bam 101.8 MB
EGAF00005316295 bam 123.0 MB
EGAF00005316296 bam 142.9 MB
EGAF00005316297 bam 132.7 MB
EGAF00005316298 bam 143.6 MB
EGAF00005316299 bam 110.7 MB
EGAF00005316300 bam 114.6 MB
EGAF00005316301 bam 118.6 MB
EGAF00005316302 bam 143.8 MB
EGAF00005316303 bam 142.6 MB
EGAF00005316304 bam 110.4 MB
EGAF00005316305 bam 202.4 MB
EGAF00005316306 bam 102.8 MB
EGAF00005316307 bam 122.0 MB
EGAF00005316308 bam 160.4 MB
EGAF00005316309 bam 131.7 MB
EGAF00005316310 bam 181.8 MB
EGAF00005316311 bam 252.4 MB
EGAF00005316312 bam 123.7 MB
EGAF00005316313 bam 152.0 MB
EGAF00005316314 bam 99.2 MB
EGAF00005316315 bam 207.4 MB
EGAF00005316316 bam 232.1 MB
EGAF00005316317 bam 126.6 MB
EGAF00005316318 bam 38.2 MB
EGAF00005316319 bam 100.7 MB
EGAF00005316320 bam 326.7 MB
EGAF00005316321 bam 265.6 MB
EGAF00005316322 bam 32.9 MB
EGAF00005316323 bam 242.0 MB
EGAF00005316324 bam 253.0 MB
EGAF00005316325 bam 245.3 MB
EGAF00005316326 bam 202.2 MB
EGAF00005316327 bam 255.7 MB
EGAF00005316328 bam 273.3 MB
EGAF00005316329 bam 217.4 MB
EGAF00005316330 bam 249.5 MB
EGAF00005316331 bam 98.3 MB
EGAF00005316332 bam 283.4 MB
EGAF00005316333 bam 314.3 MB
EGAF00005316334 bam 283.3 MB
EGAF00005316335 bam 273.4 MB
EGAF00005316336 bam 128.4 MB
EGAF00005316337 bam 95.5 MB
EGAF00005316338 bam 50.9 MB
EGAF00005316339 bam 125.3 MB
EGAF00005316340 bam 95.3 MB
EGAF00005316341 bam 103.7 MB
EGAF00005316342 bam 120.7 MB
EGAF00005316343 bam 121.7 MB
EGAF00005316344 bam 93.3 MB
EGAF00005316345 bam 74.6 MB
EGAF00005316346 bam 134.1 MB
EGAF00005316347 bam 140.2 MB
EGAF00005316348 bam 111.5 MB
EGAF00005316349 bam 107.9 MB
EGAF00005316350 bam 120.7 MB
EGAF00005316351 bam 106.5 MB
EGAF00005316352 bam 101.5 MB
EGAF00005316353 bam 109.6 MB
EGAF00005316354 bam 128.3 MB
EGAF00005316355 bam 126.1 MB
EGAF00005316356 bam 117.7 MB
EGAF00005316357 bam 140.3 MB
EGAF00005316358 bam 117.4 MB
EGAF00005316359 bam 137.1 MB
EGAF00005316360 bam 148.2 MB
EGAF00005316361 bam 120.8 MB
EGAF00005316362 bam 88.0 MB
EGAF00005316363 bam 120.6 MB
EGAF00005316364 bam 111.8 MB
EGAF00005316365 bam 114.0 MB
EGAF00005316366 bam 141.0 MB
EGAF00005316367 bam 144.1 MB
EGAF00005316368 bam 148.5 MB
EGAF00005316369 bam 99.9 MB
125 Files (253.0 GB)