About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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WES on tumor DNA and germline DNA in pediatric cancer

This dataset contains whole exome sequencing (WES) data (various enrichment methods) from tumor DNA samples of various pediatric cancer entities. Files are provided in fastq format. Samples were sequenced on a Novaseq6000 or Hiseq2500 (Illumina).

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DAC for the data managed by Institut Curie.

Data requests will be handled by the DAC, where a data-transfer agreement will need to be signed before the data can be transferred.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005429 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00005333200 fastq.gz 6.1 GB Report
EGAF00005333201 fastq.gz 6.1 GB Report
EGAF00005333202 fastq.gz 5.4 GB Report
EGAF00005333203 fastq.gz 5.4 GB Report
EGAF00005333204 fastq.gz 5.9 GB Report
EGAF00005333205 fastq.gz 5.9 GB Report
EGAF00005333206 fastq.gz 5.4 GB Report
EGAF00005333207 fastq.gz 5.6 GB Report
EGAF00005333208 fastq.gz 5.9 GB Report
EGAF00005333209 fastq.gz 6.1 GB Report
EGAF00005333210 fastq.gz 4.7 GB Report
EGAF00005333211 fastq.gz 4.9 GB Report
EGAF00005333212 fastq.gz 5.1 GB Report
EGAF00005333213 fastq.gz 5.2 GB Report
EGAF00005333214 fastq.gz 2.8 GB Report
EGAF00005333215 fastq.gz 3.0 GB Report
EGAF00005333216 fastq.gz 3.4 GB Report
EGAF00005333217 fastq.gz 3.5 GB Report
EGAF00005333218 fastq.gz 814.3 MB Report
EGAF00005333219 fastq.gz 852.1 MB Report
20 Files (92.0 GB)