Whole-exome sequencing of matched blood, primary GBM tumours, and patient-derived organoids

Whole-exome sequencing (~250X coverage) of primary GBM tumours and matched patient-derived organoids and normal blood. Samples from two spatially distinct regions of seven tumours from five patients (five primary, two recurrent).

29 samples
DAC: EGAC00000000011
Technology: Illumina HiSeq 2500

Access Policy1 Study Files

Metadata

Request Access

RS DUO:0000012 (version: 2021-02-23)research specific restrictionsThis data use modifier indicates that use is limited to studies of a certain research type.
RU DUO:0000014 (version: 2019-01-07)research use onlyThis data use limitation indicates that use is limited to research purposes (e.g., does not include its use in clinical care).
TS DUO:0000025 (version: 2021-02-23)time limit on useThis data use modifier indicates that use is approved for a specific number of months.
PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.

BC Cancer, part of the Provincial Health Services Authority - Data Access Policy

Access to this data is controlled. There are a number of steps that a researcher must take to obtain access to this data, including execution of a Data Access Agreement between the institutions. The process is overseen by the Technology Development Office; please contact our general email address TDOadmin@phsa.ca. Please only click the "request data" button on the EGA website after a Data Access Agreement is fully executed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001005227	Single-cell landscapes of primary glioblastomas and matched organoids and cell lines reveal variable retention of inter- and intra-tumor heterogeneity	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00005403588	fastq.gz	4.4 GB
EGAF00005403589	fastq.gz	4.5 GB
EGAF00005403590	fastq.gz	4.3 GB
EGAF00005403591	fastq.gz	4.5 GB
EGAF00005403592	fastq.gz	4.4 GB
EGAF00005403593	fastq.gz	4.4 GB
EGAF00005403594	fastq.gz	3.3 GB
EGAF00005403595	fastq.gz	3.3 GB
EGAF00005403596	fastq.gz	4.6 GB
EGAF00005403597	fastq.gz	4.7 GB
EGAF00005403598	fastq.gz	5.1 GB
EGAF00005403599	fastq.gz	5.2 GB
EGAF00005403600	fastq.gz	4.4 GB
EGAF00005403601	fastq.gz	4.4 GB
EGAF00005403602	fastq.gz	4.4 GB
EGAF00005403603	fastq.gz	4.5 GB
EGAF00005403604	fastq.gz	4.3 GB
EGAF00005403605	fastq.gz	4.3 GB
EGAF00005403606	fastq.gz	3.3 GB
EGAF00005403607	fastq.gz	3.3 GB
EGAF00005403608	fastq.gz	4.6 GB
EGAF00005403609	fastq.gz	4.6 GB
EGAF00005403610	fastq.gz	5.0 GB
EGAF00005403611	fastq.gz	5.1 GB
EGAF00005403612	fastq.gz	4.8 GB
EGAF00005403613	fastq.gz	4.9 GB
EGAF00005403614	fastq.gz	4.6 GB
EGAF00005403615	fastq.gz	4.7 GB
EGAF00005403616	fastq.gz	4.6 GB
EGAF00005403617	fastq.gz	4.8 GB
EGAF00005403618	fastq.gz	4.5 GB
EGAF00005403619	fastq.gz	4.6 GB
EGAF00005403620	fastq.gz	4.2 GB
EGAF00005403621	fastq.gz	4.2 GB
EGAF00005403622	fastq.gz	4.6 GB
EGAF00005403623	fastq.gz	4.7 GB
EGAF00005403624	fastq.gz	4.8 GB
EGAF00005403625	fastq.gz	4.9 GB
EGAF00005403626	fastq.gz	4.6 GB
EGAF00005403627	fastq.gz	4.5 GB
EGAF00005403628	fastq.gz	4.5 GB
EGAF00005403629	fastq.gz	4.7 GB
EGAF00005403630	fastq.gz	4.4 GB
EGAF00005403631	fastq.gz	4.6 GB
EGAF00005403632	fastq.gz	4.2 GB
EGAF00005403633	fastq.gz	4.2 GB
EGAF00005403634	fastq.gz	4.5 GB
EGAF00005403635	fastq.gz	4.6 GB
EGAF00005403636	fastq.gz	4.7 GB
EGAF00005403637	fastq.gz	4.8 GB
EGAF00005403638	fastq.gz	4.8 GB
EGAF00005403639	fastq.gz	4.9 GB
EGAF00005403640	fastq.gz	4.7 GB
EGAF00005403641	fastq.gz	4.8 GB
EGAF00005403642	fastq.gz	4.3 GB
EGAF00005403643	fastq.gz	4.4 GB
EGAF00005403644	fastq.gz	4.7 GB
EGAF00005403645	fastq.gz	4.8 GB
EGAF00005403646	fastq.gz	4.4 GB
EGAF00005403647	fastq.gz	4.5 GB
EGAF00005403648	fastq.gz	4.9 GB
EGAF00005403649	fastq.gz	5.0 GB
EGAF00005403650	fastq.gz	5.0 GB
EGAF00005403651	fastq.gz	5.0 GB
EGAF00005403652	fastq.gz	4.9 GB
EGAF00005403653	fastq.gz	5.1 GB
EGAF00005403654	fastq.gz	4.5 GB
EGAF00005403655	fastq.gz	4.5 GB
EGAF00005403656	fastq.gz	4.9 GB
EGAF00005403657	fastq.gz	4.9 GB
EGAF00005403658	fastq.gz	4.5 GB
EGAF00005403659	fastq.gz	4.6 GB
EGAF00005403660	fastq.gz	4.6 GB
EGAF00005403661	fastq.gz	4.7 GB
EGAF00005403662	fastq.gz	4.0 GB
EGAF00005403663	fastq.gz	4.1 GB
EGAF00005403664	fastq.gz	4.9 GB
EGAF00005403665	fastq.gz	5.1 GB
EGAF00005403666	fastq.gz	4.8 GB
EGAF00005403667	fastq.gz	4.9 GB
EGAF00005403668	fastq.gz	4.9 GB
EGAF00005403669	fastq.gz	5.1 GB
EGAF00005403670	fastq.gz	4.7 GB
EGAF00005403671	fastq.gz	4.8 GB
EGAF00005403672	fastq.gz	4.6 GB
EGAF00005403673	fastq.gz	4.7 GB
EGAF00005403674	fastq.gz	4.1 GB
EGAF00005403675	fastq.gz	4.1 GB
EGAF00005403676	fastq.gz	5.0 GB
EGAF00005403677	fastq.gz	5.1 GB
EGAF00005403678	fastq.gz	4.9 GB
EGAF00005403679	fastq.gz	5.0 GB
EGAF00005403680	fastq.gz	5.0 GB
EGAF00005403681	fastq.gz	5.2 GB
EGAF00005403682	fastq.gz	4.8 GB
EGAF00005403683	fastq.gz	4.9 GB
EGAF00005403684	fastq.gz	5.4 GB
EGAF00005403685	fastq.gz	5.5 GB
EGAF00005403686	fastq.gz	5.2 GB
EGAF00005403687	fastq.gz	5.4 GB
EGAF00005403688	fastq.gz	5.0 GB
EGAF00005403689	fastq.gz	5.1 GB
EGAF00005403690	fastq.gz	5.2 GB
EGAF00005403691	fastq.gz	5.4 GB
EGAF00005403692	fastq.gz	5.6 GB
EGAF00005403693	fastq.gz	5.6 GB
EGAF00005403694	fastq.gz	5.6 GB
EGAF00005403695	fastq.gz	5.7 GB
EGAF00005403696	fastq.gz	5.4 GB
EGAF00005403697	fastq.gz	5.6 GB
EGAF00005403698	fastq.gz	5.2 GB
EGAF00005403699	fastq.gz	5.2 GB
EGAF00005403700	fastq.gz	5.3 GB
EGAF00005403701	fastq.gz	5.6 GB
EGAF00005403702	fastq.gz	5.8 GB
EGAF00005403703	fastq.gz	5.8 GB
116 Files (550.8 GB)