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Single-cell whole-genome sequencing of matched primary GBM tumours and patient-derived organoids

Single-cell whole-genome sequencing of primary GBM tumours and matched patient-derived organoids. Obtained using the 10X Genomics single-cell CNV solution. Samples from two spatially distinct regions of five tumours from three patients (three primary, two recurrent).

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BCCA (BCGSC) data policy

This document refers to the data set which has been submitted to the European Genome Archive (EGA) for the controlled access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by the British Columbia Cancer Agency Branch herein represented by the Technology Development Office of the Provincial Health Services Authority. There are a number of steps that a researcher must take to obtain access to this data and the process is overseen by the Technology Development Office - contact our general email address

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001005227 Other
ID File Type Size Located in
EGAF00005403414 fastq.gz 2.3 GB
EGAF00005403415 fastq.gz 2.5 GB
EGAF00005403416 fastq.gz 2.4 GB
EGAF00005403417 fastq.gz 2.6 GB
EGAF00005403418 fastq.gz 2.1 GB
EGAF00005403419 fastq.gz 2.3 GB
EGAF00005403420 fastq.gz 2.3 GB
EGAF00005403421 fastq.gz 2.5 GB
EGAF00005403422 fastq.gz 3.6 GB
EGAF00005403423 fastq.gz 3.9 GB
EGAF00005403424 fastq.gz 2.3 GB
EGAF00005403425 fastq.gz 2.5 GB
EGAF00005403426 fastq.gz 3.7 GB
EGAF00005403427 fastq.gz 4.0 GB
EGAF00005403428 fastq.gz 2.9 GB
EGAF00005403429 fastq.gz 3.1 GB
EGAF00005403430 fastq.gz 2.3 GB
EGAF00005403431 fastq.gz 2.5 GB
EGAF00005403432 fastq.gz 2.4 GB
EGAF00005403433 fastq.gz 2.6 GB
EGAF00005403434 fastq.gz 2.3 GB
EGAF00005403435 fastq.gz 2.4 GB
EGAF00005403436 fastq.gz 2.4 GB
EGAF00005403437 fastq.gz 2.5 GB
EGAF00005403438 fastq.gz 2.5 GB
EGAF00005403439 fastq.gz 2.6 GB
EGAF00005403440 fastq.gz 2.5 GB
EGAF00005403441 fastq.gz 2.7 GB
EGAF00005403442 fastq.gz 2.6 GB
EGAF00005403443 fastq.gz 2.8 GB
EGAF00005403444 fastq.gz 2.1 GB
EGAF00005403445 fastq.gz 2.2 GB
EGAF00005403446 fastq.gz 2.4 GB
EGAF00005403447 fastq.gz 2.5 GB
EGAF00005403448 fastq.gz 2.5 GB
EGAF00005403449 fastq.gz 2.6 GB
EGAF00005403450 fastq.gz 2.2 GB
EGAF00005403451 fastq.gz 2.3 GB
EGAF00005403452 fastq.gz 2.3 GB
EGAF00005403453 fastq.gz 2.5 GB
EGAF00005403454 fastq.gz 3.6 GB
EGAF00005403455 fastq.gz 3.9 GB
EGAF00005403456 fastq.gz 2.3 GB
EGAF00005403457 fastq.gz 2.5 GB
EGAF00005403458 fastq.gz 3.7 GB
EGAF00005403459 fastq.gz 4.0 GB
EGAF00005403460 fastq.gz 2.9 GB
EGAF00005403461 fastq.gz 3.1 GB
EGAF00005403462 fastq.gz 2.3 GB
EGAF00005403463 fastq.gz 2.5 GB
EGAF00005403464 fastq.gz 2.5 GB
EGAF00005403465 fastq.gz 2.6 GB
EGAF00005403466 fastq.gz 2.3 GB
EGAF00005403467 fastq.gz 2.4 GB
EGAF00005403468 fastq.gz 2.4 GB
EGAF00005403469 fastq.gz 2.6 GB
EGAF00005403470 fastq.gz 2.5 GB
EGAF00005403471 fastq.gz 2.7 GB
EGAF00005403472 fastq.gz 2.5 GB
EGAF00005403473 fastq.gz 2.7 GB
EGAF00005403474 fastq.gz 2.6 GB
EGAF00005403475 fastq.gz 2.8 GB
EGAF00005403476 fastq.gz 2.1 GB
EGAF00005403477 fastq.gz 2.2 GB
EGAF00005403478 fastq.gz 2.4 GB
EGAF00005403479 fastq.gz 2.5 GB
EGAF00005403480 fastq.gz 2.5 GB
EGAF00005403481 fastq.gz 2.6 GB
EGAF00005403482 fastq.gz 2.2 GB
EGAF00005403483 fastq.gz 2.3 GB
EGAF00005403484 fastq.gz 2.3 GB
EGAF00005403485 fastq.gz 2.5 GB
EGAF00005403486 fastq.gz 3.7 GB
EGAF00005403487 fastq.gz 4.0 GB
EGAF00005403488 fastq.gz 2.3 GB
EGAF00005403489 fastq.gz 2.5 GB
EGAF00005403490 fastq.gz 3.7 GB
EGAF00005403491 fastq.gz 4.0 GB
EGAF00005403492 fastq.gz 3.0 GB
EGAF00005403493 fastq.gz 3.2 GB
EGAF00005403494 fastq.gz 2.3 GB
EGAF00005403495 fastq.gz 2.5 GB
EGAF00005403496 fastq.gz 2.5 GB
EGAF00005403497 fastq.gz 2.7 GB
EGAF00005403498 fastq.gz 2.3 GB
EGAF00005403499 fastq.gz 2.5 GB
EGAF00005403500 fastq.gz 2.4 GB
EGAF00005403501 fastq.gz 2.6 GB
EGAF00005403502 fastq.gz 2.5 GB
EGAF00005403503 fastq.gz 2.7 GB
EGAF00005403504 fastq.gz 2.5 GB
EGAF00005403505 fastq.gz 2.7 GB
EGAF00005403506 fastq.gz 2.7 GB
EGAF00005403507 fastq.gz 2.8 GB
EGAF00005403508 fastq.gz 2.1 GB
EGAF00005403509 fastq.gz 2.3 GB
EGAF00005403510 fastq.gz 2.3 GB
EGAF00005403511 fastq.gz 2.4 GB
EGAF00005403512 fastq.gz 2.4 GB
EGAF00005403513 fastq.gz 2.5 GB
EGAF00005403514 fastq.gz 2.1 GB
EGAF00005403515 fastq.gz 2.2 GB
EGAF00005403516 fastq.gz 2.3 GB
EGAF00005403517 fastq.gz 2.4 GB
EGAF00005403518 fastq.gz 3.6 GB
EGAF00005403519 fastq.gz 3.7 GB
EGAF00005403520 fastq.gz 2.3 GB
EGAF00005403521 fastq.gz 2.4 GB
EGAF00005403522 fastq.gz 3.6 GB
EGAF00005403523 fastq.gz 3.8 GB
EGAF00005403524 fastq.gz 2.9 GB
EGAF00005403525 fastq.gz 3.0 GB
EGAF00005403526 fastq.gz 2.3 GB
EGAF00005403527 fastq.gz 2.4 GB
EGAF00005403528 fastq.gz 2.4 GB
EGAF00005403529 fastq.gz 2.5 GB
EGAF00005403530 fastq.gz 2.2 GB
EGAF00005403531 fastq.gz 2.4 GB
EGAF00005403532 fastq.gz 2.4 GB
EGAF00005403533 fastq.gz 2.5 GB
EGAF00005403534 fastq.gz 2.5 GB
EGAF00005403535 fastq.gz 2.6 GB
EGAF00005403536 fastq.gz 2.5 GB
EGAF00005403537 fastq.gz 2.6 GB
EGAF00005403538 fastq.gz 2.6 GB
EGAF00005403539 fastq.gz 2.7 GB
EGAF00005403540 fastq.gz 2.0 GB
EGAF00005403541 fastq.gz 2.2 GB
EGAF00005403542 fastq.gz 7.2 GB
EGAF00005403543 fastq.gz 7.7 GB
EGAF00005403544 fastq.gz 1.1 GB
EGAF00005403545 fastq.gz 1.2 GB
EGAF00005403546 fastq.gz 8.9 GB
EGAF00005403547 fastq.gz 9.6 GB
EGAF00005403548 fastq.gz 3.1 GB
EGAF00005403549 fastq.gz 3.3 GB
EGAF00005403550 fastq.gz 1.1 GB
EGAF00005403551 fastq.gz 1.2 GB
EGAF00005403552 fastq.gz 5.5 GB
EGAF00005403553 fastq.gz 5.9 GB
EGAF00005403554 fastq.gz 7.2 GB
EGAF00005403555 fastq.gz 7.7 GB
EGAF00005403556 fastq.gz 6.1 GB
EGAF00005403557 fastq.gz 6.5 GB
EGAF00005403558 fastq.gz 14.8 GB
EGAF00005403559 fastq.gz 16.3 GB
EGAF00005403560 fastq.gz 2.4 GB
EGAF00005403561 fastq.gz 2.6 GB
EGAF00005403562 fastq.gz 14.5 GB
EGAF00005403563 fastq.gz 16.0 GB
EGAF00005403564 fastq.gz 6.1 GB
EGAF00005403565 fastq.gz 6.7 GB
EGAF00005403566 fastq.gz 2.4 GB
EGAF00005403567 fastq.gz 2.6 GB
EGAF00005403568 fastq.gz 14.8 GB
EGAF00005403569 fastq.gz 16.1 GB
EGAF00005403570 fastq.gz 2.4 GB
EGAF00005403571 fastq.gz 2.6 GB
EGAF00005403572 fastq.gz 14.5 GB
EGAF00005403573 fastq.gz 15.8 GB
EGAF00005403574 fastq.gz 6.1 GB
EGAF00005403575 fastq.gz 6.6 GB
EGAF00005403576 fastq.gz 2.4 GB
EGAF00005403577 fastq.gz 2.6 GB
EGAF00005403578 fastq.gz 14.7 GB
EGAF00005403579 fastq.gz 15.7 GB
EGAF00005403580 fastq.gz 2.4 GB
EGAF00005403581 fastq.gz 2.5 GB
EGAF00005403582 fastq.gz 14.4 GB
EGAF00005403583 fastq.gz 15.5 GB
EGAF00005403584 fastq.gz 6.0 GB
EGAF00005403585 fastq.gz 6.5 GB
EGAF00005403586 fastq.gz 2.4 GB
EGAF00005403587 fastq.gz 2.5 GB
174 Files (673.0 GB)