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Dataset

Cancer and germline exomes consisting of FASTQ reads from melanoma, lung and colon cancer samples

Dataset ID Technology Samples
EGAD00001007950 Illumina HiSeq 4000 17

Dataset Description

Cancer and germline exomes consisting of FASTQ reads from 6 individuals (4 melanoma, 1 lung and 1 colon cancer).
Exome sequencing was performed on illumina with a depth of 100x to 200x.
2 Melanoma datasets contain reads from 2 different tumor regions
2 Melanoma datasets contain reads from 1 tumor region and from a tumor derived cell line
1 Melanoma dataset contains reads from 2 healthy tissues
Colon and lung datasets contain both 1 matched germline-tumor pair

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

CHUV Data Access Committee
Contact person: Michal Bassani-Sternberg
Email: michal [dot] bassani [at] chuv [dot] ch
More details: EGAC00001002246

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